data_6XS7
#
_model_server_result.job_id            51jsp3wS1CWJDQMnmqqNfA 
_model_server_result.datetime_utc      '2024-12-23 03:05:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xs7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    6XS7 
#
_exptl.entry_id    6XS7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6XS7 
_cell.length_a            38.06 
_cell.length_b            144.01 
_cell.length_c            43.02 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XS7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    'P 2 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C09 48V 1 B 48V 0 1_555 B N DTY 2 B DTY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale2 B N01 48V 1 B 48V 0 1_555 B C ARG 17 B ARG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? 
covale ? covale3 B C DTY 2 B DTY 1 1_555 B N THR 3 B THR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 177 n n 
C1 C2 GOL sing 178 n n 
C1 H11 GOL sing 179 n n 
C1 H12 GOL sing 180 n n 
O1 HO1 GOL sing 181 n n 
C2 O2 GOL sing 182 n n 
C2 C3 GOL sing 183 n n 
C2 H2 GOL sing 184 n n 
O2 HO2 GOL sing 185 n n 
C3 O3 GOL sing 186 n n 
C3 H31 GOL sing 187 n n 
C3 H32 GOL sing 188 n n 
O3 HO3 GOL sing 189 n n 
#
_atom_sites.entry_id                     6XS7 
_atom_sites.fract_transf_matrix[1][1]    0.026274 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006944 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023245 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 201 1 GOL GOL . 
D 3 GOL A 1 202 2 GOL GOL . 
E 4 FMT A 1 203 1 FMT FMT . 
F 5 HOH A 1 301 179 HOH HOH . 
F 5 HOH A 2 302 157 HOH HOH . 
F 5 HOH A 3 303 90 HOH HOH . 
F 5 HOH A 4 304 150 HOH HOH . 
F 5 HOH A 5 305 39 HOH HOH . 
F 5 HOH A 6 306 113 HOH HOH . 
F 5 HOH A 7 307 153 HOH HOH . 
F 5 HOH A 8 308 43 HOH HOH . 
F 5 HOH A 9 309 174 HOH HOH . 
F 5 HOH A 10 310 116 HOH HOH . 
F 5 HOH A 11 311 156 HOH HOH . 
F 5 HOH A 12 312 121 HOH HOH . 
F 5 HOH A 13 313 36 HOH HOH . 
F 5 HOH A 14 314 51 HOH HOH . 
F 5 HOH A 15 315 80 HOH HOH . 
F 5 HOH A 16 316 168 HOH HOH . 
F 5 HOH A 17 317 74 HOH HOH . 
F 5 HOH A 18 318 59 HOH HOH . 
F 5 HOH A 19 319 65 HOH HOH . 
F 5 HOH A 20 320 30 HOH HOH . 
F 5 HOH A 21 321 97 HOH HOH . 
F 5 HOH A 22 322 5 HOH HOH . 
F 5 HOH A 23 323 122 HOH HOH . 
F 5 HOH A 24 324 112 HOH HOH . 
F 5 HOH A 25 325 11 HOH HOH . 
F 5 HOH A 26 326 89 HOH HOH . 
F 5 HOH A 27 327 128 HOH HOH . 
F 5 HOH A 28 328 62 HOH HOH . 
F 5 HOH A 29 329 56 HOH HOH . 
F 5 HOH A 30 330 57 HOH HOH . 
F 5 HOH A 31 331 52 HOH HOH . 
F 5 HOH A 32 332 6 HOH HOH . 
F 5 HOH A 33 333 3 HOH HOH . 
F 5 HOH A 34 334 50 HOH HOH . 
F 5 HOH A 35 335 134 HOH HOH . 
F 5 HOH A 36 336 7 HOH HOH . 
F 5 HOH A 37 337 167 HOH HOH . 
F 5 HOH A 38 338 37 HOH HOH . 
F 5 HOH A 39 339 142 HOH HOH . 
F 5 HOH A 40 340 166 HOH HOH . 
F 5 HOH A 41 341 172 HOH HOH . 
F 5 HOH A 42 342 10 HOH HOH . 
F 5 HOH A 43 343 92 HOH HOH . 
F 5 HOH A 44 344 34 HOH HOH . 
F 5 HOH A 45 345 41 HOH HOH . 
F 5 HOH A 46 346 46 HOH HOH . 
F 5 HOH A 47 347 102 HOH HOH . 
F 5 HOH A 48 348 31 HOH HOH . 
F 5 HOH A 49 349 119 HOH HOH . 
F 5 HOH A 50 350 146 HOH HOH . 
F 5 HOH A 51 351 44 HOH HOH . 
F 5 HOH A 52 352 54 HOH HOH . 
F 5 HOH A 53 353 77 HOH HOH . 
F 5 HOH A 54 354 98 HOH HOH . 
F 5 HOH A 55 355 42 HOH HOH . 
F 5 HOH A 56 356 20 HOH HOH . 
F 5 HOH A 57 357 139 HOH HOH . 
F 5 HOH A 58 358 60 HOH HOH . 
F 5 HOH A 59 359 28 HOH HOH . 
F 5 HOH A 60 360 105 HOH HOH . 
F 5 HOH A 61 361 120 HOH HOH . 
F 5 HOH A 62 362 18 HOH HOH . 
F 5 HOH A 63 363 1 HOH HOH . 
F 5 HOH A 64 364 114 HOH HOH . 
F 5 HOH A 65 365 19 HOH HOH . 
F 5 HOH A 66 366 64 HOH HOH . 
F 5 HOH A 67 367 118 HOH HOH . 
F 5 HOH A 68 368 48 HOH HOH . 
F 5 HOH A 69 369 169 HOH HOH . 
F 5 HOH A 70 370 67 HOH HOH . 
F 5 HOH A 71 371 66 HOH HOH . 
F 5 HOH A 72 372 14 HOH HOH . 
F 5 HOH A 73 373 2 HOH HOH . 
F 5 HOH A 74 374 158 HOH HOH . 
F 5 HOH A 75 375 71 HOH HOH . 
F 5 HOH A 76 376 79 HOH HOH . 
F 5 HOH A 77 377 38 HOH HOH . 
F 5 HOH A 78 378 21 HOH HOH . 
F 5 HOH A 79 379 27 HOH HOH . 
F 5 HOH A 80 380 45 HOH HOH . 
F 5 HOH A 81 381 127 HOH HOH . 
F 5 HOH A 82 382 87 HOH HOH . 
F 5 HOH A 83 383 78 HOH HOH . 
F 5 HOH A 84 384 126 HOH HOH . 
F 5 HOH A 85 385 101 HOH HOH . 
F 5 HOH A 86 386 75 HOH HOH . 
F 5 HOH A 87 387 84 HOH HOH . 
F 5 HOH A 88 388 73 HOH HOH . 
F 5 HOH A 89 389 94 HOH HOH . 
F 5 HOH A 90 390 63 HOH HOH . 
F 5 HOH A 91 391 33 HOH HOH . 
F 5 HOH A 92 392 103 HOH HOH . 
F 5 HOH A 93 393 81 HOH HOH . 
F 5 HOH A 94 394 40 HOH HOH . 
F 5 HOH A 95 395 117 HOH HOH . 
F 5 HOH A 96 396 171 HOH HOH . 
F 5 HOH A 97 397 4 HOH HOH . 
F 5 HOH A 98 398 15 HOH HOH . 
F 5 HOH A 99 399 138 HOH HOH . 
F 5 HOH A 100 400 69 HOH HOH . 
F 5 HOH A 101 401 135 HOH HOH . 
F 5 HOH A 102 402 108 HOH HOH . 
F 5 HOH A 103 403 26 HOH HOH . 
F 5 HOH A 104 404 32 HOH HOH . 
F 5 HOH A 105 405 17 HOH HOH . 
F 5 HOH A 106 406 141 HOH HOH . 
F 5 HOH A 107 407 70 HOH HOH . 
F 5 HOH A 108 408 130 HOH HOH . 
F 5 HOH A 109 409 8 HOH HOH . 
F 5 HOH A 110 410 16 HOH HOH . 
F 5 HOH A 111 411 24 HOH HOH . 
F 5 HOH A 112 412 147 HOH HOH . 
F 5 HOH A 113 413 35 HOH HOH . 
F 5 HOH A 114 414 9 HOH HOH . 
F 5 HOH A 115 415 107 HOH HOH . 
F 5 HOH A 116 416 53 HOH HOH . 
F 5 HOH A 117 417 96 HOH HOH . 
F 5 HOH A 118 418 55 HOH HOH . 
F 5 HOH A 119 419 72 HOH HOH . 
F 5 HOH A 120 420 163 HOH HOH . 
F 5 HOH A 121 421 49 HOH HOH . 
F 5 HOH A 122 422 154 HOH HOH . 
F 5 HOH A 123 423 13 HOH HOH . 
F 5 HOH A 124 424 29 HOH HOH . 
F 5 HOH A 125 425 25 HOH HOH . 
F 5 HOH A 126 426 22 HOH HOH . 
F 5 HOH A 127 427 100 HOH HOH . 
F 5 HOH A 128 428 95 HOH HOH . 
F 5 HOH A 129 429 177 HOH HOH . 
F 5 HOH A 130 430 178 HOH HOH . 
F 5 HOH A 131 431 148 HOH HOH . 
F 5 HOH A 132 432 165 HOH HOH . 
F 5 HOH A 133 433 170 HOH HOH . 
F 5 HOH A 134 434 136 HOH HOH . 
F 5 HOH A 135 435 82 HOH HOH . 
F 5 HOH A 136 436 123 HOH HOH . 
F 5 HOH A 137 437 155 HOH HOH . 
F 5 HOH A 138 438 91 HOH HOH . 
F 5 HOH A 139 439 125 HOH HOH . 
F 5 HOH A 140 440 124 HOH HOH . 
F 5 HOH A 141 441 173 HOH HOH . 
F 5 HOH A 142 442 131 HOH HOH . 
F 5 HOH A 143 443 58 HOH HOH . 
F 5 HOH A 144 444 106 HOH HOH . 
F 5 HOH A 145 445 76 HOH HOH . 
F 5 HOH A 146 446 144 HOH HOH . 
F 5 HOH A 147 447 176 HOH HOH . 
F 5 HOH A 148 448 61 HOH HOH . 
F 5 HOH A 149 449 68 HOH HOH . 
F 5 HOH A 150 450 175 HOH HOH . 
F 5 HOH A 151 451 132 HOH HOH . 
F 5 HOH A 152 452 104 HOH HOH . 
F 5 HOH A 153 453 164 HOH HOH . 
F 5 HOH A 154 454 149 HOH HOH . 
F 5 HOH A 155 455 86 HOH HOH . 
F 5 HOH A 156 456 133 HOH HOH . 
F 5 HOH A 157 457 85 HOH HOH . 
F 5 HOH A 158 458 115 HOH HOH . 
F 5 HOH A 159 459 129 HOH HOH . 
F 5 HOH A 160 460 99 HOH HOH . 
F 5 HOH A 161 461 83 HOH HOH . 
F 5 HOH A 162 462 143 HOH HOH . 
F 5 HOH A 163 463 140 HOH HOH . 
F 5 HOH A 164 464 109 HOH HOH . 
G 5 HOH B 1 101 110 HOH HOH . 
G 5 HOH B 2 102 151 HOH HOH . 
G 5 HOH B 3 103 23 HOH HOH . 
G 5 HOH B 4 104 162 HOH HOH . 
G 5 HOH B 5 105 47 HOH HOH . 
G 5 HOH B 6 106 12 HOH HOH . 
G 5 HOH B 7 107 93 HOH HOH . 
G 5 HOH B 8 108 137 HOH HOH . 
G 5 HOH B 9 109 161 HOH HOH . 
G 5 HOH B 10 110 111 HOH HOH . 
G 5 HOH B 11 111 88 HOH HOH . 
G 5 HOH B 12 112 145 HOH HOH . 
G 5 HOH B 13 113 152 HOH HOH . 
G 5 HOH B 14 114 159 HOH HOH . 
G 5 HOH B 15 115 160 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 -11.553 39.396 -21.728 1 33.17 ? C1 GOL 202 A 1 
HETATM 2 O O1 GOL . . . D 3 -12.815 38.832 -21.416 1 21.77 ? O1 GOL 202 A 1 
HETATM 3 C C2 GOL . . . D 3 -10.721 38.486 -22.639 1 34.53 ? C2 GOL 202 A 1 
HETATM 4 O O2 GOL . . . D 3 -9.928 39.288 -23.488 1 43.56 ? O2 GOL 202 A 1 
HETATM 5 C C3 GOL . . . D 3 -9.786 37.586 -21.833 1 35.19 ? C3 GOL 202 A 1 
HETATM 6 O O3 GOL . . . D 3 -8.744 37.101 -22.663 1 25.98 ? O3 GOL 202 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#