data_6XS5
#
_model_server_result.job_id            fE1Y03fTVZwI9y901C6LvQ 
_model_server_result.datetime_utc      '2024-12-23 03:02:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xs5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    6XS5 
#
_exptl.entry_id    6XS5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.53 
_cell.angle_gamma         90 
_cell.entry_id            6XS5 
_cell.length_a            114.39 
_cell.length_b            43.77 
_cell.length_c            43.14 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XS5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C09 48V 1 B 48V 0 1_555 B N DTY 2 B DTY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? 
covale ? covale2 B N01 48V 1 B 48V 0 1_555 B C ARG 17 B ARG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? 
covale ? covale3 B C DTY 2 B DTY 1 1_555 B N ILE 3 B ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 177 n n 
C1 C2 GOL sing 178 n n 
C1 H11 GOL sing 179 n n 
C1 H12 GOL sing 180 n n 
O1 HO1 GOL sing 181 n n 
C2 O2 GOL sing 182 n n 
C2 C3 GOL sing 183 n n 
C2 H2 GOL sing 184 n n 
O2 HO2 GOL sing 185 n n 
C3 O3 GOL sing 186 n n 
C3 H31 GOL sing 187 n n 
C3 H32 GOL sing 188 n n 
O3 HO3 GOL sing 189 n n 
#
_atom_sites.entry_id                     6XS5 
_atom_sites.fract_transf_matrix[1][1]    0.008742 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001625 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022847 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023577 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 201 1 GOL GOL . 
D 3 GOL A 1 202 2 GOL GOL . 
E 4 FMT A 1 203 1 FMT FMT . 
F 5 HOH A 1 301 5 HOH HOH . 
F 5 HOH A 2 302 86 HOH HOH . 
F 5 HOH A 3 303 26 HOH HOH . 
F 5 HOH A 4 304 69 HOH HOH . 
F 5 HOH A 5 305 56 HOH HOH . 
F 5 HOH A 6 306 57 HOH HOH . 
F 5 HOH A 7 307 24 HOH HOH . 
F 5 HOH A 8 308 4 HOH HOH . 
F 5 HOH A 9 309 16 HOH HOH . 
F 5 HOH A 10 310 61 HOH HOH . 
F 5 HOH A 11 311 32 HOH HOH . 
F 5 HOH A 12 312 71 HOH HOH . 
F 5 HOH A 13 313 75 HOH HOH . 
F 5 HOH A 14 314 60 HOH HOH . 
F 5 HOH A 15 315 65 HOH HOH . 
F 5 HOH A 16 316 8 HOH HOH . 
F 5 HOH A 17 317 66 HOH HOH . 
F 5 HOH A 18 318 87 HOH HOH . 
F 5 HOH A 19 319 44 HOH HOH . 
F 5 HOH A 20 320 11 HOH HOH . 
F 5 HOH A 21 321 10 HOH HOH . 
F 5 HOH A 22 322 19 HOH HOH . 
F 5 HOH A 23 323 9 HOH HOH . 
F 5 HOH A 24 324 55 HOH HOH . 
F 5 HOH A 25 325 13 HOH HOH . 
F 5 HOH A 26 326 37 HOH HOH . 
F 5 HOH A 27 327 72 HOH HOH . 
F 5 HOH A 28 328 77 HOH HOH . 
F 5 HOH A 29 329 15 HOH HOH . 
F 5 HOH A 30 330 58 HOH HOH . 
F 5 HOH A 31 331 3 HOH HOH . 
F 5 HOH A 32 332 2 HOH HOH . 
F 5 HOH A 33 333 17 HOH HOH . 
F 5 HOH A 34 334 25 HOH HOH . 
F 5 HOH A 35 335 31 HOH HOH . 
F 5 HOH A 36 336 1 HOH HOH . 
F 5 HOH A 37 337 70 HOH HOH . 
F 5 HOH A 38 338 6 HOH HOH . 
F 5 HOH A 39 339 14 HOH HOH . 
F 5 HOH A 40 340 51 HOH HOH . 
F 5 HOH A 41 341 84 HOH HOH . 
F 5 HOH A 42 342 54 HOH HOH . 
F 5 HOH A 43 343 39 HOH HOH . 
F 5 HOH A 44 344 27 HOH HOH . 
F 5 HOH A 45 345 18 HOH HOH . 
F 5 HOH A 46 346 85 HOH HOH . 
F 5 HOH A 47 347 28 HOH HOH . 
F 5 HOH A 48 348 43 HOH HOH . 
F 5 HOH A 49 349 81 HOH HOH . 
F 5 HOH A 50 350 53 HOH HOH . 
F 5 HOH A 51 351 78 HOH HOH . 
F 5 HOH A 52 352 41 HOH HOH . 
F 5 HOH A 53 353 36 HOH HOH . 
F 5 HOH A 54 354 48 HOH HOH . 
F 5 HOH A 55 355 12 HOH HOH . 
F 5 HOH A 56 356 50 HOH HOH . 
F 5 HOH A 57 357 22 HOH HOH . 
F 5 HOH A 58 358 90 HOH HOH . 
F 5 HOH A 59 359 33 HOH HOH . 
F 5 HOH A 60 360 88 HOH HOH . 
F 5 HOH A 61 361 73 HOH HOH . 
F 5 HOH A 62 362 45 HOH HOH . 
F 5 HOH A 63 363 52 HOH HOH . 
F 5 HOH A 64 364 30 HOH HOH . 
F 5 HOH A 65 365 59 HOH HOH . 
F 5 HOH A 66 366 29 HOH HOH . 
F 5 HOH A 67 367 46 HOH HOH . 
F 5 HOH A 68 368 68 HOH HOH . 
F 5 HOH A 69 369 80 HOH HOH . 
F 5 HOH A 70 370 76 HOH HOH . 
F 5 HOH A 71 371 42 HOH HOH . 
F 5 HOH A 72 372 62 HOH HOH . 
F 5 HOH A 73 373 47 HOH HOH . 
F 5 HOH A 74 374 79 HOH HOH . 
F 5 HOH A 75 375 64 HOH HOH . 
F 5 HOH A 76 376 67 HOH HOH . 
F 5 HOH A 77 377 82 HOH HOH . 
F 5 HOH A 78 378 63 HOH HOH . 
F 5 HOH A 79 379 89 HOH HOH . 
F 5 HOH A 80 380 74 HOH HOH . 
G 5 HOH B 1 101 38 HOH HOH . 
G 5 HOH B 2 102 34 HOH HOH . 
G 5 HOH B 3 103 49 HOH HOH . 
G 5 HOH B 4 104 23 HOH HOH . 
G 5 HOH B 5 105 35 HOH HOH . 
G 5 HOH B 6 106 91 HOH HOH . 
G 5 HOH B 7 107 21 HOH HOH . 
G 5 HOH B 8 108 83 HOH HOH . 
G 5 HOH B 9 109 20 HOH HOH . 
G 5 HOH B 10 110 40 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 -32.414 -22.611 15.515 1 47.33 ? C1 GOL 201 A 1 
HETATM 2 O O1 GOL . . . C 3 -32.998 -22.156 14.31 1 37.57 ? O1 GOL 201 A 1 
HETATM 3 C C2 GOL . . . C 3 -32.74 -21.659 16.662 1 42.12 ? C2 GOL 201 A 1 
HETATM 4 O O2 GOL . . . C 3 -33.442 -22.371 17.657 1 58.61 ? O2 GOL 201 A 1 
HETATM 5 C C3 GOL . . . C 3 -31.457 -21.06 17.245 1 38.17 ? C3 GOL 201 A 1 
HETATM 6 O O3 GOL . . . C 3 -30.835 -21.979 18.12 1 40.2 ? O3 GOL 201 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           6 
#