data_6XQ3 # _model_server_result.job_id RPar1pqWhJCDpeLPquZXqQ _model_server_result.datetime_utc '2025-03-26 14:36:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xq3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 6XQ3 # _exptl.entry_id 6XQ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6XQ3 _cell.length_a 102.475 _cell.length_b 102.475 _cell.length_c 101.812 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XQ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall 'P 62' _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,M 1 1,3 B,I,J,K,L,N 1 2,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_454 -y-1,x-y,z-1/3 -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -102.475 0 -33.937333 3 'crystal symmetry operation' 4_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -102.475 0 0 4 'crystal symmetry operation' 5_554 y,-x+y,z-1/3 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 -33.937333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 19 A CYS 38 1_555 A SG CYS 80 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? disulf ? disulf2 A SG CYS 125 A CYS 144 1_555 A SG CYS 189 A CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf3 B SG CYS 19 B CYS 38 1_555 B SG CYS 80 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? disulf ? disulf4 B SG CYS 125 B CYS 144 1_555 B SG CYS 189 B CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 6XQ3 _atom_sites.fract_transf_matrix[1][1] 0.009758 _atom_sites.fract_transf_matrix[1][2] 0.005634 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011268 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009822 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 301 1 ACT ACT . D 2 ACT A 1 302 2 ACT ACT . E 2 ACT A 1 303 7 ACT ACT . F 3 CL A 1 304 1 CL CL . G 4 V6Y A 1 305 1 V6Y PFB . H 4 V6Y A 1 306 5 V6Y PFB . I 2 ACT B 1 301 3 ACT ACT . J 3 CL B 1 302 2 CL CL . K 4 V6Y B 1 303 2 V6Y PFB . L 4 V6Y B 1 304 4 V6Y PFB . M 5 HOH A 1 401 240 HOH HOH . M 5 HOH A 2 402 159 HOH HOH . M 5 HOH A 3 403 184 HOH HOH . M 5 HOH A 4 404 246 HOH HOH . M 5 HOH A 5 405 181 HOH HOH . M 5 HOH A 6 406 194 HOH HOH . M 5 HOH A 7 407 86 HOH HOH . M 5 HOH A 8 408 197 HOH HOH . M 5 HOH A 9 409 209 HOH HOH . M 5 HOH A 10 410 166 HOH HOH . M 5 HOH A 11 411 203 HOH HOH . M 5 HOH A 12 412 198 HOH HOH . M 5 HOH A 13 413 201 HOH HOH . M 5 HOH A 14 414 204 HOH HOH . M 5 HOH A 15 415 241 HOH HOH . M 5 HOH A 16 416 124 HOH HOH . M 5 HOH A 17 417 210 HOH HOH . M 5 HOH A 18 418 260 HOH HOH . M 5 HOH A 19 419 9 HOH HOH . M 5 HOH A 20 420 98 HOH HOH . M 5 HOH A 21 421 174 HOH HOH . M 5 HOH A 22 422 34 HOH HOH . M 5 HOH A 23 423 57 HOH HOH . M 5 HOH A 24 424 118 HOH HOH . M 5 HOH A 25 425 155 HOH HOH . M 5 HOH A 26 426 199 HOH HOH . M 5 HOH A 27 427 84 HOH HOH . M 5 HOH A 28 428 238 HOH HOH . M 5 HOH A 29 429 191 HOH HOH . M 5 HOH A 30 430 76 HOH HOH . M 5 HOH A 31 431 195 HOH HOH . M 5 HOH A 32 432 141 HOH HOH . M 5 HOH A 33 433 107 HOH HOH . M 5 HOH A 34 434 42 HOH HOH . M 5 HOH A 35 435 37 HOH HOH . M 5 HOH A 36 436 152 HOH HOH . M 5 HOH A 37 437 25 HOH HOH . M 5 HOH A 38 438 202 HOH HOH . M 5 HOH A 39 439 40 HOH HOH . M 5 HOH A 40 440 1 HOH HOH . M 5 HOH A 41 441 15 HOH HOH . M 5 HOH A 42 442 190 HOH HOH . M 5 HOH A 43 443 39 HOH HOH . M 5 HOH A 44 444 27 HOH HOH . M 5 HOH A 45 445 130 HOH HOH . M 5 HOH A 46 446 74 HOH HOH . M 5 HOH A 47 447 7 HOH HOH . M 5 HOH A 48 448 35 HOH HOH . M 5 HOH A 49 449 143 HOH HOH . M 5 HOH A 50 450 50 HOH HOH . M 5 HOH A 51 451 122 HOH HOH . M 5 HOH A 52 452 53 HOH HOH . M 5 HOH A 53 453 147 HOH HOH . M 5 HOH A 54 454 48 HOH HOH . M 5 HOH A 55 455 164 HOH HOH . M 5 HOH A 56 456 250 HOH HOH . M 5 HOH A 57 457 259 HOH HOH . M 5 HOH A 58 458 120 HOH HOH . M 5 HOH A 59 459 19 HOH HOH . M 5 HOH A 60 460 97 HOH HOH . M 5 HOH A 61 461 153 HOH HOH . M 5 HOH A 62 462 116 HOH HOH . M 5 HOH A 63 463 70 HOH HOH . M 5 HOH A 64 464 61 HOH HOH . M 5 HOH A 65 465 5 HOH HOH . M 5 HOH A 66 466 60 HOH HOH . M 5 HOH A 67 467 23 HOH HOH . M 5 HOH A 68 468 24 HOH HOH . M 5 HOH A 69 469 3 HOH HOH . M 5 HOH A 70 470 211 HOH HOH . M 5 HOH A 71 471 59 HOH HOH . M 5 HOH A 72 472 171 HOH HOH . M 5 HOH A 73 473 71 HOH HOH . M 5 HOH A 74 474 22 HOH HOH . M 5 HOH A 75 475 17 HOH HOH . M 5 HOH A 76 476 26 HOH HOH . M 5 HOH A 77 477 87 HOH HOH . M 5 HOH A 78 478 88 HOH HOH . M 5 HOH A 79 479 79 HOH HOH . M 5 HOH A 80 480 183 HOH HOH . M 5 HOH A 81 481 81 HOH HOH . M 5 HOH A 82 482 137 HOH HOH . M 5 HOH A 83 483 75 HOH HOH . M 5 HOH A 84 484 63 HOH HOH . M 5 HOH A 85 485 109 HOH HOH . M 5 HOH A 86 486 29 HOH HOH . M 5 HOH A 87 487 243 HOH HOH . M 5 HOH A 88 488 99 HOH HOH . M 5 HOH A 89 489 92 HOH HOH . M 5 HOH A 90 490 52 HOH HOH . M 5 HOH A 91 491 140 HOH HOH . M 5 HOH A 92 492 96 HOH HOH . M 5 HOH A 93 493 47 HOH HOH . M 5 HOH A 94 494 193 HOH HOH . M 5 HOH A 95 495 8 HOH HOH . M 5 HOH A 96 496 13 HOH HOH . M 5 HOH A 97 497 94 HOH HOH . M 5 HOH A 98 498 95 HOH HOH . M 5 HOH A 99 499 113 HOH HOH . M 5 HOH A 100 500 188 HOH HOH . M 5 HOH A 101 501 128 HOH HOH . M 5 HOH A 102 502 252 HOH HOH . M 5 HOH A 103 503 144 HOH HOH . M 5 HOH A 104 504 146 HOH HOH . M 5 HOH A 105 505 170 HOH HOH . M 5 HOH A 106 506 189 HOH HOH . M 5 HOH A 107 507 186 HOH HOH . M 5 HOH A 108 508 182 HOH HOH . M 5 HOH A 109 509 187 HOH HOH . M 5 HOH A 110 510 207 HOH HOH . M 5 HOH A 111 511 121 HOH HOH . M 5 HOH A 112 512 167 HOH HOH . M 5 HOH A 113 513 73 HOH HOH . M 5 HOH A 114 514 200 HOH HOH . M 5 HOH A 115 515 131 HOH HOH . M 5 HOH A 116 516 82 HOH HOH . M 5 HOH A 117 517 185 HOH HOH . M 5 HOH A 118 518 206 HOH HOH . M 5 HOH A 119 519 177 HOH HOH . M 5 HOH A 120 520 196 HOH HOH . M 5 HOH A 121 521 208 HOH HOH . M 5 HOH A 122 522 256 HOH HOH . M 5 HOH A 123 523 108 HOH HOH . M 5 HOH A 124 524 205 HOH HOH . M 5 HOH A 125 525 162 HOH HOH . M 5 HOH A 126 526 126 HOH HOH . M 5 HOH A 127 527 176 HOH HOH . M 5 HOH A 128 528 255 HOH HOH . N 5 HOH B 1 401 192 HOH HOH . N 5 HOH B 2 402 220 HOH HOH . N 5 HOH B 3 403 104 HOH HOH . N 5 HOH B 4 404 230 HOH HOH . N 5 HOH B 5 405 58 HOH HOH . N 5 HOH B 6 406 258 HOH HOH . N 5 HOH B 7 407 244 HOH HOH . N 5 HOH B 8 408 224 HOH HOH . N 5 HOH B 9 409 158 HOH HOH . N 5 HOH B 10 410 216 HOH HOH . N 5 HOH B 11 411 247 HOH HOH . N 5 HOH B 12 412 234 HOH HOH . N 5 HOH B 13 413 123 HOH HOH . N 5 HOH B 14 414 173 HOH HOH . N 5 HOH B 15 415 235 HOH HOH . N 5 HOH B 16 416 257 HOH HOH . N 5 HOH B 17 417 245 HOH HOH . N 5 HOH B 18 418 135 HOH HOH . N 5 HOH B 19 419 239 HOH HOH . N 5 HOH B 20 420 172 HOH HOH . N 5 HOH B 21 421 16 HOH HOH . N 5 HOH B 22 422 105 HOH HOH . N 5 HOH B 23 423 38 HOH HOH . N 5 HOH B 24 424 226 HOH HOH . N 5 HOH B 25 425 41 HOH HOH . N 5 HOH B 26 426 221 HOH HOH . N 5 HOH B 27 427 45 HOH HOH . N 5 HOH B 28 428 225 HOH HOH . N 5 HOH B 29 429 222 HOH HOH . N 5 HOH B 30 430 148 HOH HOH . N 5 HOH B 31 431 229 HOH HOH . N 5 HOH B 32 432 223 HOH HOH . N 5 HOH B 33 433 237 HOH HOH . N 5 HOH B 34 434 44 HOH HOH . N 5 HOH B 35 435 228 HOH HOH . N 5 HOH B 36 436 67 HOH HOH . N 5 HOH B 37 437 10 HOH HOH . N 5 HOH B 38 438 100 HOH HOH . N 5 HOH B 39 439 145 HOH HOH . N 5 HOH B 40 440 80 HOH HOH . N 5 HOH B 41 441 217 HOH HOH . N 5 HOH B 42 442 65 HOH HOH . N 5 HOH B 43 443 46 HOH HOH . N 5 HOH B 44 444 213 HOH HOH . N 5 HOH B 45 445 89 HOH HOH . N 5 HOH B 46 446 151 HOH HOH . N 5 HOH B 47 447 232 HOH HOH . N 5 HOH B 48 448 18 HOH HOH . N 5 HOH B 49 449 43 HOH HOH . N 5 HOH B 50 450 90 HOH HOH . N 5 HOH B 51 451 69 HOH HOH . N 5 HOH B 52 452 68 HOH HOH . N 5 HOH B 53 453 6 HOH HOH . N 5 HOH B 54 454 129 HOH HOH . N 5 HOH B 55 455 233 HOH HOH . N 5 HOH B 56 456 154 HOH HOH . N 5 HOH B 57 457 28 HOH HOH . N 5 HOH B 58 458 83 HOH HOH . N 5 HOH B 59 459 77 HOH HOH . N 5 HOH B 60 460 49 HOH HOH . N 5 HOH B 61 461 31 HOH HOH . N 5 HOH B 62 462 242 HOH HOH . N 5 HOH B 63 463 125 HOH HOH . N 5 HOH B 64 464 11 HOH HOH . N 5 HOH B 65 465 115 HOH HOH . N 5 HOH B 66 466 56 HOH HOH . N 5 HOH B 67 467 85 HOH HOH . N 5 HOH B 68 468 2 HOH HOH . N 5 HOH B 69 469 14 HOH HOH . N 5 HOH B 70 470 150 HOH HOH . N 5 HOH B 71 471 101 HOH HOH . N 5 HOH B 72 472 134 HOH HOH . N 5 HOH B 73 473 12 HOH HOH . N 5 HOH B 74 474 33 HOH HOH . N 5 HOH B 75 475 62 HOH HOH . N 5 HOH B 76 476 64 HOH HOH . N 5 HOH B 77 477 157 HOH HOH . N 5 HOH B 78 478 110 HOH HOH . N 5 HOH B 79 479 161 HOH HOH . N 5 HOH B 80 480 21 HOH HOH . N 5 HOH B 81 481 36 HOH HOH . N 5 HOH B 82 482 54 HOH HOH . N 5 HOH B 83 483 106 HOH HOH . N 5 HOH B 84 484 163 HOH HOH . N 5 HOH B 85 485 93 HOH HOH . N 5 HOH B 86 486 78 HOH HOH . N 5 HOH B 87 487 55 HOH HOH . N 5 HOH B 88 488 251 HOH HOH . N 5 HOH B 89 489 91 HOH HOH . N 5 HOH B 90 490 114 HOH HOH . N 5 HOH B 91 491 227 HOH HOH . N 5 HOH B 92 492 142 HOH HOH . N 5 HOH B 93 493 103 HOH HOH . N 5 HOH B 94 494 20 HOH HOH . N 5 HOH B 95 495 4 HOH HOH . N 5 HOH B 96 496 111 HOH HOH . N 5 HOH B 97 497 160 HOH HOH . N 5 HOH B 98 498 218 HOH HOH . N 5 HOH B 99 499 169 HOH HOH . N 5 HOH B 100 500 127 HOH HOH . N 5 HOH B 101 501 138 HOH HOH . N 5 HOH B 102 502 102 HOH HOH . N 5 HOH B 103 503 30 HOH HOH . N 5 HOH B 104 504 117 HOH HOH . N 5 HOH B 105 505 212 HOH HOH . N 5 HOH B 106 506 231 HOH HOH . N 5 HOH B 107 507 168 HOH HOH . N 5 HOH B 108 508 132 HOH HOH . N 5 HOH B 109 509 254 HOH HOH . N 5 HOH B 110 510 72 HOH HOH . N 5 HOH B 111 511 219 HOH HOH . N 5 HOH B 112 512 249 HOH HOH . N 5 HOH B 113 513 248 HOH HOH . N 5 HOH B 114 514 149 HOH HOH . N 5 HOH B 115 515 139 HOH HOH . N 5 HOH B 116 516 156 HOH HOH . N 5 HOH B 117 517 179 HOH HOH . N 5 HOH B 118 518 178 HOH HOH . N 5 HOH B 119 519 32 HOH HOH . N 5 HOH B 120 520 214 HOH HOH . N 5 HOH B 121 521 180 HOH HOH . N 5 HOH B 122 522 119 HOH HOH . N 5 HOH B 123 523 165 HOH HOH . N 5 HOH B 124 524 133 HOH HOH . N 5 HOH B 125 525 236 HOH HOH . N 5 HOH B 126 526 175 HOH HOH . N 5 HOH B 127 527 66 HOH HOH . N 5 HOH B 128 528 253 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . I 2 -21.19 -37.837 20.371 1 28.9 ? C ACT 301 B 1 HETATM 2 O O ACT . . . I 2 -21.321 -37.987 19.147 1 26.5 ? O ACT 301 B 1 HETATM 3 O OXT ACT . . . I 2 -20.937 -38.728 21.221 1 27.6 ? OXT ACT 301 B 1 HETATM 4 C CH3 ACT . . . I 2 -21.368 -36.384 20.961 1 28.08 ? CH3 ACT 301 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #