data_6XG5 # _model_server_result.job_id KjQJQoj031dyBkLWvlVbcw _model_server_result.datetime_utc '2024-11-27 22:07:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xg5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6XG5 # _exptl.entry_id 6XG5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.318 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIMETHOPRIM _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6XG5 _cell.length_a 61.809 _cell.length_b 61.809 _cell.length_c 104.63 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XG5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H18 N4 O3' _chem_comp.formula_weight 290.318 _chem_comp.id TOP _chem_comp.mon_nstd_flag . _chem_comp.name TRIMETHOPRIM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 TOP doub 401 n y C1 C8 TOP sing 402 n y C1 H1 TOP sing 403 n n N2 C3 TOP sing 404 n y C3 N4 TOP sing 405 n n C3 N5 TOP doub 406 n y N4 HN41 TOP sing 407 n n N4 HN42 TOP sing 408 n n N5 C6 TOP sing 409 n y C6 N7 TOP sing 410 n n C6 C8 TOP doub 411 n y N7 HN71 TOP sing 412 n n N7 HN72 TOP sing 413 n n C8 C9 TOP sing 414 n n C9 C10 TOP sing 415 n n C9 H91 TOP sing 416 n n C9 H92 TOP sing 417 n n C10 C11 TOP doub 418 n y C10 C21 TOP sing 419 n y C11 C12 TOP sing 420 n y C11 H11 TOP sing 421 n n C12 O13 TOP sing 422 n n C12 C15 TOP doub 423 n y O13 C14 TOP sing 424 n n C14 H141 TOP sing 425 n n C14 H142 TOP sing 426 n n C14 H143 TOP sing 427 n n C15 O16 TOP sing 428 n n C15 C18 TOP sing 429 n y O16 C17 TOP sing 430 n n C17 H171 TOP sing 431 n n C17 H172 TOP sing 432 n n C17 H173 TOP sing 433 n n C18 O19 TOP sing 434 n n C18 C21 TOP doub 435 n y O19 C20 TOP sing 436 n n C20 H201 TOP sing 437 n n C20 H202 TOP sing 438 n n C20 H203 TOP sing 439 n n C21 H21 TOP sing 440 n n # _atom_sites.entry_id 6XG5 _atom_sites.fract_transf_matrix[1][1] 0.016179 _atom_sites.fract_transf_matrix[1][2] 0.009341 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018682 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009557 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 301 301 NDP NDP . C 3 GOL A 1 302 501 GOL GOL . D 4 TOP A 1 303 601 TOP TOP . E 5 CL A 1 304 2 CL CL . F 6 HOH A 1 401 40 HOH HOH . F 6 HOH A 2 402 123 HOH HOH . F 6 HOH A 3 403 15 HOH HOH . F 6 HOH A 4 404 133 HOH HOH . F 6 HOH A 5 405 132 HOH HOH . F 6 HOH A 6 406 129 HOH HOH . F 6 HOH A 7 407 72 HOH HOH . F 6 HOH A 8 408 17 HOH HOH . F 6 HOH A 9 409 50 HOH HOH . F 6 HOH A 10 410 22 HOH HOH . F 6 HOH A 11 411 54 HOH HOH . F 6 HOH A 12 412 126 HOH HOH . F 6 HOH A 13 413 118 HOH HOH . F 6 HOH A 14 414 78 HOH HOH . F 6 HOH A 15 415 43 HOH HOH . F 6 HOH A 16 416 27 HOH HOH . F 6 HOH A 17 417 8 HOH HOH . F 6 HOH A 18 418 12 HOH HOH . F 6 HOH A 19 419 121 HOH HOH . F 6 HOH A 20 420 96 HOH HOH . F 6 HOH A 21 421 18 HOH HOH . F 6 HOH A 22 422 94 HOH HOH . F 6 HOH A 23 423 81 HOH HOH . F 6 HOH A 24 424 61 HOH HOH . F 6 HOH A 25 425 4 HOH HOH . F 6 HOH A 26 426 105 HOH HOH . F 6 HOH A 27 427 73 HOH HOH . F 6 HOH A 28 428 10 HOH HOH . F 6 HOH A 29 429 108 HOH HOH . F 6 HOH A 30 430 69 HOH HOH . F 6 HOH A 31 431 30 HOH HOH . F 6 HOH A 32 432 13 HOH HOH . F 6 HOH A 33 433 127 HOH HOH . F 6 HOH A 34 434 49 HOH HOH . F 6 HOH A 35 435 35 HOH HOH . F 6 HOH A 36 436 62 HOH HOH . F 6 HOH A 37 437 109 HOH HOH . F 6 HOH A 38 438 124 HOH HOH . F 6 HOH A 39 439 34 HOH HOH . F 6 HOH A 40 440 46 HOH HOH . F 6 HOH A 41 441 1 HOH HOH . F 6 HOH A 42 442 112 HOH HOH . F 6 HOH A 43 443 92 HOH HOH . F 6 HOH A 44 444 47 HOH HOH . F 6 HOH A 45 445 38 HOH HOH . F 6 HOH A 46 446 25 HOH HOH . F 6 HOH A 47 447 97 HOH HOH . F 6 HOH A 48 448 106 HOH HOH . F 6 HOH A 49 449 103 HOH HOH . F 6 HOH A 50 450 28 HOH HOH . F 6 HOH A 51 451 45 HOH HOH . F 6 HOH A 52 452 24 HOH HOH . F 6 HOH A 53 453 65 HOH HOH . F 6 HOH A 54 454 37 HOH HOH . F 6 HOH A 55 455 75 HOH HOH . F 6 HOH A 56 456 16 HOH HOH . F 6 HOH A 57 457 74 HOH HOH . F 6 HOH A 58 458 89 HOH HOH . F 6 HOH A 59 459 113 HOH HOH . F 6 HOH A 60 460 104 HOH HOH . F 6 HOH A 61 461 83 HOH HOH . F 6 HOH A 62 462 86 HOH HOH . F 6 HOH A 63 463 95 HOH HOH . F 6 HOH A 64 464 82 HOH HOH . F 6 HOH A 65 465 68 HOH HOH . F 6 HOH A 66 466 125 HOH HOH . F 6 HOH A 67 467 128 HOH HOH . F 6 HOH A 68 468 6 HOH HOH . F 6 HOH A 69 469 23 HOH HOH . F 6 HOH A 70 470 130 HOH HOH . F 6 HOH A 71 471 85 HOH HOH . F 6 HOH A 72 472 9 HOH HOH . F 6 HOH A 73 473 71 HOH HOH . F 6 HOH A 74 474 60 HOH HOH . F 6 HOH A 75 475 107 HOH HOH . F 6 HOH A 76 476 98 HOH HOH . F 6 HOH A 77 477 2 HOH HOH . F 6 HOH A 78 478 14 HOH HOH . F 6 HOH A 79 479 20 HOH HOH . F 6 HOH A 80 480 31 HOH HOH . F 6 HOH A 81 481 32 HOH HOH . F 6 HOH A 82 482 102 HOH HOH . F 6 HOH A 83 483 57 HOH HOH . F 6 HOH A 84 484 36 HOH HOH . F 6 HOH A 85 485 117 HOH HOH . F 6 HOH A 86 486 42 HOH HOH . F 6 HOH A 87 487 70 HOH HOH . F 6 HOH A 88 488 48 HOH HOH . F 6 HOH A 89 489 3 HOH HOH . F 6 HOH A 90 490 39 HOH HOH . F 6 HOH A 91 491 120 HOH HOH . F 6 HOH A 92 492 7 HOH HOH . F 6 HOH A 93 493 77 HOH HOH . F 6 HOH A 94 494 122 HOH HOH . F 6 HOH A 95 495 116 HOH HOH . F 6 HOH A 96 496 91 HOH HOH . F 6 HOH A 97 497 33 HOH HOH . F 6 HOH A 98 498 84 HOH HOH . F 6 HOH A 99 499 56 HOH HOH . F 6 HOH A 100 500 41 HOH HOH . F 6 HOH A 101 501 114 HOH HOH . F 6 HOH A 102 502 131 HOH HOH . F 6 HOH A 103 503 100 HOH HOH . F 6 HOH A 104 504 11 HOH HOH . F 6 HOH A 105 505 67 HOH HOH . F 6 HOH A 106 506 63 HOH HOH . F 6 HOH A 107 507 21 HOH HOH . F 6 HOH A 108 508 119 HOH HOH . F 6 HOH A 109 509 52 HOH HOH . F 6 HOH A 110 510 29 HOH HOH . F 6 HOH A 111 511 87 HOH HOH . F 6 HOH A 112 512 88 HOH HOH . F 6 HOH A 113 513 134 HOH HOH . F 6 HOH A 114 514 90 HOH HOH . F 6 HOH A 115 515 93 HOH HOH . F 6 HOH A 116 516 79 HOH HOH . F 6 HOH A 117 517 101 HOH HOH . F 6 HOH A 118 518 53 HOH HOH . F 6 HOH A 119 519 110 HOH HOH . F 6 HOH A 120 520 51 HOH HOH . F 6 HOH A 121 521 66 HOH HOH . F 6 HOH A 122 522 64 HOH HOH . F 6 HOH A 123 523 55 HOH HOH . F 6 HOH A 124 524 26 HOH HOH . F 6 HOH A 125 525 44 HOH HOH . F 6 HOH A 126 526 115 HOH HOH . F 6 HOH A 127 527 111 HOH HOH . F 6 HOH A 128 528 99 HOH HOH . F 6 HOH A 129 529 58 HOH HOH . F 6 HOH A 130 530 19 HOH HOH . F 6 HOH A 131 531 59 HOH HOH . F 6 HOH A 132 532 80 HOH HOH . F 6 HOH A 133 533 76 HOH HOH . F 6 HOH A 134 534 5 HOH HOH . F 6 HOH A 135 535 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TOP . . . D 4 -8.292 26.825 18.916 1 11.21 ? C1 TOP 303 A 1 HETATM 2 N N2 TOP . . . D 4 -8.352 26.3 20.153 1 11.14 ? N2 TOP 303 A 1 HETATM 3 C C3 TOP . . . D 4 -8.943 25.091 20.287 1 11.16 ? C3 TOP 303 A 1 HETATM 4 N N4 TOP . . . D 4 -9.011 24.555 21.507 1 11.4 ? N4 TOP 303 A 1 HETATM 5 N N5 TOP . . . D 4 -9.484 24.395 19.274 1 11.3 ? N5 TOP 303 A 1 HETATM 6 C C6 TOP . . . D 4 -9.384 24.918 18.034 1 11.3 ? C6 TOP 303 A 1 HETATM 7 N N7 TOP . . . D 4 -9.903 24.178 17.031 1 11.74 ? N7 TOP 303 A 1 HETATM 8 C C8 TOP . . . D 4 -8.787 26.188 17.788 1 11.22 ? C8 TOP 303 A 1 HETATM 9 C C9 TOP . . . D 4 -8.634 26.756 16.373 1 11.61 ? C9 TOP 303 A 1 HETATM 10 C C10 TOP . . . D 4 -8.117 28.175 16.239 1 12 ? C10 TOP 303 A 1 HETATM 11 C C11 TOP . . . D 4 -6.762 28.472 16.37 1 12.75 ? C11 TOP 303 A 1 HETATM 12 C C12 TOP . . . D 4 -6.305 29.786 16.306 1 13.62 ? C12 TOP 303 A 1 HETATM 13 O O13 TOP . . . D 4 -5.006 30.178 16.488 1 14.89 ? O13 TOP 303 A 1 HETATM 14 C C14 TOP . . . D 4 -4.005 29.161 16.512 1 15.43 ? C14 TOP 303 A 1 HETATM 15 C C15 TOP . . . D 4 -7.204 30.833 16.084 1 13.76 ? C15 TOP 303 A 1 HETATM 16 O O16 TOP . . . D 4 -6.773 32.14 15.951 1 15.12 ? O16 TOP 303 A 1 HETATM 17 C C17 TOP . . . D 4 -6.47 32.82 17.158 1 15.67 ? C17 TOP 303 A 1 HETATM 18 C C18 TOP . . . D 4 -8.55 30.526 15.889 1 13.03 ? C18 TOP 303 A 1 HETATM 19 O O19 TOP . . . D 4 -9.346 31.61 15.669 1 13.76 ? O19 TOP 303 A 1 HETATM 20 C C20 TOP . . . D 4 -10.634 31.385 15.099 1 13.75 ? C20 TOP 303 A 1 HETATM 21 C C21 TOP . . . D 4 -8.999 29.211 15.963 1 12.17 ? C21 TOP 303 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #