data_6XIW # _model_server_result.job_id V3qkll1QRuZJImMtMYXCKA _model_server_result.datetime_utc '2024-10-19 16:35:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xiw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1812}' # _entry.id 6XIW # _exptl.entry_id 6XIW _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 6 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XIW _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XIW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 L N N ? 6 M N N ? 6 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 207 A CYS 207 1_555 A SG CYS 239 A CYS 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 229 A CYS 229 1_555 A SG CYS 245 A CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 1046 A CYS 1046 1_555 A SG CYS 1057 A CYS 1057 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 1405 A CYS 1405 1_555 A SG CYS 1417 A CYS 1417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 B SG CYS 226 B CYS 226 1_555 B SG CYS 313 B CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 B SG CYS 304 B CYS 304 1_555 B SG CYS 341 B CYS 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 B SG CYS 324 B CYS 324 1_555 B SG CYS 377 B CYS 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 B SG CYS 330 B CYS 330 1_555 B SG CYS 376 B CYS 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 B SG CYS 334 B CYS 334 1_555 B SG CYS 361 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A C MET 286 A MET 286 1_555 A N TYS 287 A TYS 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C TYS 287 A TYS 287 1_555 A N ARG 288 A ARG 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A ND2 ASN 1064 A ASN 1064 1_555 D C1 NAG . A NAG 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6XIW _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 1801 1604 NAG NAG . D 3 NAG A 1 1802 1605 NAG NAG . E 4 PEV A 1 1803 1 PEV PEV . F 4 PEV A 1 1804 2 PEV PEV . G 4 PEV A 1 1805 3 PEV PEV . H 4 PEV A 1 1806 4 PEV PEV . I 4 PEV A 1 1807 5 PEV PEV . J 5 PGV A 1 1808 6 PGV PGV . K 5 PGV A 1 1809 7 PGV PGV . L 6 Y01 A 1 1810 8 Y01 Y01 . M 6 Y01 A 1 1811 9 Y01 Y01 . N 6 Y01 A 1 1812 10 Y01 Y01 . O 7 HOH A 1 1901 5 HOH HOH . O 7 HOH A 2 1902 4 HOH HOH . O 7 HOH A 3 1903 3 HOH HOH . O 7 HOH A 4 1904 1 HOH HOH . P 7 HOH B 1 501 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBE Y01 . . . N 6 105.169 167.095 160.019 1 58.14 ? CBE Y01 1812 A 1 HETATM 2 C CAP Y01 . . . N 6 104.895 165.613 160.346 1 58.14 ? CAP Y01 1812 A 1 HETATM 3 C CAQ Y01 . . . N 6 104.28 164.974 159.093 1 58.14 ? CAQ Y01 1812 A 1 HETATM 4 C CBG Y01 . . . N 6 104.735 165.896 157.966 1 58.14 ? CBG Y01 1812 A 1 HETATM 5 C CBI Y01 . . . N 6 104.598 167.286 158.604 1 58.14 ? CBI Y01 1812 A 1 HETATM 6 C CAE Y01 . . . N 6 103.123 167.693 158.686 1 58.14 ? CAE Y01 1812 A 1 HETATM 7 C CAU Y01 . . . N 6 105.37 168.242 157.725 1 58.14 ? CAU Y01 1812 A 1 HETATM 8 C CAS Y01 . . . N 6 104.633 168.329 156.403 1 58.14 ? CAS Y01 1812 A 1 HETATM 9 C CBF Y01 . . . N 6 104.473 166.963 155.723 1 58.14 ? CBF Y01 1812 A 1 HETATM 10 C CBD Y01 . . . N 6 103.927 165.888 156.68 1 58.14 ? CBD Y01 1812 A 1 HETATM 11 C CAK Y01 . . . N 6 103.996 164.527 155.998 1 58.14 ? CAK Y01 1812 A 1 HETATM 12 C CAI Y01 . . . N 6 103.299 164.591 154.685 1 58.14 ? CAI Y01 1812 A 1 HETATM 13 C CAZ Y01 . . . N 6 103.128 165.713 154.003 1 58.14 ? CAZ Y01 1812 A 1 HETATM 14 C CAV Y01 . . . N 6 102.354 165.686 152.72 1 58.14 ? CAV Y01 1812 A 1 HETATM 15 C CBH Y01 . . . N 6 103.514 167.073 154.519 1 58.14 ? CBH Y01 1812 A 1 HETATM 16 C CAD Y01 . . . N 6 102.234 167.806 154.926 1 58.14 ? CAD Y01 1812 A 1 HETATM 17 C CAT Y01 . . . N 6 104.205 167.851 153.397 1 58.14 ? CAT Y01 1812 A 1 HETATM 18 C CAR Y01 . . . N 6 103.299 167.924 152.175 1 58.14 ? CAR Y01 1812 A 1 HETATM 19 C CBC Y01 . . . N 6 103.1 166.501 151.663 1 58.14 ? CBC Y01 1812 A 1 HETATM 20 O OAW Y01 . . . N 6 102.32 166.567 150.489 1 58.14 ? OAW Y01 1812 A 1 HETATM 21 C CAY Y01 . . . N 6 102.748 165.785 149.446 1 58.14 ? CAY Y01 1812 A 1 HETATM 22 O OAG Y01 . . . N 6 103.543 164.895 149.696 1 58.14 ? OAG Y01 1812 A 1 HETATM 23 C CAM Y01 . . . N 6 102.189 166.12 148.097 1 58.14 ? CAM Y01 1812 A 1 HETATM 24 C CAL Y01 . . . N 6 102.238 164.861 147.247 1 58.14 ? CAL Y01 1812 A 1 HETATM 25 C CAX Y01 . . . N 6 101.253 163.785 147.734 1 58.14 ? CAX Y01 1812 A 1 HETATM 26 O OAH Y01 . . . N 6 100.119 163.78 147.222 1 58.14 ? OAH Y01 1812 A 1 HETATM 27 O OAF Y01 . . . N 6 101.666 162.984 148.623 1 58.14 ? OAF Y01 1812 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #