data_6XRP # _model_server_result.job_id 3yjvqnFYnrOlj8394ozyYw _model_server_result.datetime_utc '2024-10-11 00:28:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xrp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 6XRP # _exptl.entry_id 6XRP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 177.243 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(4-phenylbutyl)formamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6XRP _cell.length_a 109.46 _cell.length_b 109.46 _cell.length_c 129.471 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XRP _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id ALA _struct_conn.ptnr1_label_seq_id 6 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id ALA _struct_conn.ptnr1_auth_seq_id 501 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id CAC _struct_conn.ptnr2_label_comp_id V87 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id V87 _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.52 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C11 H15 N O' _chem_comp.formula_weight 177.243 _chem_comp.id V87 _chem_comp.mon_nstd_flag . _chem_comp.name N-(4-phenylbutyl)formamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAE CAC V87 doub 358 n n CAG CAH V87 sing 359 n n CAG CAF V87 sing 360 n n CAC NAD V87 sing 361 n n CAI CAH V87 sing 362 n n CAI CAJ V87 sing 363 n n NAD CAF V87 sing 364 n n CAO CAJ V87 doub 365 n y CAO CAN V87 sing 366 n y CAJ CAK V87 sing 367 n y CAN CAM V87 doub 368 n y CAK CAL V87 doub 369 n y CAM CAL V87 sing 370 n y CAC H1 V87 sing 371 n n NAD H2 V87 sing 372 n n CAF H3 V87 sing 373 n n CAF H4 V87 sing 374 n n CAG H5 V87 sing 375 n n CAG H6 V87 sing 376 n n CAH H7 V87 sing 377 n n CAH H8 V87 sing 378 n n CAI H9 V87 sing 379 n n CAI H10 V87 sing 380 n n CAK H11 V87 sing 381 n n CAL H12 V87 sing 382 n n CAM H13 V87 sing 383 n n CAN H14 V87 sing 384 n n CAO H15 V87 sing 385 n n # _atom_sites.entry_id 6XRP _atom_sites.fract_transf_matrix[1][1] 0.009136 _atom_sites.fract_transf_matrix[1][2] 0.005275 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010549 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007724 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 V87 B 1 601 502 V87 DRG . D 4 HOH A 1 301 522 HOH HOH . D 4 HOH A 2 302 514 HOH HOH . D 4 HOH A 3 303 509 HOH HOH . D 4 HOH A 4 304 512 HOH HOH . D 4 HOH A 5 305 513 HOH HOH . D 4 HOH A 6 306 507 HOH HOH . D 4 HOH A 7 307 521 HOH HOH . D 4 HOH A 8 308 520 HOH HOH . D 4 HOH A 9 309 505 HOH HOH . D 4 HOH A 10 310 518 HOH HOH . D 4 HOH A 11 311 519 HOH HOH . D 4 HOH A 12 312 503 HOH HOH . D 4 HOH A 13 313 504 HOH HOH . D 4 HOH A 14 314 516 HOH HOH . D 4 HOH A 15 315 508 HOH HOH . D 4 HOH A 16 316 510 HOH HOH . D 4 HOH A 17 317 511 HOH HOH . D 4 HOH A 18 318 517 HOH HOH . D 4 HOH A 19 319 515 HOH HOH . D 4 HOH A 20 320 501 HOH HOH . D 4 HOH A 21 321 502 HOH HOH . D 4 HOH A 22 322 506 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC V87 . . . C 3 -13.654 -6.78 -13.129 1 74.51 ? CAC V87 601 B 1 HETATM 2 N NAD V87 . . . C 3 -13.009 -7.995 -12.644 1 75.73 ? NAD V87 601 B 1 HETATM 3 O OAE V87 . . . C 3 -12.985 -5.806 -13.307 1 73.15 ? OAE V87 601 B 1 HETATM 4 C CAF V87 . . . C 3 -11.59 -8.116 -12.342 1 76.77 ? CAF V87 601 B 1 HETATM 5 C CAG V87 . . . C 3 -10.679 -7.364 -13.302 1 81.45 ? CAG V87 601 B 1 HETATM 6 C CAH V87 . . . C 3 -9.66 -6.577 -12.482 1 89.28 ? CAH V87 601 B 1 HETATM 7 C CAI V87 . . . C 3 -9.627 -5.094 -12.817 1 85.16 ? CAI V87 601 B 1 HETATM 8 C CAJ V87 . . . C 3 -8.517 -4.448 -12.002 1 90.41 ? CAJ V87 601 B 1 HETATM 9 C CAK V87 . . . C 3 -8.838 -3.649 -10.919 1 90.17 ? CAK V87 601 B 1 HETATM 10 C CAL V87 . . . C 3 -7.825 -3.072 -10.166 1 95.14 ? CAL V87 601 B 1 HETATM 11 C CAM V87 . . . C 3 -6.492 -3.272 -10.505 1 97.33 ? CAM V87 601 B 1 HETATM 12 C CAN V87 . . . C 3 -6.174 -4.071 -11.597 1 100.71 ? CAN V87 601 B 1 HETATM 13 C CAO V87 . . . C 3 -7.189 -4.662 -12.343 1 96.09 ? CAO V87 601 B 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #