data_6XQ8 # _model_server_result.job_id pTJvwS3aILOs6sBso6iK3A _model_server_result.datetime_utc '2024-11-26 08:03:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xq8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6XQ8 # _exptl.entry_id 6XQ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6XQ8 _cell.length_a 102.017 _cell.length_b 102.017 _cell.length_c 102.779 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XQ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall 'P 62' _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,P 1 1,3 B,J,K,L,M,N,O,Q 1 2,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_544 -y,x-y-1,z-1/3 -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 51.0085 -88.349314 -34.259667 3 'crystal symmetry operation' 4_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 51.0085 -88.349314 0 4 'crystal symmetry operation' 5_554 y,-x+y,z-1/3 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 -34.259667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 19 A CYS 38 1_555 A SG CYS 80 A CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? disulf ? disulf2 A SG CYS 125 A CYS 144 1_555 A SG CYS 189 A CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 B SG CYS 19 B CYS 38 1_555 B SG CYS 80 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? disulf ? disulf4 B SG CYS 125 B CYS 144 1_555 B SG CYS 189 B CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 6XQ8 _atom_sites.fract_transf_matrix[1][1] 0.009802 _atom_sites.fract_transf_matrix[1][2] 0.005659 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011319 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00973 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 301 1 ACT ACT . D 2 ACT A 1 302 3 ACT ACT . E 2 ACT A 1 303 5 ACT ACT . F 2 ACT A 1 304 6 ACT ACT . G 3 V6M A 1 305 1 V6M ABC . H 4 V6P A 1 306 1 V6P XYZ . I 4 V6P A 1 307 3 V6P XYZ . J 2 ACT B 1 301 2 ACT ACT . K 2 ACT B 1 302 4 ACT ACT . L 5 CL B 1 303 1 CL CL . M 5 CL B 1 304 2 CL CL . N 3 V6M B 1 305 2 V6M ABC . O 4 V6P B 1 306 2 V6P XYZ . P 6 HOH A 1 401 149 HOH HOH . P 6 HOH A 2 402 158 HOH HOH . P 6 HOH A 3 403 190 HOH HOH . P 6 HOH A 4 404 78 HOH HOH . P 6 HOH A 5 405 31 HOH HOH . P 6 HOH A 6 406 17 HOH HOH . P 6 HOH A 7 407 182 HOH HOH . P 6 HOH A 8 408 168 HOH HOH . P 6 HOH A 9 409 90 HOH HOH . P 6 HOH A 10 410 52 HOH HOH . P 6 HOH A 11 411 33 HOH HOH . P 6 HOH A 12 412 45 HOH HOH . P 6 HOH A 13 413 24 HOH HOH . P 6 HOH A 14 414 36 HOH HOH . P 6 HOH A 15 415 79 HOH HOH . P 6 HOH A 16 416 43 HOH HOH . P 6 HOH A 17 417 178 HOH HOH . P 6 HOH A 18 418 38 HOH HOH . P 6 HOH A 19 419 141 HOH HOH . P 6 HOH A 20 420 59 HOH HOH . P 6 HOH A 21 421 119 HOH HOH . P 6 HOH A 22 422 102 HOH HOH . P 6 HOH A 23 423 163 HOH HOH . P 6 HOH A 24 424 77 HOH HOH . P 6 HOH A 25 425 42 HOH HOH . P 6 HOH A 26 426 128 HOH HOH . P 6 HOH A 27 427 117 HOH HOH . P 6 HOH A 28 428 146 HOH HOH . P 6 HOH A 29 429 155 HOH HOH . P 6 HOH A 30 430 110 HOH HOH . P 6 HOH A 31 431 180 HOH HOH . P 6 HOH A 32 432 54 HOH HOH . P 6 HOH A 33 433 61 HOH HOH . P 6 HOH A 34 434 83 HOH HOH . P 6 HOH A 35 435 26 HOH HOH . P 6 HOH A 36 436 5 HOH HOH . P 6 HOH A 37 437 10 HOH HOH . P 6 HOH A 38 438 19 HOH HOH . P 6 HOH A 39 439 21 HOH HOH . P 6 HOH A 40 440 157 HOH HOH . P 6 HOH A 41 441 6 HOH HOH . P 6 HOH A 42 442 12 HOH HOH . P 6 HOH A 43 443 162 HOH HOH . P 6 HOH A 44 444 35 HOH HOH . P 6 HOH A 45 445 114 HOH HOH . P 6 HOH A 46 446 109 HOH HOH . P 6 HOH A 47 447 67 HOH HOH . P 6 HOH A 48 448 75 HOH HOH . P 6 HOH A 49 449 106 HOH HOH . P 6 HOH A 50 450 9 HOH HOH . P 6 HOH A 51 451 91 HOH HOH . P 6 HOH A 52 452 94 HOH HOH . P 6 HOH A 53 453 11 HOH HOH . P 6 HOH A 54 454 69 HOH HOH . P 6 HOH A 55 455 104 HOH HOH . P 6 HOH A 56 456 46 HOH HOH . P 6 HOH A 57 457 82 HOH HOH . P 6 HOH A 58 458 64 HOH HOH . P 6 HOH A 59 459 101 HOH HOH . P 6 HOH A 60 460 18 HOH HOH . P 6 HOH A 61 461 137 HOH HOH . P 6 HOH A 62 462 57 HOH HOH . P 6 HOH A 63 463 179 HOH HOH . P 6 HOH A 64 464 115 HOH HOH . P 6 HOH A 65 465 50 HOH HOH . P 6 HOH A 66 466 164 HOH HOH . P 6 HOH A 67 467 123 HOH HOH . P 6 HOH A 68 468 127 HOH HOH . P 6 HOH A 69 469 143 HOH HOH . P 6 HOH A 70 470 132 HOH HOH . P 6 HOH A 71 471 93 HOH HOH . P 6 HOH A 72 472 99 HOH HOH . P 6 HOH A 73 473 136 HOH HOH . P 6 HOH A 74 474 170 HOH HOH . P 6 HOH A 75 475 92 HOH HOH . P 6 HOH A 76 476 139 HOH HOH . P 6 HOH A 77 477 86 HOH HOH . P 6 HOH A 78 478 169 HOH HOH . P 6 HOH A 79 479 120 HOH HOH . P 6 HOH A 80 480 89 HOH HOH . P 6 HOH A 81 481 122 HOH HOH . P 6 HOH A 82 482 41 HOH HOH . P 6 HOH A 83 483 48 HOH HOH . P 6 HOH A 84 484 95 HOH HOH . Q 6 HOH B 1 401 183 HOH HOH . Q 6 HOH B 2 402 167 HOH HOH . Q 6 HOH B 3 403 187 HOH HOH . Q 6 HOH B 4 404 66 HOH HOH . Q 6 HOH B 5 405 191 HOH HOH . Q 6 HOH B 6 406 124 HOH HOH . Q 6 HOH B 7 407 154 HOH HOH . Q 6 HOH B 8 408 29 HOH HOH . Q 6 HOH B 9 409 37 HOH HOH . Q 6 HOH B 10 410 39 HOH HOH . Q 6 HOH B 11 411 34 HOH HOH . Q 6 HOH B 12 412 166 HOH HOH . Q 6 HOH B 13 413 192 HOH HOH . Q 6 HOH B 14 414 22 HOH HOH . Q 6 HOH B 15 415 25 HOH HOH . Q 6 HOH B 16 416 156 HOH HOH . Q 6 HOH B 17 417 160 HOH HOH . Q 6 HOH B 18 418 84 HOH HOH . Q 6 HOH B 19 419 65 HOH HOH . Q 6 HOH B 20 420 116 HOH HOH . Q 6 HOH B 21 421 53 HOH HOH . Q 6 HOH B 22 422 118 HOH HOH . Q 6 HOH B 23 423 159 HOH HOH . Q 6 HOH B 24 424 81 HOH HOH . Q 6 HOH B 25 425 28 HOH HOH . Q 6 HOH B 26 426 49 HOH HOH . Q 6 HOH B 27 427 40 HOH HOH . Q 6 HOH B 28 428 56 HOH HOH . Q 6 HOH B 29 429 138 HOH HOH . Q 6 HOH B 30 430 13 HOH HOH . Q 6 HOH B 31 431 181 HOH HOH . Q 6 HOH B 32 432 14 HOH HOH . Q 6 HOH B 33 433 23 HOH HOH . Q 6 HOH B 34 434 130 HOH HOH . Q 6 HOH B 35 435 144 HOH HOH . Q 6 HOH B 36 436 126 HOH HOH . Q 6 HOH B 37 437 68 HOH HOH . Q 6 HOH B 38 438 80 HOH HOH . Q 6 HOH B 39 439 186 HOH HOH . Q 6 HOH B 40 440 3 HOH HOH . Q 6 HOH B 41 441 55 HOH HOH . Q 6 HOH B 42 442 97 HOH HOH . Q 6 HOH B 43 443 100 HOH HOH . Q 6 HOH B 44 444 176 HOH HOH . Q 6 HOH B 45 445 16 HOH HOH . Q 6 HOH B 46 446 4 HOH HOH . Q 6 HOH B 47 447 51 HOH HOH . Q 6 HOH B 48 448 7 HOH HOH . Q 6 HOH B 49 449 32 HOH HOH . Q 6 HOH B 50 450 108 HOH HOH . Q 6 HOH B 51 451 15 HOH HOH . Q 6 HOH B 52 452 70 HOH HOH . Q 6 HOH B 53 453 189 HOH HOH . Q 6 HOH B 54 454 145 HOH HOH . Q 6 HOH B 55 455 98 HOH HOH . Q 6 HOH B 56 456 71 HOH HOH . Q 6 HOH B 57 457 63 HOH HOH . Q 6 HOH B 58 458 8 HOH HOH . Q 6 HOH B 59 459 105 HOH HOH . Q 6 HOH B 60 460 125 HOH HOH . Q 6 HOH B 61 461 72 HOH HOH . Q 6 HOH B 62 462 47 HOH HOH . Q 6 HOH B 63 463 177 HOH HOH . Q 6 HOH B 64 464 73 HOH HOH . Q 6 HOH B 65 465 113 HOH HOH . Q 6 HOH B 66 466 131 HOH HOH . Q 6 HOH B 67 467 44 HOH HOH . Q 6 HOH B 68 468 165 HOH HOH . Q 6 HOH B 69 469 88 HOH HOH . Q 6 HOH B 70 470 20 HOH HOH . Q 6 HOH B 71 471 62 HOH HOH . Q 6 HOH B 72 472 121 HOH HOH . Q 6 HOH B 73 473 175 HOH HOH . Q 6 HOH B 74 474 184 HOH HOH . Q 6 HOH B 75 475 129 HOH HOH . Q 6 HOH B 76 476 74 HOH HOH . Q 6 HOH B 77 477 112 HOH HOH . Q 6 HOH B 78 478 107 HOH HOH . Q 6 HOH B 79 479 142 HOH HOH . Q 6 HOH B 80 480 188 HOH HOH . Q 6 HOH B 81 481 161 HOH HOH . Q 6 HOH B 82 482 60 HOH HOH . Q 6 HOH B 83 483 76 HOH HOH . Q 6 HOH B 84 484 140 HOH HOH . Q 6 HOH B 85 485 103 HOH HOH . Q 6 HOH B 86 486 147 HOH HOH . Q 6 HOH B 87 487 185 HOH HOH . Q 6 HOH B 88 488 96 HOH HOH . Q 6 HOH B 89 489 171 HOH HOH . Q 6 HOH B 90 490 174 HOH HOH . Q 6 HOH B 91 491 173 HOH HOH . Q 6 HOH B 92 492 172 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 2 20.747 -42.447 -10.456 1 36.35 ? C ACT 302 A 1 HETATM 2 O O ACT . . . D 2 20.497 -41.745 -11.485 1 36.44 ? O ACT 302 A 1 HETATM 3 O OXT ACT . . . D 2 21.872 -42.817 -10.025 1 35.9 ? OXT ACT 302 A 1 HETATM 4 C CH3 ACT . . . D 2 19.51 -42.922 -9.564 1 41.5 ? CH3 ACT 302 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #