data_6XQX # _model_server_result.job_id hTT6yEV8iPsGK0wKRw8vSQ _model_server_result.datetime_utc '2024-11-05 00:24:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xqx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 6XQX # _exptl.entry_id 6XQX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.623 _cell.angle_gamma 90 _cell.entry_id 6XQX _cell.length_a 44.52 _cell.length_b 77.31 _cell.length_c 88.18 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XQX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1 B,E,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6XQX _atom_sites.fract_transf_matrix[1][1] 0.022462 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000636 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012935 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011345 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 601 3 EDO EDO . D 3 SO4 A 1 602 1 SO4 SO4 . E 2 EDO B 1 601 1 EDO EDO . F 2 EDO B 1 602 2 EDO EDO . G 2 EDO B 1 603 4 EDO EDO . H 2 EDO B 1 604 5 EDO EDO . I 4 HOH A 1 701 64 HOH HOH . I 4 HOH A 2 702 9 HOH HOH . I 4 HOH A 3 703 52 HOH HOH . I 4 HOH A 4 704 31 HOH HOH . I 4 HOH A 5 705 63 HOH HOH . I 4 HOH A 6 706 5 HOH HOH . I 4 HOH A 7 707 14 HOH HOH . I 4 HOH A 8 708 69 HOH HOH . I 4 HOH A 9 709 22 HOH HOH . I 4 HOH A 10 710 7 HOH HOH . I 4 HOH A 11 711 1 HOH HOH . I 4 HOH A 12 712 57 HOH HOH . I 4 HOH A 13 713 46 HOH HOH . I 4 HOH A 14 714 12 HOH HOH . I 4 HOH A 15 715 43 HOH HOH . I 4 HOH A 16 716 19 HOH HOH . I 4 HOH A 17 717 4 HOH HOH . I 4 HOH A 18 718 55 HOH HOH . I 4 HOH A 19 719 6 HOH HOH . I 4 HOH A 20 720 10 HOH HOH . I 4 HOH A 21 721 29 HOH HOH . I 4 HOH A 22 722 40 HOH HOH . I 4 HOH A 23 723 16 HOH HOH . I 4 HOH A 24 724 15 HOH HOH . I 4 HOH A 25 725 66 HOH HOH . I 4 HOH A 26 726 13 HOH HOH . I 4 HOH A 27 727 51 HOH HOH . I 4 HOH A 28 728 28 HOH HOH . I 4 HOH A 29 729 41 HOH HOH . I 4 HOH A 30 730 58 HOH HOH . I 4 HOH A 31 731 48 HOH HOH . I 4 HOH A 32 732 60 HOH HOH . I 4 HOH A 33 733 47 HOH HOH . I 4 HOH A 34 734 68 HOH HOH . I 4 HOH A 35 735 70 HOH HOH . J 4 HOH B 1 701 39 HOH HOH . J 4 HOH B 2 702 49 HOH HOH . J 4 HOH B 3 703 45 HOH HOH . J 4 HOH B 4 704 44 HOH HOH . J 4 HOH B 5 705 33 HOH HOH . J 4 HOH B 6 706 2 HOH HOH . J 4 HOH B 7 707 27 HOH HOH . J 4 HOH B 8 708 18 HOH HOH . J 4 HOH B 9 709 42 HOH HOH . J 4 HOH B 10 710 20 HOH HOH . J 4 HOH B 11 711 59 HOH HOH . J 4 HOH B 12 712 53 HOH HOH . J 4 HOH B 13 713 54 HOH HOH . J 4 HOH B 14 714 3 HOH HOH . J 4 HOH B 15 715 37 HOH HOH . J 4 HOH B 16 716 17 HOH HOH . J 4 HOH B 17 717 24 HOH HOH . J 4 HOH B 18 718 65 HOH HOH . J 4 HOH B 19 719 56 HOH HOH . J 4 HOH B 20 720 38 HOH HOH . J 4 HOH B 21 721 35 HOH HOH . J 4 HOH B 22 722 25 HOH HOH . J 4 HOH B 23 723 26 HOH HOH . J 4 HOH B 24 724 23 HOH HOH . J 4 HOH B 25 725 8 HOH HOH . J 4 HOH B 26 726 11 HOH HOH . J 4 HOH B 27 727 34 HOH HOH . J 4 HOH B 28 728 32 HOH HOH . J 4 HOH B 29 729 36 HOH HOH . J 4 HOH B 30 730 62 HOH HOH . J 4 HOH B 31 731 67 HOH HOH . J 4 HOH B 32 732 30 HOH HOH . J 4 HOH B 33 733 61 HOH HOH . J 4 HOH B 34 734 21 HOH HOH . J 4 HOH B 35 735 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 2 -23.079 -9.498 -28.048 1 61.27 ? C1 EDO 602 B 1 HETATM 2 O O1 EDO . . . F 2 -21.659 -9.475 -28.223 1 61.6 ? O1 EDO 602 B 1 HETATM 3 C C2 EDO . . . F 2 -23.696 -10.574 -28.929 1 62.09 ? C2 EDO 602 B 1 HETATM 4 O O2 EDO . . . F 2 -25.112 -10.374 -29 1 62.24 ? O2 EDO 602 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #