data_6XL3 # _model_server_result.job_id CAHBnwVK002lHJkPkrbE2w _model_server_result.datetime_utc '2024-10-25 08:17:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xl3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":302}' # _entry.id 6XL3 # _exptl.entry_id 6XL3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6XL3 _cell.length_a 108.911 _cell.length_b 108.911 _cell.length_c 116.074 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XL3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall 'P 3 2"' _symmetry.space_group_name_H-M 'P 3 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,L 1 1,2,3 B,I,J,K,M 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 54.4555 -94.319693 0 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 108.911 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 204 A LYS 204 1_555 C C15 RET . A RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.282 ? covale ? covale2 B NZ LYS 204 B LYS 204 1_555 I C15 RET . B RET 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.537 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6XL3 _atom_sites.fract_transf_matrix[1][1] 0.009182 _atom_sites.fract_transf_matrix[1][2] 0.005301 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010602 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008615 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RET A 1 301 1 RET RET . D 3 CL A 1 302 1 CL CL . E 3 CL A 1 303 3 CL CL . F 4 C14 A 1 304 1 C14 C14 . G 4 C14 A 1 305 2 C14 C14 . H 5 BOG A 1 306 1 BOG BOG . I 2 RET B 1 301 2 RET RET . J 3 CL B 1 302 2 CL CL . K 6 D10 B 1 303 1 D10 D10 . L 7 HOH A 1 401 125 HOH HOH . L 7 HOH A 2 402 123 HOH HOH . L 7 HOH A 3 403 19 HOH HOH . L 7 HOH A 4 404 43 HOH HOH . L 7 HOH A 5 405 124 HOH HOH . L 7 HOH A 6 406 28 HOH HOH . L 7 HOH A 7 407 7 HOH HOH . L 7 HOH A 8 408 4 HOH HOH . L 7 HOH A 9 409 42 HOH HOH . L 7 HOH A 10 410 5 HOH HOH . L 7 HOH A 11 411 27 HOH HOH . L 7 HOH A 12 412 39 HOH HOH . L 7 HOH A 13 413 58 HOH HOH . L 7 HOH A 14 414 126 HOH HOH . L 7 HOH A 15 415 45 HOH HOH . L 7 HOH A 16 416 121 HOH HOH . L 7 HOH A 17 417 20 HOH HOH . L 7 HOH A 18 418 18 HOH HOH . L 7 HOH A 19 419 24 HOH HOH . L 7 HOH A 20 420 117 HOH HOH . L 7 HOH A 21 421 122 HOH HOH . L 7 HOH A 22 422 8 HOH HOH . L 7 HOH A 23 423 127 HOH HOH . M 7 HOH B 1 401 119 HOH HOH . M 7 HOH B 2 402 22 HOH HOH . M 7 HOH B 3 403 48 HOH HOH . M 7 HOH B 4 404 3 HOH HOH . M 7 HOH B 5 405 98 HOH HOH . M 7 HOH B 6 406 25 HOH HOH . M 7 HOH B 7 407 101 HOH HOH . M 7 HOH B 8 408 63 HOH HOH . M 7 HOH B 9 409 26 HOH HOH . M 7 HOH B 10 410 23 HOH HOH . M 7 HOH B 11 411 103 HOH HOH . M 7 HOH B 12 412 65 HOH HOH . M 7 HOH B 13 413 9 HOH HOH . M 7 HOH B 14 414 40 HOH HOH . M 7 HOH B 15 415 6 HOH HOH . M 7 HOH B 16 416 77 HOH HOH . M 7 HOH B 17 417 56 HOH HOH . M 7 HOH B 18 418 31 HOH HOH . M 7 HOH B 19 419 34 HOH HOH . M 7 HOH B 20 420 32 HOH HOH . M 7 HOH B 21 421 102 HOH HOH . M 7 HOH B 22 422 46 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x 48.657 _atom_site.Cartn_y -17.514 _atom_site.Cartn_z -19.871 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 302 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 61 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #