data_6XTV
#
_model_server_result.job_id            cONCl5PaosINCuA4OzWUyQ 
_model_server_result.datetime_utc      '2025-08-31 00:57:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xtv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    6XTV 
#
_exptl.entry_id    6XTV 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              175.209 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ARGININE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6XTV 
_cell.length_a            123.95 
_cell.length_b            123.95 
_cell.length_c            111.35 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 6XTV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    'P 4abw 2nw' 
_symmetry.space_group_name_H-M     'P 41 21 2' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H15 N4 O2 1' 
_chem_comp.formula_weight    175.209 
_chem_comp.id                ARG 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              ARGININE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA ARG sing 13 n n 
N H ARG sing 14 n n 
N H2 ARG sing 15 n n 
CA C ARG sing 16 n n 
CA CB ARG sing 17 n n 
CA HA ARG sing 18 n n 
C O ARG doub 19 n n 
C OXT ARG sing 20 n n 
CB CG ARG sing 21 n n 
CB HB2 ARG sing 22 n n 
CB HB3 ARG sing 23 n n 
CG CD ARG sing 24 n n 
CG HG2 ARG sing 25 n n 
CG HG3 ARG sing 26 n n 
CD NE ARG sing 27 n n 
CD HD2 ARG sing 28 n n 
CD HD3 ARG sing 29 n n 
NE CZ ARG sing 30 n n 
NE HE ARG sing 31 n n 
CZ NH1 ARG sing 32 n n 
CZ NH2 ARG doub 33 n n 
NH1 HH11 ARG sing 34 n n 
NH1 HH12 ARG sing 35 n n 
NH2 HH21 ARG sing 36 n n 
NH2 HH22 ARG sing 37 n n 
OXT HXT ARG sing 38 n n 
#
_atom_sites.entry_id                     6XTV 
_atom_sites.fract_transf_matrix[1][1]    0.008068 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008068 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008981 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          C 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           ARG 
_pdbx_nonpoly_scheme.pdb_strand_id    B 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      501 
_pdbx_nonpoly_scheme.auth_seq_num     501 
_pdbx_nonpoly_scheme.pdb_mon_id       ARG 
_pdbx_nonpoly_scheme.auth_mon_id      ARG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N ARG . . . C 2 18.895 12.556 25.178 1 96.88 ? N ARG 501 B 1 
HETATM 2 C CA ARG . . . C 2 19.387 13.681 24.391 1 107.48 ? CA ARG 501 B 1 
HETATM 3 C C ARG . . . C 2 20.844 13.474 24.007 1 111.73 ? C ARG 501 B 1 
HETATM 4 O O ARG . . . C 2 21.254 13.747 22.879 1 120.12 ? O ARG 501 B 1 
HETATM 5 C CB ARG . . . C 2 19.245 14.99 25.168 1 107.29 ? CB ARG 501 B 1 
HETATM 6 C CG ARG . . . C 2 17.823 15.353 25.529 1 103.7 ? CG ARG 501 B 1 
HETATM 7 C CD ARG . . . C 2 17.76 15.886 26.942 1 98.83 ? CD ARG 501 B 1 
HETATM 8 N NE ARG . . . C 2 16.408 16.27 27.318 1 100.58 ? NE ARG 501 B 1 
HETATM 9 C CZ ARG . . . C 2 16.077 16.724 28.519 1 98.25 ? CZ ARG 501 B 1 
HETATM 10 N NH1 ARG . . . C 2 17.005 16.847 29.457 1 100.43 ? NH1 ARG 501 B 1 
HETATM 11 N NH2 ARG . . . C 2 14.822 17.059 28.781 1 100.42 ? NH2 ARG 501 B 1 
HETATM 12 O OXT ARG . . . C 2 21.646 13.038 24.829 1 106.4 ? OXT ARG 501 B 1 
HETATM 13 H HA ARG . . . C 2 18.859 13.751 23.581 1 129.03 ? HA ARG 501 B 1 
HETATM 14 H HB2 ARG . . . C 2 19.747 14.914 25.995 1 128.8 ? HB2 ARG 501 B 1 
HETATM 15 H HB3 ARG . . . C 2 19.603 15.711 24.627 1 128.8 ? HB3 ARG 501 B 1 
HETATM 16 H HG2 ARG . . . C 2 17.499 16.039 24.925 1 124.49 ? HG2 ARG 501 B 1 
HETATM 17 H HG3 ARG . . . C 2 17.261 14.565 25.47 1 124.49 ? HG3 ARG 501 B 1 
HETATM 18 H HD2 ARG . . . C 2 18.062 15.199 27.556 1 118.34 ? HD2 ARG 501 B 1 
HETATM 19 H HD3 ARG . . . C 2 18.328 16.669 27.013 1 118.34 ? HD3 ARG 501 B 1 
HETATM 20 H HE ARG . . . C 2 15.787 16.199 26.727 1 120.43 ? HE ARG 501 B 1 
HETATM 21 H HH11 ARG . . . C 2 17.821 16.633 29.285 1 120.57 ? HH11 ARG 501 B 1 
HETATM 22 H HH12 ARG . . . C 2 16.793 17.141 30.236 1 120.57 ? HH12 ARG 501 B 1 
HETATM 23 H HH21 ARG . . . C 2 14.221 16.982 28.171 1 120.24 ? HH21 ARG 501 B 1 
HETATM 24 H HH22 ARG . . . C 2 14.609 17.352 29.56 1 120.24 ? HH22 ARG 501 B 1 
#
_model_server_stats.io_time_ms              34 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           356 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           24 
#