data_6XQG # _model_server_result.job_id hQCUYItg6kjg-7bi5wbA3w _model_server_result.datetime_utc '2024-11-14 07:51:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xqg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6XQG # _exptl.entry_id 6XQG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XQG _cell.length_a 38.73 _cell.length_b 48.97 _cell.length_c 114.27 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XQG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 BGC GLC C1 O1 . O3 HO3 . sing 2 ? 2 3 2 BGC BGC C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B GLC 1 B 1 GLC A 403 GLC 2 n B BGC 2 B 2 BGC A 402 GLC 2 n B BGC 3 B 3 BGC A 401 GLC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 123 A CYS 120 1_555 A SG CYS 188 A CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? covale ? covale1 B O3 GLC . B GLC 1 1_555 B C1 BGC . B BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 B O4 BGC . B BGC 2 1_555 B C1 BGC . B BGC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? metalc ? metalc1 A O GLU 31 A GLU 28 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc2 A O GLY 75 A GLY 72 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc3 A O ASP 261 A ASP 258 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc4 A OD1 ASP 261 A ASP 258 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc5 C CA CA . A CA 301 1_555 D O HOH . A HOH 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc6 C CA CA . A CA 301 1_555 D O HOH . A HOH 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc7 C CA CA . A CA 301 1_555 D O HOH . A HOH 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6XQG _atom_sites.fract_transf_matrix[1][1] 0.02582 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020421 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008751 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 301 301 CA CA . D 4 HOH A 1 401 645 HOH HOH . D 4 HOH A 2 402 548 HOH HOH . D 4 HOH A 3 403 514 HOH HOH . D 4 HOH A 4 404 522 HOH HOH . D 4 HOH A 5 405 592 HOH HOH . D 4 HOH A 6 406 507 HOH HOH . D 4 HOH A 7 407 583 HOH HOH . D 4 HOH A 8 408 590 HOH HOH . D 4 HOH A 9 409 529 HOH HOH . D 4 HOH A 10 410 637 HOH HOH . D 4 HOH A 11 411 601 HOH HOH . D 4 HOH A 12 412 587 HOH HOH . D 4 HOH A 13 413 509 HOH HOH . D 4 HOH A 14 414 550 HOH HOH . D 4 HOH A 15 415 505 HOH HOH . D 4 HOH A 16 416 591 HOH HOH . D 4 HOH A 17 417 525 HOH HOH . D 4 HOH A 18 418 506 HOH HOH . D 4 HOH A 19 419 516 HOH HOH . D 4 HOH A 20 420 597 HOH HOH . D 4 HOH A 21 421 528 HOH HOH . D 4 HOH A 22 422 624 HOH HOH . D 4 HOH A 23 423 607 HOH HOH . D 4 HOH A 24 424 532 HOH HOH . D 4 HOH A 25 425 623 HOH HOH . D 4 HOH A 26 426 508 HOH HOH . D 4 HOH A 27 427 632 HOH HOH . D 4 HOH A 28 428 593 HOH HOH . D 4 HOH A 29 429 526 HOH HOH . D 4 HOH A 30 430 511 HOH HOH . D 4 HOH A 31 431 553 HOH HOH . D 4 HOH A 32 432 546 HOH HOH . D 4 HOH A 33 433 576 HOH HOH . D 4 HOH A 34 434 565 HOH HOH . D 4 HOH A 35 435 541 HOH HOH . D 4 HOH A 36 436 621 HOH HOH . D 4 HOH A 37 437 650 HOH HOH . D 4 HOH A 38 438 520 HOH HOH . D 4 HOH A 39 439 547 HOH HOH . D 4 HOH A 40 440 555 HOH HOH . D 4 HOH A 41 441 515 HOH HOH . D 4 HOH A 42 442 521 HOH HOH . D 4 HOH A 43 443 612 HOH HOH . D 4 HOH A 44 444 617 HOH HOH . D 4 HOH A 45 445 611 HOH HOH . D 4 HOH A 46 446 527 HOH HOH . D 4 HOH A 47 447 537 HOH HOH . D 4 HOH A 48 448 543 HOH HOH . D 4 HOH A 49 449 544 HOH HOH . D 4 HOH A 50 450 502 HOH HOH . D 4 HOH A 51 451 524 HOH HOH . D 4 HOH A 52 452 501 HOH HOH . D 4 HOH A 53 453 616 HOH HOH . D 4 HOH A 54 454 586 HOH HOH . D 4 HOH A 55 455 589 HOH HOH . D 4 HOH A 56 456 627 HOH HOH . D 4 HOH A 57 457 533 HOH HOH . D 4 HOH A 58 458 569 HOH HOH . D 4 HOH A 59 459 561 HOH HOH . D 4 HOH A 60 460 643 HOH HOH . D 4 HOH A 61 461 558 HOH HOH . D 4 HOH A 62 462 510 HOH HOH . D 4 HOH A 63 463 573 HOH HOH . D 4 HOH A 64 464 588 HOH HOH . D 4 HOH A 65 465 600 HOH HOH . D 4 HOH A 66 466 531 HOH HOH . D 4 HOH A 67 467 567 HOH HOH . D 4 HOH A 68 468 545 HOH HOH . D 4 HOH A 69 469 513 HOH HOH . D 4 HOH A 70 470 605 HOH HOH . D 4 HOH A 71 471 556 HOH HOH . D 4 HOH A 72 472 504 HOH HOH . D 4 HOH A 73 473 630 HOH HOH . D 4 HOH A 74 474 539 HOH HOH . D 4 HOH A 75 475 518 HOH HOH . D 4 HOH A 76 476 615 HOH HOH . D 4 HOH A 77 477 517 HOH HOH . D 4 HOH A 78 478 552 HOH HOH . D 4 HOH A 79 479 519 HOH HOH . D 4 HOH A 80 480 603 HOH HOH . D 4 HOH A 81 481 574 HOH HOH . D 4 HOH A 82 482 512 HOH HOH . D 4 HOH A 83 483 549 HOH HOH . D 4 HOH A 84 484 598 HOH HOH . D 4 HOH A 85 485 647 HOH HOH . D 4 HOH A 86 486 530 HOH HOH . D 4 HOH A 87 487 622 HOH HOH . D 4 HOH A 88 488 652 HOH HOH . D 4 HOH A 89 489 629 HOH HOH . D 4 HOH A 90 490 613 HOH HOH . D 4 HOH A 91 491 551 HOH HOH . D 4 HOH A 92 492 559 HOH HOH . D 4 HOH A 93 493 562 HOH HOH . D 4 HOH A 94 494 535 HOH HOH . D 4 HOH A 95 495 560 HOH HOH . D 4 HOH A 96 496 564 HOH HOH . D 4 HOH A 97 497 606 HOH HOH . D 4 HOH A 98 498 585 HOH HOH . D 4 HOH A 99 499 580 HOH HOH . D 4 HOH A 100 500 639 HOH HOH . D 4 HOH A 101 501 635 HOH HOH . D 4 HOH A 102 502 578 HOH HOH . D 4 HOH A 103 503 568 HOH HOH . D 4 HOH A 104 504 534 HOH HOH . D 4 HOH A 105 505 566 HOH HOH . D 4 HOH A 106 506 582 HOH HOH . D 4 HOH A 107 507 602 HOH HOH . D 4 HOH A 108 508 538 HOH HOH . D 4 HOH A 109 509 636 HOH HOH . D 4 HOH A 110 510 536 HOH HOH . D 4 HOH A 111 511 642 HOH HOH . D 4 HOH A 112 512 631 HOH HOH . D 4 HOH A 113 513 540 HOH HOH . D 4 HOH A 114 514 563 HOH HOH . D 4 HOH A 115 515 633 HOH HOH . D 4 HOH A 116 516 653 HOH HOH . D 4 HOH A 117 517 554 HOH HOH . D 4 HOH A 118 518 557 HOH HOH . D 4 HOH A 119 519 599 HOH HOH . D 4 HOH A 120 520 595 HOH HOH . D 4 HOH A 121 521 644 HOH HOH . D 4 HOH A 122 522 581 HOH HOH . D 4 HOH A 123 523 620 HOH HOH . D 4 HOH A 124 524 503 HOH HOH . D 4 HOH A 125 525 625 HOH HOH . D 4 HOH A 126 526 523 HOH HOH . D 4 HOH A 127 527 575 HOH HOH . D 4 HOH A 128 528 656 HOH HOH . D 4 HOH A 129 529 641 HOH HOH . D 4 HOH A 130 530 571 HOH HOH . D 4 HOH A 131 531 572 HOH HOH . D 4 HOH A 132 532 654 HOH HOH . D 4 HOH A 133 533 646 HOH HOH . D 4 HOH A 134 534 577 HOH HOH . D 4 HOH A 135 535 648 HOH HOH . D 4 HOH A 136 536 610 HOH HOH . D 4 HOH A 137 537 542 HOH HOH . D 4 HOH A 138 538 649 HOH HOH . D 4 HOH A 139 539 638 HOH HOH . D 4 HOH A 140 540 628 HOH HOH . D 4 HOH A 141 541 626 HOH HOH . D 4 HOH A 142 542 584 HOH HOH . D 4 HOH A 143 543 619 HOH HOH . D 4 HOH A 144 544 596 HOH HOH . D 4 HOH A 145 545 614 HOH HOH . D 4 HOH A 146 546 608 HOH HOH . D 4 HOH A 147 547 570 HOH HOH . D 4 HOH A 148 548 579 HOH HOH . D 4 HOH A 149 549 655 HOH HOH . D 4 HOH A 150 550 604 HOH HOH . D 4 HOH A 151 551 634 HOH HOH . D 4 HOH A 152 552 618 HOH HOH . D 4 HOH A 153 553 594 HOH HOH . D 4 HOH A 154 554 651 HOH HOH . D 4 HOH A 155 555 640 HOH HOH . D 4 HOH A 156 556 609 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 33.015 _atom_site.Cartn_y 0.231 _atom_site.Cartn_z 5.114 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 26.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #