data_6XQ6 # _model_server_result.job_id nE4GfpF8iSfxPK7xDPf4Rg _model_server_result.datetime_utc '2024-11-22 20:26:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xq6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6XQ6 # _exptl.entry_id 6XQ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6XQ6 _cell.length_a 101.376 _cell.length_b 101.376 _cell.length_c 104.025 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XQ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall 'P 62' _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,O 1 1,3 B,J,K,L,M,N,P 1 2,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_454 -y-1,x-y,z-1/3 -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -101.376 0 -34.675 3 'crystal symmetry operation' 4_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -101.376 0 0 4 'crystal symmetry operation' 5_554 y,-x+y,z-1/3 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 -34.675 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 19 A CYS 38 1_555 A SG CYS 80 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? disulf ? disulf2 A SG CYS 125 A CYS 144 1_555 A SG CYS 189 A CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf3 B SG CYS 19 B CYS 38 1_555 B SG CYS 80 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? disulf ? disulf4 B SG CYS 125 B CYS 144 1_555 B SG CYS 189 B CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 6XQ6 _atom_sites.fract_transf_matrix[1][1] 0.009864 _atom_sites.fract_transf_matrix[1][2] 0.005695 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009613 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 301 1 ACT ACT . D 2 ACT A 1 302 2 ACT ACT . E 2 ACT A 1 303 6 ACT ACT . F 2 ACT A 1 304 7 ACT ACT . G 3 CL A 1 305 1 CL CL . H 4 V6P A 1 306 301 V6P XYZ . I 4 V6P A 1 307 303 V6P XYZ . J 2 ACT B 1 301 3 ACT ACT . K 2 ACT B 1 302 4 ACT ACT . L 2 ACT B 1 303 5 ACT ACT . M 3 CL B 1 304 2 CL CL . N 4 V6P B 1 305 302 V6P XYZ . O 5 HOH A 1 401 124 HOH HOH . O 5 HOH A 2 402 115 HOH HOH . O 5 HOH A 3 403 145 HOH HOH . O 5 HOH A 4 404 93 HOH HOH . O 5 HOH A 5 405 182 HOH HOH . O 5 HOH A 6 406 17 HOH HOH . O 5 HOH A 7 407 9 HOH HOH . O 5 HOH A 8 408 165 HOH HOH . O 5 HOH A 9 409 144 HOH HOH . O 5 HOH A 10 410 116 HOH HOH . O 5 HOH A 11 411 117 HOH HOH . O 5 HOH A 12 412 132 HOH HOH . O 5 HOH A 13 413 171 HOH HOH . O 5 HOH A 14 414 178 HOH HOH . O 5 HOH A 15 415 13 HOH HOH . O 5 HOH A 16 416 83 HOH HOH . O 5 HOH A 17 417 186 HOH HOH . O 5 HOH A 18 418 55 HOH HOH . O 5 HOH A 19 419 46 HOH HOH . O 5 HOH A 20 420 20 HOH HOH . O 5 HOH A 21 421 78 HOH HOH . O 5 HOH A 22 422 74 HOH HOH . O 5 HOH A 23 423 131 HOH HOH . O 5 HOH A 24 424 27 HOH HOH . O 5 HOH A 25 425 51 HOH HOH . O 5 HOH A 26 426 8 HOH HOH . O 5 HOH A 27 427 89 HOH HOH . O 5 HOH A 28 428 150 HOH HOH . O 5 HOH A 29 429 71 HOH HOH . O 5 HOH A 30 430 25 HOH HOH . O 5 HOH A 31 431 60 HOH HOH . O 5 HOH A 32 432 114 HOH HOH . O 5 HOH A 33 433 38 HOH HOH . O 5 HOH A 34 434 28 HOH HOH . O 5 HOH A 35 435 49 HOH HOH . O 5 HOH A 36 436 12 HOH HOH . O 5 HOH A 37 437 174 HOH HOH . O 5 HOH A 38 438 167 HOH HOH . O 5 HOH A 39 439 154 HOH HOH . O 5 HOH A 40 440 37 HOH HOH . O 5 HOH A 41 441 59 HOH HOH . O 5 HOH A 42 442 187 HOH HOH . O 5 HOH A 43 443 18 HOH HOH . O 5 HOH A 44 444 122 HOH HOH . O 5 HOH A 45 445 34 HOH HOH . O 5 HOH A 46 446 26 HOH HOH . O 5 HOH A 47 447 69 HOH HOH . O 5 HOH A 48 448 192 HOH HOH . O 5 HOH A 49 449 81 HOH HOH . O 5 HOH A 50 450 120 HOH HOH . O 5 HOH A 51 451 48 HOH HOH . O 5 HOH A 52 452 44 HOH HOH . O 5 HOH A 53 453 129 HOH HOH . O 5 HOH A 54 454 169 HOH HOH . O 5 HOH A 55 455 6 HOH HOH . O 5 HOH A 56 456 121 HOH HOH . O 5 HOH A 57 457 53 HOH HOH . O 5 HOH A 58 458 58 HOH HOH . O 5 HOH A 59 459 91 HOH HOH . O 5 HOH A 60 460 88 HOH HOH . O 5 HOH A 61 461 172 HOH HOH . O 5 HOH A 62 462 166 HOH HOH . O 5 HOH A 63 463 134 HOH HOH . O 5 HOH A 64 464 24 HOH HOH . O 5 HOH A 65 465 112 HOH HOH . O 5 HOH A 66 466 10 HOH HOH . O 5 HOH A 67 467 143 HOH HOH . O 5 HOH A 68 468 86 HOH HOH . O 5 HOH A 69 469 126 HOH HOH . O 5 HOH A 70 470 127 HOH HOH . O 5 HOH A 71 471 33 HOH HOH . O 5 HOH A 72 472 110 HOH HOH . O 5 HOH A 73 473 111 HOH HOH . O 5 HOH A 74 474 76 HOH HOH . O 5 HOH A 75 475 125 HOH HOH . O 5 HOH A 76 476 128 HOH HOH . O 5 HOH A 77 477 113 HOH HOH . O 5 HOH A 78 478 147 HOH HOH . O 5 HOH A 79 479 7 HOH HOH . O 5 HOH A 80 480 153 HOH HOH . O 5 HOH A 81 481 170 HOH HOH . O 5 HOH A 82 482 177 HOH HOH . O 5 HOH A 83 483 181 HOH HOH . O 5 HOH A 84 484 152 HOH HOH . O 5 HOH A 85 485 151 HOH HOH . O 5 HOH A 86 486 179 HOH HOH . O 5 HOH A 87 487 160 HOH HOH . O 5 HOH A 88 488 162 HOH HOH . O 5 HOH A 89 489 191 HOH HOH . O 5 HOH A 90 490 185 HOH HOH . O 5 HOH A 91 491 77 HOH HOH . O 5 HOH A 92 492 164 HOH HOH . O 5 HOH A 93 493 54 HOH HOH . O 5 HOH A 94 494 90 HOH HOH . O 5 HOH A 95 495 103 HOH HOH . O 5 HOH A 96 496 21 HOH HOH . O 5 HOH A 97 497 79 HOH HOH . P 5 HOH B 1 401 104 HOH HOH . P 5 HOH B 2 402 94 HOH HOH . P 5 HOH B 3 403 1 HOH HOH . P 5 HOH B 4 404 183 HOH HOH . P 5 HOH B 5 405 133 HOH HOH . P 5 HOH B 6 406 142 HOH HOH . P 5 HOH B 7 407 84 HOH HOH . P 5 HOH B 8 408 102 HOH HOH . P 5 HOH B 9 409 106 HOH HOH . P 5 HOH B 10 410 15 HOH HOH . P 5 HOH B 11 411 109 HOH HOH . P 5 HOH B 12 412 36 HOH HOH . P 5 HOH B 13 413 155 HOH HOH . P 5 HOH B 14 414 85 HOH HOH . P 5 HOH B 15 415 146 HOH HOH . P 5 HOH B 16 416 189 HOH HOH . P 5 HOH B 17 417 61 HOH HOH . P 5 HOH B 18 418 159 HOH HOH . P 5 HOH B 19 419 56 HOH HOH . P 5 HOH B 20 420 47 HOH HOH . P 5 HOH B 21 421 45 HOH HOH . P 5 HOH B 22 422 99 HOH HOH . P 5 HOH B 23 423 2 HOH HOH . P 5 HOH B 24 424 65 HOH HOH . P 5 HOH B 25 425 57 HOH HOH . P 5 HOH B 26 426 163 HOH HOH . P 5 HOH B 27 427 158 HOH HOH . P 5 HOH B 28 428 40 HOH HOH . P 5 HOH B 29 429 188 HOH HOH . P 5 HOH B 30 430 41 HOH HOH . P 5 HOH B 31 431 62 HOH HOH . P 5 HOH B 32 432 82 HOH HOH . P 5 HOH B 33 433 105 HOH HOH . P 5 HOH B 34 434 168 HOH HOH . P 5 HOH B 35 435 107 HOH HOH . P 5 HOH B 36 436 23 HOH HOH . P 5 HOH B 37 437 175 HOH HOH . P 5 HOH B 38 438 31 HOH HOH . P 5 HOH B 39 439 29 HOH HOH . P 5 HOH B 40 440 139 HOH HOH . P 5 HOH B 41 441 180 HOH HOH . P 5 HOH B 42 442 11 HOH HOH . P 5 HOH B 43 443 43 HOH HOH . P 5 HOH B 44 444 39 HOH HOH . P 5 HOH B 45 445 70 HOH HOH . P 5 HOH B 46 446 50 HOH HOH . P 5 HOH B 47 447 75 HOH HOH . P 5 HOH B 48 448 96 HOH HOH . P 5 HOH B 49 449 97 HOH HOH . P 5 HOH B 50 450 5 HOH HOH . P 5 HOH B 51 451 98 HOH HOH . P 5 HOH B 52 452 19 HOH HOH . P 5 HOH B 53 453 22 HOH HOH . P 5 HOH B 54 454 176 HOH HOH . P 5 HOH B 55 455 32 HOH HOH . P 5 HOH B 56 456 157 HOH HOH . P 5 HOH B 57 457 72 HOH HOH . P 5 HOH B 58 458 108 HOH HOH . P 5 HOH B 59 459 35 HOH HOH . P 5 HOH B 60 460 67 HOH HOH . P 5 HOH B 61 461 64 HOH HOH . P 5 HOH B 62 462 194 HOH HOH . P 5 HOH B 63 463 193 HOH HOH . P 5 HOH B 64 464 92 HOH HOH . P 5 HOH B 65 465 14 HOH HOH . P 5 HOH B 66 466 87 HOH HOH . P 5 HOH B 67 467 16 HOH HOH . P 5 HOH B 68 468 135 HOH HOH . P 5 HOH B 69 469 136 HOH HOH . P 5 HOH B 70 470 123 HOH HOH . P 5 HOH B 71 471 30 HOH HOH . P 5 HOH B 72 472 130 HOH HOH . P 5 HOH B 73 473 68 HOH HOH . P 5 HOH B 74 474 101 HOH HOH . P 5 HOH B 75 475 73 HOH HOH . P 5 HOH B 76 476 42 HOH HOH . P 5 HOH B 77 477 161 HOH HOH . P 5 HOH B 78 478 3 HOH HOH . P 5 HOH B 79 479 148 HOH HOH . P 5 HOH B 80 480 95 HOH HOH . P 5 HOH B 81 481 173 HOH HOH . P 5 HOH B 82 482 156 HOH HOH . P 5 HOH B 83 483 66 HOH HOH . P 5 HOH B 84 484 190 HOH HOH . P 5 HOH B 85 485 140 HOH HOH . P 5 HOH B 86 486 141 HOH HOH . P 5 HOH B 87 487 149 HOH HOH . P 5 HOH B 88 488 80 HOH HOH . P 5 HOH B 89 489 137 HOH HOH . P 5 HOH B 90 490 184 HOH HOH . P 5 HOH B 91 491 138 HOH HOH . P 5 HOH B 92 492 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . C 2 -42.847 0.703 19.07 1 38.36 ? C ACT 301 A 1 HETATM 2 O O ACT . . . C 2 -43.623 1.15 18.241 1 29.69 ? O ACT 301 A 1 HETATM 3 O OXT ACT . . . C 2 -42.913 0.818 20.326 1 49.84 ? OXT ACT 301 A 1 HETATM 4 C CH3 ACT . . . C 2 -41.602 -0.048 18.486 1 30.85 ? CH3 ACT 301 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 4 #