data_6XL4 # _model_server_result.job_id Tc0MabTBt2FgHVRDelWY_g _model_server_result.datetime_utc '2024-11-25 08:47:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xl4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1101}' # _entry.id 6XL4 # _exptl.entry_id 6XL4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.72 _cell.angle_gamma 90 _cell.entry_id 6XL4 _cell.length_a 71.542 _cell.length_b 101.707 _cell.length_c 86.972 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XL4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,L 1 1 B,G,H,M 2 1 C,N 3 1 D,I,J,K,O 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 103 A CYS 797 1_555 E C32 Q6K . A Q6K 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? metalc ? metalc1 D OD1 ASN 148 D ASN 842 1_555 I MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc2 D OD2 ASP 161 D ASP 855 1_555 I MG MG . D MG 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc3 I MG MG . D MG 1101 1_555 J O1G ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc4 I MG MG . D MG 1101 1_555 J O1B ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc5 I MG MG . D MG 1101 1_555 J O2A ANP . D ANP 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc6 I MG MG . D MG 1101 1_555 O O HOH . D HOH 1237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6XL4 _atom_sites.fract_transf_matrix[1][1] 0.013978 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003155 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009832 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011787 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Q6K A 1 1301 1301 Q6K OSI . F 3 NQ1 A 1 1302 1401 NQ1 DDC . G 3 NQ1 B 1 1201 1201 NQ1 DDC . H 2 Q6K B 1 1202 1301 Q6K OSI . I 4 MG D 1 1101 1101 MG MG . J 5 ANP D 1 1102 1102 ANP ANP . K 3 NQ1 D 1 1103 1201 NQ1 DDC . L 6 HOH A 1 1401 51 HOH HOH . L 6 HOH A 2 1402 128 HOH HOH . L 6 HOH A 3 1403 262 HOH HOH . L 6 HOH A 4 1404 161 HOH HOH . L 6 HOH A 5 1405 142 HOH HOH . L 6 HOH A 6 1406 266 HOH HOH . L 6 HOH A 7 1407 156 HOH HOH . L 6 HOH A 8 1408 276 HOH HOH . L 6 HOH A 9 1409 172 HOH HOH . L 6 HOH A 10 1410 139 HOH HOH . L 6 HOH A 11 1411 54 HOH HOH . L 6 HOH A 12 1412 214 HOH HOH . L 6 HOH A 13 1413 24 HOH HOH . L 6 HOH A 14 1414 153 HOH HOH . L 6 HOH A 15 1415 41 HOH HOH . L 6 HOH A 16 1416 110 HOH HOH . L 6 HOH A 17 1417 50 HOH HOH . L 6 HOH A 18 1418 20 HOH HOH . L 6 HOH A 19 1419 76 HOH HOH . L 6 HOH A 20 1420 150 HOH HOH . L 6 HOH A 21 1421 224 HOH HOH . L 6 HOH A 22 1422 104 HOH HOH . L 6 HOH A 23 1423 158 HOH HOH . L 6 HOH A 24 1424 213 HOH HOH . L 6 HOH A 25 1425 53 HOH HOH . L 6 HOH A 26 1426 59 HOH HOH . L 6 HOH A 27 1427 69 HOH HOH . L 6 HOH A 28 1428 