data_6XHE
#
_model_server_result.job_id            I1bhKkCPaZmprfaR0g2N6Q 
_model_server_result.datetime_utc      '2024-10-26 12:25:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xhe 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    6XHE 
#
_exptl.entry_id    6XHE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.33 
_cell.angle_gamma         90 
_cell.entry_id            6XHE 
_cell.length_a            101.002 
_cell.length_b            32.795 
_cell.length_c            74.09 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XHE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf3 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf4 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
disulf ? disulf5 B SG CYS 26 B CYS 26 1_555 B SG CYS 84 B CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf6 B SG CYS 40 B CYS 40 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf7 B SG CYS 58 B CYS 58 1_555 B SG CYS 110 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
disulf ? disulf8 B SG CYS 65 B CYS 65 1_555 B SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     6XHE 
_atom_sites.fract_transf_matrix[1][1]    0.009901 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000057 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.030492 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013497 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 AMP A 1 201 201 AMP AMP . 
D 3 V2J B 1 201 201 V2J AJX . 
E 4 HOH A 1 301 32 HOH HOH . 
E 4 HOH A 2 302 8 HOH HOH . 
E 4 HOH A 3 303 83 HOH HOH . 
E 4 HOH A 4 304 27 HOH HOH . 
E 4 HOH A 5 305 30 HOH HOH . 
E 4 HOH A 6 306 44 HOH HOH . 
E 4 HOH A 7 307 52 HOH HOH . 
E 4 HOH A 8 308 4 HOH HOH . 
E 4 HOH A 9 309 41 HOH HOH . 
E 4 HOH A 10 310 3 HOH HOH . 
E 4 HOH A 11 311 2 HOH HOH . 
E 4 HOH A 12 312 45 HOH HOH . 
E 4 HOH A 13 313 68 HOH HOH . 
E 4 HOH A 14 314 49 HOH HOH . 
E 4 HOH A 15 315 79 HOH HOH . 
E 4 HOH A 16 316 53 HOH HOH . 
E 4 HOH A 17 317 99 HOH HOH . 
E 4 HOH A 18 318 34 HOH HOH . 
E 4 HOH A 19 319 46 HOH HOH . 
E 4 HOH A 20 320 50 HOH HOH . 
E 4 HOH A 21 321 81 HOH HOH . 
E 4 HOH A 22 322 40 HOH HOH . 
E 4 HOH A 23 323 5 HOH HOH . 
E 4 HOH A 24 324 29 HOH HOH . 
E 4 HOH A 25 325 33 HOH HOH . 
E 4 HOH A 26 326 84 HOH HOH . 
E 4 HOH A 27 327 51 HOH HOH . 
E 4 HOH A 28 328 21 HOH HOH . 
E 4 HOH A 29 329 16 HOH HOH . 
E 4 HOH A 30 330 9 HOH HOH . 
E 4 HOH A 31 331 62 HOH HOH . 
E 4 HOH A 32 332 48 HOH HOH . 
E 4 HOH A 33 333 28 HOH HOH . 
E 4 HOH A 34 334 69 HOH HOH . 
E 4 HOH A 35 335 54 HOH HOH . 
E 4 HOH A 36 336 42 HOH HOH . 
E 4 HOH A 37 337 22 HOH HOH . 
E 4 HOH A 38 338 82 HOH HOH . 
E 4 HOH A 39 339 25 HOH HOH . 
E 4 HOH A 40 340 101 HOH HOH . 
E 4 HOH A 41 341 6 HOH HOH . 
E 4 HOH A 42 342 96 HOH HOH . 
E 4 HOH A 43 343 94 HOH HOH . 
E 4 HOH A 44 344 43 HOH HOH . 
E 4 HOH A 45 345 95 HOH HOH . 
E 4 HOH A 46 346 26 HOH HOH . 
E 4 HOH A 47 347 80 HOH HOH . 
E 4 HOH A 48 348 1 HOH HOH . 
E 4 HOH A 49 349 97 HOH HOH . 
E 4 HOH A 50 350 78 HOH HOH . 
E 4 HOH A 51 351 23 HOH HOH . 
E 4 HOH A 52 352 37 HOH HOH . 
E 4 HOH A 53 353 38 HOH HOH . 
E 4 HOH A 54 354 93 HOH HOH . 
E 4 HOH A 55 355 65 HOH HOH . 
E 4 HOH A 56 356 47 HOH HOH . 
E 4 HOH A 57 357 15 HOH HOH . 
E 4 HOH A 58 358 72 HOH HOH . 
E 4 HOH A 59 359 20 HOH HOH . 
E 4 HOH A 60 360 70 HOH HOH . 
F 4 HOH B 1 301 89 HOH HOH . 
F 4 HOH B 2 302 102 HOH HOH . 
F 4 HOH B 3 303 19 HOH HOH . 
F 4 HOH B 4 304 60 HOH HOH . 
F 4 HOH B 5 305 64 HOH HOH . 
F 4 HOH B 6 306 58 HOH HOH . 
F 4 HOH B 7 307 98 HOH HOH . 
F 4 HOH B 8 308 76 HOH HOH . 
F 4 HOH B 9 309 12 HOH HOH . 
F 4 HOH B 10 310 57 HOH HOH . 
F 4 HOH B 11 311 61 HOH HOH . 
F 4 HOH B 12 312 17 HOH HOH . 
F 4 HOH B 13 313 91 HOH HOH . 
F 4 HOH B 14 314 18 HOH HOH . 
F 4 HOH B 15 315 56 HOH HOH . 
F 4 HOH B 16 316 13 HOH HOH . 
F 4 HOH B 17 317 14 HOH HOH . 
F 4 HOH B 18 318 7 HOH HOH . 
F 4 HOH B 19 319 31 HOH HOH . 
F 4 HOH B 20 320 90 HOH HOH . 
F 4 HOH B 21 321 55 HOH HOH . 
F 4 HOH B 22 322 87 HOH HOH . 
F 4 HOH B 23 323 66 HOH HOH . 
F 4 HOH B 24 324 86 HOH HOH . 
F 4 HOH B 25 325 36 HOH HOH . 
F 4 HOH B 26 326 92 HOH HOH . 
F 4 HOH B 27 327 75 HOH HOH . 
F 4 HOH B 28 328 77 HOH HOH . 
F 4 HOH B 29 329 59 HOH HOH . 
F 4 HOH B 30 330 67 HOH HOH . 
F 4 HOH B 31 331 100 HOH HOH . 
F 4 HOH B 32 332 35 HOH HOH . 
F 4 HOH B 33 333 74 HOH HOH . 
F 4 HOH B 34 334 88 HOH HOH . 
F 4 HOH B 35 335 85 HOH HOH . 
F 4 HOH B 36 336 73 HOH HOH . 
F 4 HOH B 37 337 63 HOH HOH . 
F 4 HOH B 38 338 71 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . C 2 9.501 -7.567 -34.554 1 109.29 ? P AMP 201 A 1 
HETATM 2 O O1P AMP . . . C 2 8.069 -7.158 -34.853 1 100.33 ? O1P AMP 201 A 1 
HETATM 3 O O2P AMP . . . C 2 9.674 -9.095 -34.46 1 81.43 ? O2P AMP 201 A 1 
HETATM 4 O O3P AMP . . . C 2 10.056 -6.833 -33.34 1 98.4 ? O3P AMP 201 A 1 
HETATM 5 O O5' AMP . . . C 2 10.39 -7.069 -35.839 1 96.64 ? O5' AMP 201 A 1 
HETATM 6 C C5' AMP . . . C 2 10.526 -5.64 -36.14 1 96.48 ? C5' AMP 201 A 1 
HETATM 7 C C4' AMP . . . C 2 11.855 -5.383 -36.818 1 93.39 ? C4' AMP 201 A 1 
HETATM 8 O O4' AMP . . . C 2 11.891 -6.114 -38.068 1 89.68 ? O4' AMP 201 A 1 
HETATM 9 C C3' AMP . . . C 2 12.195 -3.924 -37.176 1 97.61 ? C3' AMP 201 A 1 
HETATM 10 O O3' AMP . . . C 2 13.492 -3.569 -36.705 1 96.35 ? O3' AMP 201 A 1 
HETATM 11 C C2' AMP . . . C 2 12.147 -3.862 -38.711 1 95.53 ? C2' AMP 201 A 1 
HETATM 12 O O2' AMP . . . C 2 13.17 -3.063 -39.27 1 90.61 ? O2' AMP 201 A 1 
HETATM 13 C C1' AMP . . . C 2 12.39 -5.311 -39.116 1 90.65 ? C1' AMP 201 A 1 
HETATM 14 N N9 AMP . . . C 2 11.727 -5.74 -40.348 1 86.29 ? N9 AMP 201 A 1 
HETATM 15 C C8 AMP . . . C 2 12.331 -6.036 -41.553 1 80.12 ? C8 AMP 201 A 1 
HETATM 16 N N7 AMP . . . C 2 11.497 -6.459 -42.471 1 67.45 ? N7 AMP 201 A 1 
HETATM 17 C C5 AMP . . . C 2 10.266 -6.475 -41.82 1 73.53 ? C5 AMP 201 A 1 
HETATM 18 C C6 AMP . . . C 2 8.973 -6.84 -42.246 1 63.74 ? C6 AMP 201 A 1 
HETATM 19 N N6 AMP . . . C 2 8.718 -7.306 -43.461 1 67.47 ? N6 AMP 201 A 1 
HETATM 20 N N1 AMP . . . C 2 7.958 -6.757 -41.349 1 61.46 ? N1 AMP 201 A 1 
HETATM 21 C C2 AMP . . . C 2 8.225 -6.289 -40.122 1 66.61 ? C2 AMP 201 A 1 
HETATM 22 N N3 AMP . . . C 2 9.394 -5.912 -39.607 1 68.63 ? N3 AMP 201 A 1 
HETATM 23 C C4 AMP . . . C 2 10.39 -6.035 -40.512 1 78.28 ? C4 AMP 201 A 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           23 
#