data_6XIW # _model_server_result.job_id 7Ucv6Z2hvx7Ymqog4tugXQ _model_server_result.datetime_utc '2024-10-19 16:36:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xiw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":1810}' # _entry.id 6XIW # _exptl.entry_id 6XIW _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 6 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XIW _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XIW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 L N N ? 6 M N N ? 6 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 207 A CYS 207 1_555 A SG CYS 239 A CYS 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 229 A CYS 229 1_555 A SG CYS 245 A CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 1046 A CYS 1046 1_555 A SG CYS 1057 A CYS 1057 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 1405 A CYS 1405 1_555 A SG CYS 1417 A CYS 1417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 B SG CYS 226 B CYS 226 1_555 B SG CYS 313 B CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 B SG CYS 304 B CYS 304 1_555 B SG CYS 341 B CYS 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 B SG CYS 324 B CYS 324 1_555 B SG CYS 377 B CYS 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 B SG CYS 330 B CYS 330 1_555 B SG CYS 376 B CYS 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 B SG CYS 334 B CYS 334 1_555 B SG CYS 361 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A C MET 286 A MET 286 1_555 A N TYS 287 A TYS 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C TYS 287 A TYS 287 1_555 A N ARG 288 A ARG 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A ND2 ASN 1064 A ASN 1064 1_555 D C1 NAG . A NAG 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6XIW _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 1801 1604 NAG NAG . D 3 NAG A 1 1802 1605 NAG NAG . E 4 PEV A 1 1803 1 PEV PEV . F 4 PEV A 1 1804 2 PEV PEV . G 4 PEV A 1 1805 3 PEV PEV . H 4 PEV A 1 1806 4 PEV PEV . I 4 PEV A 1 1807 5 PEV PEV . J 5 PGV A 1 1808 6 PGV PGV . K 5 PGV A 1 1809 7 PGV PGV . L 6 Y01 A 1 1810 8 Y01 Y01 . M 6 Y01 A 1 1811 9 Y01 Y01 . N 6 Y01 A 1 1812 10 Y01 Y01 . O 7 HOH A 1 1901 5 HOH HOH . O 7 HOH A 2 1902 4 HOH HOH . O 7 HOH A 3 1903 3 HOH HOH . O 7 HOH A 4 1904 1 HOH HOH . P 7 HOH B 1 501 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . L 6 171.974 148.613 134.563 1 55.97 ? CAA Y01 1810 A 1 HETATM 2 C CBA Y01 . . . L 6 173.137 147.669 134.284 1 55.97 ? CBA Y01 1810 A 1 HETATM 3 C CAB Y01 . . . L 6 173.884 147.379 135.577 1 55.97 ? CAB Y01 1810 A 1 HETATM 4 C CAN Y01 . . . L 6 172.583 146.347 133.756 1 55.97 ? CAN Y01 1810 A 1 HETATM 5 C CAJ Y01 . . . L 6 171.415 146.596 132.826 1 55.97 ? CAJ Y01 1810 A 1 HETATM 6 C CAO Y01 . . . L 6 171.264 145.444 131.849 1 55.97 ? CAO Y01 1810 A 1 HETATM 7 C CBB Y01 . . . L 6 171.55 145.977 130.457 1 55.97 ? CBB Y01 1810 A 1 HETATM 8 C CAC Y01 . . . L 6 172.704 146.97 130.513 1 55.97 ? CAC Y01 1810 A 1 HETATM 9 C CBE Y01 . . . L 6 171.878 144.843 129.498 1 55.97 ? CBE Y01 1810 A 1 HETATM 10 C CAP Y01 . . . L 6 171.657 143.455 130.128 1 55.97 ? CAP Y01 1810 A 1 HETATM 11 C CAQ Y01 . . . L 6 170.952 142.587 129.079 1 55.97 ? CAQ Y01 1810 A 1 HETATM 12 C CBG Y01 . . . L 6 171.081 143.397 127.791 1 55.97 ? CBG Y01 1810 A 1 HETATM 13 C CBI Y01 . . . L 6 170.938 144.843 128.29 1 55.97 ? CBI Y01 1810 A 1 HETATM 14 C CAE Y01 . . . L 6 169.504 145.117 128.744 1 55.97 ? CAE Y01 1810 A 1 HETATM 15 C CAU Y01 . . . L 6 171.337 145.774 127.152 1 55.97 ? CAU Y01 1810 A 1 HETATM 16 C CAS Y01 . . . L 6 170.372 145.546 125.998 1 55.97 ? CAS Y01 1810 A 1 HETATM 17 C CBF Y01 . . . L 6 170.367 144.083 125.538 1 55.97 ? CBF Y01 1810 A 1 HETATM 18 C CBD Y01 . . . L 6 170.056 143.146 126.711 1 55.97 ? CBD Y01 1810 A 1 HETATM 19 C CAK Y01 . . . L 6 170.143 141.712 126.254 1 55.97 ? CAK Y01 1810 A 1 HETATM 20 C CAI Y01 . . . L 6 169.181 141.503 125.162 1 55.97 ? CAI Y01 1810 A 1 HETATM 21 C CAZ Y01 . . . L 6 168.805 142.462 124.338 1 55.97 ? CAZ Y01 1810 A 1 HETATM 22 C CAV Y01 . . . L 6 168.073 142.066 123.097 1 55.97 ? CAV Y01 1810 A 1 HETATM 23 C CBH Y01 . . . L 6 169.359 143.872 124.375 1 55.97 ? CBH Y01 1810 A 1 HETATM 24 C CAD Y01 . . . L 6 168.188 144.843 124.523 1 55.97 ? CAD Y01 1810 A 1 HETATM 25 C CAT Y01 . . . L 6 170.101 144.18 123.057 1 55.97 ? CAT Y01 1810 A 1 HETATM 26 C CAR Y01 . . . L 6 169.263 143.81 121.839 1 55.97 ? CAR Y01 1810 A 1 HETATM 27 C CBC Y01 . . . L 6 169.009 142.316 121.928 1 55.97 ? CBC Y01 1810 A 1 HETATM 28 O OAW Y01 . . . L 6 168.456 141.844 120.701 1 55.97 ? OAW Y01 1810 A 1 HETATM 29 C CAY Y01 . . . L 6 167.143 142.155 120.423 1 55.97 ? CAY Y01 1810 A 1 HETATM 30 O OAG Y01 . . . L 6 166.629 143.09 121.011 1 55.97 ? OAG Y01 1810 A 1 HETATM 31 C CAM Y01 . . . L 6 166.483 141.292 119.389 1 55.97 ? CAM Y01 1810 A 1 HETATM 32 C CAL Y01 . . . L 6 165 141.228 119.702 1 55.97 ? CAL Y01 1810 A 1 HETATM 33 C CAX Y01 . . . L 6 164.12 141.674 118.52 1 55.97 ? CAX Y01 1810 A 1 HETATM 34 O OAH Y01 . . . L 6 164.203 142.864 118.169 1 55.97 ? OAH Y01 1810 A 1 HETATM 35 O OAF Y01 . . . L 6 163.375 140.798 117.992 1 55.97 ? OAF Y01 1810 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #