data_6XLO # _model_server_result.job_id ZEWdP0nMXhRJIQOwhPFwUg _model_server_result.datetime_utc '2024-12-21 17:22:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xlo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 6XLO # _exptl.entry_id 6XLO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 455.484 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(2-cyanopropan-2-yl)-N-[2-fluoro-4-methyl-5-(7-methyl-8-oxo-7,8-dihydropyrido[2,3-d]pyridazin-3-yl)phenyl]benzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.69 _cell.angle_gamma 90 _cell.entry_id 6XLO _cell.length_a 48.059 _cell.length_b 104.779 _cell.length_c 60.258 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XLO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C26 H22 F N5 O2' _chem_comp.formula_weight 455.484 _chem_comp.id V5J _chem_comp.mon_nstd_flag . _chem_comp.name 3-(2-cyanopropan-2-yl)-N-[2-fluoro-4-methyl-5-(7-methyl-8-oxo-7,8-dihydropyrido[2,3-d]pyridazin-3-yl)phenyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 N13 V5J sing 358 n n N13 N12 V5J sing 359 n n N13 C14 V5J sing 360 n n O15 C14 V5J doub 361 n n N12 C11 V5J doub 362 n n C14 C16 V5J sing 363 n n C11 C10 V5J sing 364 n n C16 C10 V5J doub 365 n y C16 N17 V5J sing 366 n y C10 C9 V5J sing 367 n y N17 C18 V5J doub 368 n y C9 C8 V5J doub 369 n y C18 C8 V5J sing 370 n y C8 C7 V5J sing 371 n n C7 C6 V5J doub 372 n y C7 C2 V5J sing 373 n y C1 C2 V5J sing 374 n n N33 C32 V5J trip 375 n n C6 C5 V5J sing 376 n y C2 C3 V5J doub 377 n y O22 C21 V5J doub 378 n n C32 C29 V5J sing 379 n n C5 N20 V5J sing 380 n n C5 C4 V5J doub 381 n y C21 N20 V5J sing 382 n n C21 C23 V5J sing 383 n n C3 C4 V5J sing 384 n y C28 C23 V5J doub 385 n y C28 C27 V5J sing 386 n y C4 F34 V5J sing 387 n n C23 C24 V5J sing 388 n y C29 C27 V5J sing 389 n n C29 C31 V5J sing 390 n n C29 C30 V5J sing 391 n n C27 C26 V5J doub 392 n y C24 C25 V5J doub 393 n y C26 C25 V5J sing 394 n y C6 H1 V5J sing 395 n n C24 H2 V5J sing 396 n n C26 H3 V5J sing 397 n n C28 H4 V5J sing 398 n n C1 H5 V5J sing 399 n n C1 H6 V5J sing 400 n n C1 H7 V5J sing 401 n n C11 H8 V5J sing 402 n n C18 H9 V5J sing 403 n n C19 H10 V5J sing 404 n n C19 H11 V5J sing 405 n n C19 H12 V5J sing 406 n n C25 H13 V5J sing 407 n n C3 H14 V5J sing 408 n n C30 H15 V5J sing 409 n n C30 H16 V5J sing 410 n n C30 H17 V5J sing 411 n n C31 H18 V5J sing 412 n n C31 H19 V5J sing 413 n n C31 H20 V5J sing 414 n n C9 H21 V5J sing 415 n n N20 H22 V5J sing 416 n n # _atom_sites.entry_id 6XLO _atom_sites.fract_transf_matrix[1][1] 0.020808 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007446 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009544 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017626 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 V5J A 1 801 1 V5J LIG . D 3 IOD A 1 802 1 IOD IOD . E 2 V5J B 1 801 1 V5J LIG . F 4 HOH A 1 901 37 HOH HOH . F 4 HOH A 2 902 46 HOH HOH . F 4 HOH A 3 903 65 HOH HOH . F 4 HOH A 4 904 69 HOH HOH . F 4 HOH A 5 905 17 HOH HOH . F 4 HOH A 6 906 26 HOH HOH . F 4 HOH A 7 907 5 HOH HOH . F 4 HOH A 8 908 14 HOH HOH . F 4 HOH A 9 909 6 HOH HOH . F 4 HOH A 10 910 44 HOH HOH . F 4 HOH A 11 911 3 HOH HOH . F 4 HOH A 12 912 9 HOH HOH . F 4 HOH A 13 913 82 HOH HOH . F 4 HOH A 14 914 38 HOH HOH . F 4 HOH A 15 915 79 HOH HOH . F 4 HOH A 16 916 21 HOH HOH . F 4 HOH A 17 917 96 HOH HOH . F 4 HOH A 18 918 19 HOH HOH . F 4 HOH A 19 919 47 HOH HOH . F 4 HOH A 20 920 36 HOH HOH . F 4 HOH A 21 921 89 HOH HOH . F 4 HOH A 22 922 83 HOH HOH . F 4 HOH A 23 923 86 HOH HOH . F 4 HOH A 24 924 57 HOH HOH . F 4 HOH A 25 925 103 HOH HOH . F 4 HOH A 26 926 43 HOH HOH . F 4 HOH A 27 927 93 HOH HOH . F 4 HOH A 28 928 102 HOH HOH . F 4 HOH A 29 929 106 HOH HOH . F 4 HOH A 30 930 84 HOH HOH . F 4 HOH A 31 931 25 HOH HOH . F 4 HOH A 32 932 92 HOH HOH . F 4 HOH A 33 933 99 HOH HOH . F 4 HOH A 34 934 95 HOH HOH . F 4 HOH A 35 935 98 HOH HOH . F 4 HOH A 36 936 81 HOH HOH . F 4 HOH A 37 937 74 HOH HOH . F 4 HOH A 38 938 101 HOH HOH . F 4 HOH A 39 939 73 HOH HOH . F 4 HOH A 40 940 75 HOH HOH . F 4 HOH A 41 941 100 HOH HOH . F 4 HOH A 42 942 94 HOH HOH . F 4 HOH A 43 943 105 HOH HOH . F 4 HOH A 44 944 70 HOH HOH . G 4 HOH B 1 901 50 HOH HOH . G 4 HOH B 2 902 59 HOH HOH . G 4 HOH B 3 903 60 HOH HOH . G 4 HOH B 4 904 104 HOH HOH . G 4 HOH B 5 905 54 HOH HOH . G 4 HOH B 6 906 49 HOH HOH . G 4 HOH B 7 907 8 HOH HOH . G 4 HOH B 8 908 33 HOH HOH . G 4 HOH B 9 909 15 HOH HOH . G 4 HOH B 10 910 52 HOH HOH . G 4 HOH B 11 911 10 HOH HOH . G 4 HOH B 12 912 35 HOH HOH . G 4 HOH B 13 913 12 HOH HOH . G 4 HOH B 14 914 39 HOH HOH . G 4 HOH B 15 915 91 HOH HOH . G 4 HOH B 16 916 68 HOH HOH . G 4 HOH B 17 917 30 HOH HOH . G 4 HOH B 18 918 32 HOH HOH . G 4 HOH B 19 919 87 HOH HOH . G 4 HOH B 20 920 88 HOH HOH . G 4 HOH B 21 921 31 HOH HOH . G 4 HOH B 22 922 7 HOH HOH . G 4 HOH B 23 923 58 HOH HOH . G 4 HOH B 24 924 64 HOH HOH . G 4 HOH B 25 925 20 HOH HOH . G 4 HOH B 26 926 29 HOH HOH . G 4 HOH B 27 927 90 HOH HOH . G 4 HOH B 28 928 24 HOH HOH . G 4 HOH B 29 929 1 HOH HOH . G 4 HOH B 30 930 85 HOH HOH . G 4 HOH B 31 931 48 HOH HOH . G 4 HOH B 32 932 97 HOH HOH . G 4 HOH B 33 933 77 HOH HOH . G 4 HOH B 34 934 4 HOH HOH . G 4 HOH B 35 935 107 HOH HOH . G 4 HOH B 36 936 78 HOH HOH . G 4 HOH B 37 937 22 HOH HOH . G 4 HOH B 38 938 108 HOH HOH . G 4 HOH B 39 939 67 HOH HOH . G 4 HOH B 40 940 62 HOH HOH . G 4 HOH B 41 941 2 HOH HOH . G 4 HOH B 42 942 40 HOH HOH . G 4 HOH B 43 943 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 V5J . . . C 2 3.872 -24.3 -10.67 1 13.47 ? C4 V5J 801 A 1 HETATM 2 C C5 V5J . . . C 2 2.874 -23.783 -11.505 1 13.22 ? C5 V5J 801 A 1 HETATM 3 C C6 V5J . . . C 2 3.103 -23.688 -12.878 1 12.86 ? C6 V5J 801 A 1 HETATM 4 C C7 V5J . . . C 2 4.309 -24.176 -13.402 1 12.8 ? C7 V5J 801 A 1 HETATM 5 C C8 V5J . . . C 2 4.606 -24.093 -14.863 1 12.87 ? C8 V5J 801 A 1 HETATM 6 C C10 V5J . . . C 2 4.902 -25.133 -17.007 1 13.67 ? C10 V5J 801 A 1 HETATM 7 N N12 V5J . . . C 2 5.164 -26.154 -19.168 1 14.23 ? N12 V5J 801 A 1 HETATM 8 C C21 V5J . . . C 2 0.436 -23.553 -11.252 1 13.95 ? C21 V5J 801 A 1 HETATM 9 C C24 V5J . . . C 2 -0.5 -22.103 -9.438 1 14.82 ? C24 V5J 801 A 1 HETATM 10 C C26 V5J . . . C 2 -2.828 -22.145 -8.906 1 15.2 ? C26 V5J 801 A 1 HETATM 11 C C28 V5J . . . C 2 -1.984 -23.572 -10.65 1 14.7 ? C28 V5J 801 A 1 HETATM 12 C C1 V5J . . . C 2 6.608 -25.248 -13.05 1 12.38 ? C1 V5J 801 A 1 HETATM 13 C C11 V5J . . . C 2 4.832 -26.28 -17.92 1 14.08 ? C11 V5J 801 A 1 HETATM 14 C C14 V5J . . . C 2 5.699 -23.811 -18.931 1 14.22 ? C14 V5J 801 A 1 HETATM 15 C C16 V5J . . . C 2 5.328 -23.875 -17.5 1 13.84 ? C16 V5J 801 A 1 HETATM 16 C C18 V5J . . . C 2 5.052 -22.887 -15.42 1 12.78 ? C18 V5J 801 A 1 HETATM 17 C C19 V5J . . . C 2 5.97 -24.882 -21.104 1 14.38 ? C19 V5J 801 A 1 HETATM 18 C C2 V5J . . . C 2 5.289 -24.714 -12.539 1 12.89 ? C2 V5J 801 A 1 HETATM 19 C C23 V5J . . . C 2 -0.697 -23.068 -10.43 1 14.4 ? C23 V5J 801 A 1 HETATM 20 C C25 V5J . . . C 2 -1.562 -21.629 -8.687 1 15.19 ? C25 V5J 801 A 1 HETATM 21 C C27 V5J . . . C 2 -3.045 -23.117 -9.883 1 15.06 ? C27 V5J 801 A 1 HETATM 22 C C29 V5J . . . C 2 -4.422 -23.723 -10.135 1 14.97 ? C29 V5J 801 A 1 HETATM 23 C C3 V5J . . . C 2 5.07 -24.764 -11.179 1 13.2 ? C3 V5J 801 A 1 HETATM 24 C C30 V5J . . . C 2 -4.473 -25.104 -9.487 1 15.04 ? C30 V5J 801 A 1 HETATM 25 C C31 V5J . . . C 2 -5.569 -22.866 -9.588 1 14.89 ? C31 V5J 801 A 1 HETATM 26 C C32 V5J . . . C 2 -4.632 -23.885 -11.594 1 14.57 ? C32 V5J 801 A 1 HETATM 27 C C9 V5J . . . C 2 4.53 -25.234 -15.668 1 13.06 ? C9 V5J 801 A 1 HETATM 28 F F34 V5J . . . C 2 3.645 -24.417 -9.342 1 13.73 ? F34 V5J 801 A 1 HETATM 29 N N13 V5J . . . C 2 5.6 -24.931 -19.69 1 14.28 ? N13 V5J 801 A 1 HETATM 30 N N17 V5J . . . C 2 5.376 -22.807 -16.693 1 13.35 ? N17 V5J 801 A 1 HETATM 31 N N20 V5J . . . C 2 1.705 -23.333 -10.86 1 13.54 ? N20 V5J 801 A 1 HETATM 32 N N33 V5J . . . C 2 -4.788 -24.001 -12.697 1 14.46 ? N33 V5J 801 A 1 HETATM 33 O O15 V5J . . . C 2 6.108 -22.774 -19.418 1 14.5 ? O15 V5J 801 A 1 HETATM 34 O O22 V5J . . . C 2 0.195 -24.107 -12.302 1 14.18 ? O22 V5J 801 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 34 #