36 HOH HOH . L 6 HOH A 29 1429 179 HOH HOH . L 6 HOH A 30 1430 91 HOH HOH . L 6 HOH A 31 1431 270 HOH HOH . L 6 HOH A 32 1432 165 HOH HOH . L 6 HOH A 33 1433 78 HOH HOH . L 6 HOH A 34 1434 71 HOH HOH . L 6 HOH A 35 1435 261 HOH HOH . L 6 HOH A 36 1436 57 HOH HOH . L 6 HOH A 37 1437 55 HOH HOH . L 6 HOH A 38 1438 167 HOH HOH . L 6 HOH A 39 1439 4 HOH HOH . L 6 HOH A 40 1440 151 HOH HOH . L 6 HOH A 41 1441 233 HOH HOH . L 6 HOH A 42 1442 67 HOH HOH . L 6 HOH A 43 1443 152 HOH HOH . L 6 HOH A 44 1444 125 HOH HOH . L 6 HOH A 45 1445 212 HOH HOH . L 6 HOH A 46 1446 129 HOH HOH . L 6 HOH A 47 1447 95 HOH HOH . L 6 HOH A 48 1448 228 HOH HOH . L 6 HOH A 49 1449 226 HOH HOH . L 6 HOH A 50 1450 249 HOH HOH . L 6 HOH A 51 1451 92 HOH HOH . L 6 HOH A 52 1452 256 HOH HOH . L 6 HOH A 53 1453 163 HOH HOH . L 6 HOH A 54 1454 58 HOH HOH . L 6 HOH A 55 1455 255 HOH HOH . L 6 HOH A 56 1456 83 HOH HOH . L 6 HOH A 57 1457 160 HOH HOH . L 6 HOH A 58 1458 159 HOH HOH . L 6 HOH A 59 1459 65 HOH HOH . L 6 HOH A 60 1460 186 HOH HOH . L 6 HOH A 61 1461 193 HOH HOH . L 6 HOH A 62 1462 205 HOH HOH . L 6 HOH A 63 1463 236 HOH HOH . L 6 HOH A 64 1464 211 HOH HOH . L 6 HOH A 65 1465 3 HOH HOH . L 6 HOH A 66 1466 149 HOH HOH . L 6 HOH A 67 1467 231 HOH HOH . L 6 HOH A 68 1468 115 HOH HOH . L 6 HOH A 69 1469 122 HOH HOH . L 6 HOH A 70 1470 187 HOH HOH . L 6 HOH A 71 1471 185 HOH HOH . L 6 HOH A 72 1472 244 HOH HOH . L 6 HOH A 73 1473 247 HOH HOH . L 6 HOH A 74 1474 252 HOH HOH . L 6 HOH A 75 1475 263 HOH HOH . L 6 HOH A 76 1476 234 HOH HOH . L 6 HOH A 77 1477 173 HOH HOH . L 6 HOH A 78 1478 260 HOH HOH . L 6 HOH A 79 1479 86 HOH HOH . M 6 HOH B 1 1301 12 HOH HOH . M 6 HOH B 2 1302 96 HOH HOH . M 6 HOH B 3 1303 235 HOH HOH . M 6 HOH B 4 1304 192 HOH HOH . M 6 HOH B 5 1305 101 HOH HOH . M 6 HOH B 6 1306 189 HOH HOH . M 6 HOH B 7 1307 223 HOH HOH . M 6 HOH B 8 1308 13 HOH HOH . M 6 HOH B 9 1309 217 HOH HOH . M 6 HOH B 10 1310 43 HOH HOH . M 6 HOH B 11 1311 176 HOH HOH . M 6 HOH B 12 1312 178 HOH HOH . M 6 HOH B 13 1313 70 HOH HOH . M 6 HOH B 14 1314 114 HOH HOH . M 6 HOH B 15 1315 18 HOH HOH . M 6 HOH B 16 1316 45 HOH HOH . M 6 HOH B 17 1317 74 HOH HOH . M 6 HOH B 18 1318 123 HOH HOH . M 6 HOH B 19 1319 106 HOH HOH . M 6 HOH B 20 1320 32 HOH HOH . M 6 HOH B 21 1321 77 HOH HOH . M 6 HOH B 22 1322 85 HOH HOH . M 6 HOH B 23 1323 126 HOH HOH . M 6 HOH B 24 1324 73 HOH HOH . M 6 HOH B 25 1325 8 HOH HOH . M 6 HOH B 26 1326 107 HOH HOH . M 6 HOH B 27 1327 145 HOH HOH . M 6 HOH B 28 1328 64 HOH HOH . M 6 HOH B 29 1329 19 HOH HOH . M 6 HOH B 30 1330 98 HOH HOH . M 6 HOH B 31 1331 238 HOH HOH . M 6 HOH B 32 1332 56 HOH HOH . M 6 HOH B 33 1333 81 HOH HOH . M 6 HOH B 34 1334 46 HOH HOH . M 6 HOH B 35 1335 2 HOH HOH . M 6 HOH B 36 1336 72 HOH HOH . M 6 HOH B 37 1337 118 HOH HOH . M 6 HOH B 38 1338 191 HOH HOH . M 6 HOH B 39 1339 264 HOH HOH . M 6 HOH B 40 1340 170 HOH HOH . M 6 HOH B 41 1341 188 HOH HOH . M 6 HOH B 42 1342 23 HOH HOH . M 6 HOH B 43 1343 250 HOH HOH . M 6 HOH B 44 1344 237 HOH HOH . M 6 HOH B 45 1345 87 HOH HOH . M 6 HOH B 46 1346 154 HOH HOH . M 6 HOH B 47 1347 204 HOH HOH . M 6 HOH B 48 1348 109 HOH HOH . M 6 HOH B 49 1349 136 HOH HOH . M 6 HOH B 50 1350 94 HOH HOH . M 6 HOH B 51 1351 119 HOH HOH . M 6 HOH B 52 1352 210 HOH HOH . M 6 HOH B 53 1353 225 HOH HOH . M 6 HOH B 54 1354 171 HOH HOH . M 6 HOH B 55 1355 39 HOH HOH . M 6 HOH B 56 1356 134 HOH HOH . M 6 HOH B 57 1357 177 HOH HOH . M 6 HOH B 58 1358 108 HOH HOH . M 6 HOH B 59 1359 180 HOH HOH . M 6 HOH B 60 1360 202 HOH HOH . M 6 HOH B 61 1361 274 HOH HOH . M 6 HOH B 62 1362 242 HOH HOH . M 6 HOH B 63 1363 267 HOH HOH . M 6 HOH B 64 1364 199 HOH HOH . M 6 HOH B 65 1365 220 HOH HOH . M 6 HOH B 66 1366 243 HOH HOH . N 6 HOH C 1 1101 30 HOH HOH . N 6 HOH C 2 1102 184 HOH HOH . N 6 HOH C 3 1103 60 HOH HOH . N 6 HOH C 4 1104 14 HOH HOH . N 6 HOH C 5 1105 68 HOH HOH . N 6 HOH C 6 1106 1 HOH HOH . N 6 HOH C 7 1107 15 HOH HOH . N 6 HOH C 8 1108 5 HOH HOH . N 6 HOH C 9 1109 138 HOH HOH . N 6 HOH C 10 1110 11 HOH HOH . N 6 HOH C 11 1111 102 HOH HOH . N 6 HOH C 12 1112 97 HOH HOH . N 6 HOH C 13 1113 147 HOH HOH . N 6 HOH C 14 1114 144 HOH HOH . N 6 HOH C 15 1115 40 HOH HOH . N 6 HOH C 16 1116 10 HOH HOH . N 6 HOH C 17 1117 251 HOH HOH . N 6 HOH C 18 1118 111 HOH HOH . N 6 HOH C 19 1119 216 HOH HOH . N 6 HOH C 20 1120 9 HOH HOH . N 6 HOH C 21 1121 16 HOH HOH . N 6 HOH C 22 1122 219 HOH HOH . N 6 HOH C 23 1123 6 HOH HOH . N 6 HOH C 24 1124 7 HOH HOH . N 6 HOH C 25 1125 33 HOH HOH . N 6 HOH C 26 1126 221 HOH HOH . N 6 HOH C 27 1127 245 HOH HOH . N 6 HOH C 28 1128 181 HOH HOH . N 6 HOH C 29 1129 27 HOH HOH . N 6 HOH C 30 1130 82 HOH HOH . N 6 HOH C 31 1131 215 HOH HOH . N 6 HOH C 32 1132 120 HOH HOH . N 6 HOH C 33 1133 48 HOH HOH . N 6 HOH C 34 1134 169 HOH HOH . N 6 HOH C 35 1135 127 HOH HOH . N 6 HOH C 36 1136 17 HOH HOH . N 6 HOH C 37 1137 121 HOH HOH . N 6 HOH C 38 1138 75 HOH HOH . N 6 HOH C 39 1139 248 HOH HOH . N 6 HOH C 40 1140 208 HOH HOH . N 6 HOH C 41 1141 116 HOH HOH . N 6 HOH C 42 1142 47 HOH HOH . N 6 HOH C 43 1143 175 HOH HOH . N 6 HOH C 44 1144 196 HOH HOH . N 6 HOH C 45 1145 29 HOH HOH . N 6 HOH C 46 1146 203 HOH HOH . N 6 HOH C 47 1147 79 HOH HOH . N 6 HOH C 48 1148 155 HOH HOH . N 6 HOH C 49 1149 44 HOH HOH . N 6 HOH C 50 1150 103 HOH HOH . N 6 HOH C 51 1151 112 HOH HOH . N 6 HOH C 52 1152 229 HOH HOH . N 6 HOH C 53 1153 124 HOH HOH . N 6 HOH C 54 1154 137 HOH HOH . N 6 HOH C 55 1155 265 HOH HOH . N 6 HOH C 56 1156 201 HOH HOH . N 6 HOH C 57 1157 268 HOH HOH . N 6 HOH C 58 1158 88 HOH HOH . N 6 HOH C 59 1159 206 HOH HOH . N 6 HOH C 60 1160 232 HOH HOH . N 6 HOH C 61 1161 131 HOH HOH . N 6 HOH C 62 1162 90 HOH HOH . N 6 HOH C 63 1163 239 HOH HOH . N 6 HOH C 64 1164 259 HOH HOH . N 6 HOH C 65 1165 162 HOH HOH . N 6 HOH C 66 1166 209 HOH HOH . N 6 HOH C 67 1167 113 HOH HOH . N 6 HOH C 68 1168 273 HOH HOH . N 6 HOH C 69 1169 254 HOH HOH . O 6 HOH D 1 1201 183 HOH HOH . O 6 HOH D 2 1202 148 HOH HOH . O 6 HOH D 3 1203 240 HOH HOH . O 6 HOH D 4 1204 275 HOH HOH . O 6 HOH D 5 1205 100 HOH HOH . O 6 HOH D 6 1206 38 HOH HOH . O 6 HOH D 7 1207 22 HOH HOH . O 6 HOH D 8 1208 222 HOH HOH . O 6 HOH D 9 1209 130 HOH HOH . O 6 HOH D 10 1210 166 HOH HOH . O 6 HOH D 11 1211 31 HOH HOH . O 6 HOH D 12 1212 117 HOH HOH . O 6 HOH D 13 1213 21 HOH HOH . O 6 HOH D 14 1214 198 HOH HOH . O 6 HOH D 15 1215 105 HOH HOH . O 6 HOH D 16 1216 89 HOH HOH . O 6 HOH D 17 1217 195 HOH HOH . O 6 HOH D 18 1218 35 HOH HOH . O 6 HOH D 19 1219 34 HOH HOH . O 6 HOH D 20 1220 164 HOH HOH . O 6 HOH D 21 1221 93 HOH HOH . O 6 HOH D 22 1222 182 HOH HOH . O 6 HOH D 23 1223 28 HOH HOH . O 6 HOH D 24 1224 62 HOH HOH . O 6 HOH D 25 1225 207 HOH HOH . O 6 HOH D 26 1226 61 HOH HOH . O 6 HOH D 27 1227 52 HOH HOH . O 6 HOH D 28 1228 63 HOH HOH . O 6 HOH D 29 1229 42 HOH HOH . O 6 HOH D 30 1230 66 HOH HOH . O 6 HOH D 31 1231 37 HOH HOH . O 6 HOH D 32 1232 133 HOH HOH . O 6 HOH D 33 1233 227 HOH HOH . O 6 HOH D 34 1234 269 HOH HOH . O 6 HOH D 35 1235 257 HOH HOH . O 6 HOH D 36 1236 26 HOH HOH . O 6 HOH D 37 1237 49 HOH HOH . O 6 HOH D 38 1238 197 HOH HOH . O 6 HOH D 39 1239 246 HOH HOH . O 6 HOH D 40 1240 141 HOH HOH . O 6 HOH D 41 1241 174 HOH HOH . O 6 HOH D 42 1242 190 HOH HOH . O 6 HOH D 43 1243 218 HOH HOH . O 6 HOH D 44 1244 143 HOH HOH . O 6 HOH D 45 1245 258 HOH HOH . O 6 HOH D 46 1246 230 HOH HOH . O 6 HOH D 47 1247 194 HOH HOH . O 6 HOH D 48 1248 146 HOH HOH . O 6 HOH D 49 1249 80 HOH HOH . O 6 HOH D 50 1250 168 HOH HOH . O 6 HOH D 51 1251 25 HOH HOH . O 6 HOH D 52 1252 140 HOH HOH . O 6 HOH D 53 1253 157 HOH HOH . O 6 HOH D 54 1254 84 HOH HOH . O 6 HOH D 55 1255 241 HOH HOH . O 6 HOH D 56 1256 135 HOH HOH . O 6 HOH D 57 1257 132 HOH HOH . O 6 HOH D 58 1258 253 HOH HOH . O 6 HOH D 59 1259 99 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 4 _atom_site.Cartn_x 9.713 _atom_site.Cartn_y 2.184 _atom_site.Cartn_z -43.197 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1101 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 58 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #