data_6XU5 # _model_server_result.job_id GmZikWv2ROaEYSrxZql-OQ _model_server_result.datetime_utc '2024-11-26 12:02:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xu5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 6XU5 # _exptl.entry_id 6XU5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XU5 _cell.length_a 58.26 _cell.length_b 58.26 _cell.length_c 101.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XU5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 6XU5 _atom_sites.fract_transf_matrix[1][1] 0.017164 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009831 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 201 1 PLM PLM . C 3 CIT A 1 202 1 CIT CIT . D 3 CIT A 1 203 2 CIT CIT . E 4 HOH A 1 301 232 HOH HOH . E 4 HOH A 2 302 238 HOH HOH . E 4 HOH A 3 303 155 HOH HOH . E 4 HOH A 4 304 33 HOH HOH . E 4 HOH A 5 305 140 HOH HOH . E 4 HOH A 6 306 102 HOH HOH . E 4 HOH A 7 307 123 HOH HOH . E 4 HOH A 8 308 237 HOH HOH . E 4 HOH A 9 309 69 HOH HOH . E 4 HOH A 10 310 186 HOH HOH . E 4 HOH A 11 311 260 HOH HOH . E 4 HOH A 12 312 48 HOH HOH . E 4 HOH A 13 313 221 HOH HOH . E 4 HOH A 14 314 163 HOH HOH . E 4 HOH A 15 315 79 HOH HOH . E 4 HOH A 16 316 208 HOH HOH . E 4 HOH A 17 317 267 HOH HOH . E 4 HOH A 18 318 67 HOH HOH . E 4 HOH A 19 319 130 HOH HOH . E 4 HOH A 20 320 262 HOH HOH . E 4 HOH A 21 321 53 HOH HOH . E 4 HOH A 22 322 40 HOH HOH . E 4 HOH A 23 323 144 HOH HOH . E 4 HOH A 24 324 278 HOH HOH . E 4 HOH A 25 325 18 HOH HOH . E 4 HOH A 26 326 47 HOH HOH . E 4 HOH A 27 327 202 HOH HOH . E 4 HOH A 28 328 172 HOH HOH . E 4 HOH A 29 329 264 HOH HOH . E 4 HOH A 30 330 138 HOH HOH . E 4 HOH A 31 331 12 HOH HOH . E 4 HOH A 32 332 242 HOH HOH . E 4 HOH A 33 333 112 HOH HOH . E 4 HOH A 34 334 233 HOH HOH . E 4 HOH A 35 335 21 HOH HOH . E 4 HOH A 36 336 92 HOH HOH . E 4 HOH A 37 337 170 HOH HOH . E 4 HOH A 38 338 31 HOH HOH . E 4 HOH A 39 339 191 HOH HOH . E 4 HOH A 40 340 174 HOH HOH . E 4 HOH A 41 341 135 HOH HOH . E 4 HOH A 42 342 179 HOH HOH . E 4 HOH A 43 343 6 HOH HOH . E 4 HOH A 44 344 35 HOH HOH . E 4 HOH A 45 345 142 HOH HOH . E 4 HOH A 46 346 187 HOH HOH . E 4 HOH A 47 347 65 HOH HOH . E 4 HOH A 48 348 61 HOH HOH . E 4 HOH A 49 349 75 HOH HOH . E 4 HOH A 50 350 99 HOH HOH . E 4 HOH A 51 351 189 HOH HOH . E 4 HOH A 52 352 45 HOH HOH . E 4 HOH A 53 353 143 HOH HOH . E 4 HOH A 54 354 36 HOH HOH . E 4 HOH A 55 355 24 HOH HOH . E 4 HOH A 56 356 153 HOH HOH . E 4 HOH A 57 357 4 HOH HOH . E 4 HOH A 58 358 117 HOH HOH . E 4 HOH A 59 359 72 HOH HOH . E 4 HOH A 60 360 126 HOH HOH . E 4 HOH A 61 361 2 HOH HOH . E 4 HOH A 62 362 1 HOH HOH . E 4 HOH A 63 363 73 HOH HOH . E 4 HOH A 64 364 54 HOH HOH . E 4 HOH A 65 365 56 HOH HOH . E 4 HOH A 66 366 42 HOH HOH . E 4 HOH A 67 367 137 HOH HOH . E 4 HOH A 68 368 121 HOH HOH . E 4 HOH A 69 369 94 HOH HOH . E 4 HOH A 70 370 115 HOH HOH . E 4 HOH A 71 371 120 HOH HOH . E 4 HOH A 72 372 245 HOH HOH . E 4 HOH A 73 373 26 HOH HOH . E 4 HOH A 74 374 192 HOH HOH . E 4 HOH A 75 375 96 HOH HOH . E 4 HOH A 76 376 269 HOH HOH . E 4 HOH A 77 377 166 HOH HOH . E 4 HOH A 78 378 107 HOH HOH . E 4 HOH A 79 379 8 HOH HOH . E 4 HOH A 80 380 122 HOH HOH . E 4 HOH A 81 381 44 HOH HOH . E 4 HOH A 82 382 16 HOH HOH . E 4 HOH A 83 383 57 HOH HOH . E 4 HOH A 84 384 41 HOH HOH . E 4 HOH A 85 385 87 HOH HOH . E 4 HOH A 86 386 14 HOH HOH . E 4 HOH A 87 387 136 HOH HOH . E 4 HOH A 88 388 158 HOH HOH . E 4 HOH A 89 389 80 HOH HOH . E 4 HOH A 90 390 84 HOH HOH . E 4 HOH A 91 391 22 HOH HOH . E 4 HOH A 92 392 133 HOH HOH . E 4 HOH A 93 393 213 HOH HOH . E 4 HOH A 94 394 46 HOH HOH . E 4 HOH A 95 395 66 HOH HOH . E 4 HOH A 96 396 62 HOH HOH . E 4 HOH A 97 397 132 HOH HOH . E 4 HOH A 98 398 5 HOH HOH . E 4 HOH A 99 399 145 HOH HOH . E 4 HOH A 100 400 214 HOH HOH . E 4 HOH A 101 401 59 HOH HOH . E 4 HOH A 102 402 30 HOH HOH . E 4 HOH A 103 403 9 HOH HOH . E 4 HOH A 104 404 200 HOH HOH . E 4 HOH A 105 405 162 HOH HOH . E 4 HOH A 106 406 103 HOH HOH . E 4 HOH A 107 407 3 HOH HOH . E 4 HOH A 108 408 104 HOH HOH . E 4 HOH A 109 409 280 HOH HOH . E 4 HOH A 110 410 212 HOH HOH . E 4 HOH A 111 411 88 HOH HOH . E 4 HOH A 112 412 11 HOH HOH . E 4 HOH A 113 413 83 HOH HOH . E 4 HOH A 114 414 19 HOH HOH . E 4 HOH A 115 415 252 HOH HOH . E 4 HOH A 116 416 27 HOH HOH . E 4 HOH A 117 417 20 HOH HOH . E 4 HOH A 118 418 74 HOH HOH . E 4 HOH A 119 419 10 HOH HOH . E 4 HOH A 120 420 160 HOH HOH . E 4 HOH A 121 421 197 HOH HOH . E 4 HOH A 122 422 276 HOH HOH . E 4 HOH A 123 423 78 HOH HOH . E 4 HOH A 124 424 29 HOH HOH . E 4 HOH A 125 425 70 HOH HOH . E 4 HOH A 126 426 77 HOH HOH . E 4 HOH A 127 427 129 HOH HOH . E 4 HOH A 128 428 55 HOH HOH . E 4 HOH A 129 429 113 HOH HOH . E 4 HOH A 130 430 274 HOH HOH . E 4 HOH A 131 431 95 HOH HOH . E 4 HOH A 132 432 106 HOH HOH . E 4 HOH A 133 433 119 HOH HOH . E 4 HOH A 134 434 273 HOH HOH . E 4 HOH A 135 435 37 HOH HOH . E 4 HOH A 136 436 193 HOH HOH . E 4 HOH A 137 437 118 HOH HOH . E 4 HOH A 138 438 270 HOH HOH . E 4 HOH A 139 439 109 HOH HOH . E 4 HOH A 140 440 258 HOH HOH . E 4 HOH A 141 441 64 HOH HOH . E 4 HOH A 142 442 93 HOH HOH . E 4 HOH A 143 443 171 HOH HOH . E 4 HOH A 144 444 224 HOH HOH . E 4 HOH A 145 445 98 HOH HOH . E 4 HOH A 146 446 58 HOH HOH . E 4 HOH A 147 447 91 HOH HOH . E 4 HOH A 148 448 257 HOH HOH . E 4 HOH A 149 449 101 HOH HOH . E 4 HOH A 150 450 52 HOH HOH . E 4 HOH A 151 451 60 HOH HOH . E 4 HOH A 152 452 105 HOH HOH . E 4 HOH A 153 453 17 HOH HOH . E 4 HOH A 154 454 181 HOH HOH . E 4 HOH A 155 455 43 HOH HOH . E 4 HOH A 156 456 15 HOH HOH . E 4 HOH A 157 457 38 HOH HOH . E 4 HOH A 158 458 49 HOH HOH . E 4 HOH A 159 459 39 HOH HOH . E 4 HOH A 160 460 248 HOH HOH . E 4 HOH A 161 461 71 HOH HOH . E 4 HOH A 162 462 68 HOH HOH . E 4 HOH A 163 463 23 HOH HOH . E 4 HOH A 164 464 127 HOH HOH . E 4 HOH A 165 465 222 HOH HOH . E 4 HOH A 166 466 261 HOH HOH . E 4 HOH A 167 467 50 HOH HOH . E 4 HOH A 168 468 235 HOH HOH . E 4 HOH A 169 469 13 HOH HOH . E 4 HOH A 170 470 28 HOH HOH . E 4 HOH A 171 471 32 HOH HOH . E 4 HOH A 172 472 51 HOH HOH . E 4 HOH A 173 473 131 HOH HOH . E 4 HOH A 174 474 218 HOH HOH . E 4 HOH A 175 475 150 HOH HOH . E 4 HOH A 176 476 86 HOH HOH . E 4 HOH A 177 477 34 HOH HOH . E 4 HOH A 178 478 183 HOH HOH . E 4 HOH A 179 479 250 HOH HOH . E 4 HOH A 180 480 284 HOH HOH . E 4 HOH A 181 481 149 HOH HOH . E 4 HOH A 182 482 272 HOH HOH . E 4 HOH A 183 483 134 HOH HOH . E 4 HOH A 184 484 234 HOH HOH . E 4 HOH A 185 485 285 HOH HOH . E 4 HOH A 186 486 110 HOH HOH . E 4 HOH A 187 487 195 HOH HOH . E 4 HOH A 188 488 159 HOH HOH . E 4 HOH A 189 489 63 HOH HOH . E 4 HOH A 190 490 283 HOH HOH . E 4 HOH A 191 491 100 HOH HOH . E 4 HOH A 192 492 116 HOH HOH . E 4 HOH A 193 493 173 HOH HOH . E 4 HOH A 194 494 7 HOH HOH . E 4 HOH A 195 495 185 HOH HOH . E 4 HOH A 196 496 167 HOH HOH . E 4 HOH A 197 497 108 HOH HOH . E 4 HOH A 198 498 180 HOH HOH . E 4 HOH A 199 499 231 HOH HOH . E 4 HOH A 200 500 263 HOH HOH . E 4 HOH A 201 501 217 HOH HOH . E 4 HOH A 202 502 223 HOH HOH . E 4 HOH A 203 503 156 HOH HOH . E 4 HOH A 204 504 277 HOH HOH . E 4 HOH A 205 505 230 HOH HOH . E 4 HOH A 206 506 219 HOH HOH . E 4 HOH A 207 507 215 HOH HOH . E 4 HOH A 208 508 265 HOH HOH . E 4 HOH A 209 509 148 HOH HOH . E 4 HOH A 210 510 114 HOH HOH . E 4 HOH A 211 511 266 HOH HOH . E 4 HOH A 212 512 281 HOH HOH . E 4 HOH A 213 513 259 HOH HOH . E 4 HOH A 214 514 124 HOH HOH . E 4 HOH A 215 515 201 HOH HOH . E 4 HOH A 216 516 226 HOH HOH . E 4 HOH A 217 517 89 HOH HOH . E 4 HOH A 218 518 128 HOH HOH . E 4 HOH A 219 519 206 HOH HOH . E 4 HOH A 220 520 196 HOH HOH . E 4 HOH A 221 521 205 HOH HOH . E 4 HOH A 222 522 82 HOH HOH . E 4 HOH A 223 523 85 HOH HOH . E 4 HOH A 224 524 164 HOH HOH . E 4 HOH A 225 525 165 HOH HOH . E 4 HOH A 226 526 190 HOH HOH . E 4 HOH A 227 527 25 HOH HOH . E 4 HOH A 228 528 76 HOH HOH . E 4 HOH A 229 529 188 HOH HOH . E 4 HOH A 230 530 176 HOH HOH . E 4 HOH A 231 531 194 HOH HOH . E 4 HOH A 232 532 203 HOH HOH . E 4 HOH A 233 533 177 HOH HOH . E 4 HOH A 234 534 111 HOH HOH . E 4 HOH A 235 535 228 HOH HOH . E 4 HOH A 236 536 220 HOH HOH . E 4 HOH A 237 537 253 HOH HOH . E 4 HOH A 238 538 141 HOH HOH . E 4 HOH A 239 539 227 HOH HOH . E 4 HOH A 240 540 209 HOH HOH . E 4 HOH A 241 541 255 HOH HOH . E 4 HOH A 242 542 271 HOH HOH . E 4 HOH A 243 543 247 HOH HOH . E 4 HOH A 244 544 81 HOH HOH . E 4 HOH A 245 545 182 HOH HOH . E 4 HOH A 246 546 204 HOH HOH . E 4 HOH A 247 547 243 HOH HOH . E 4 HOH A 248 548 157 HOH HOH . E 4 HOH A 249 549 184 HOH HOH . E 4 HOH A 250 550 154 HOH HOH . E 4 HOH A 251 551 90 HOH HOH . E 4 HOH A 252 552 210 HOH HOH . E 4 HOH A 253 553 229 HOH HOH . E 4 HOH A 254 554 256 HOH HOH . E 4 HOH A 255 555 147 HOH HOH . E 4 HOH A 256 556 146 HOH HOH . E 4 HOH A 257 557 286 HOH HOH . E 4 HOH A 258 558 97 HOH HOH . E 4 HOH A 259 559 199 HOH HOH . E 4 HOH A 260 560 236 HOH HOH . E 4 HOH A 261 561 125 HOH HOH . E 4 HOH A 262 562 139 HOH HOH . E 4 HOH A 263 563 178 HOH HOH . E 4 HOH A 264 564 287 HOH HOH . E 4 HOH A 265 565 275 HOH HOH . E 4 HOH A 266 566 169 HOH HOH . E 4 HOH A 267 567 207 HOH HOH . E 4 HOH A 268 568 216 HOH HOH . E 4 HOH A 269 569 175 HOH HOH . E 4 HOH A 270 570 198 HOH HOH . E 4 HOH A 271 571 161 HOH HOH . E 4 HOH A 272 572 211 HOH HOH . E 4 HOH A 273 573 239 HOH HOH . E 4 HOH A 274 574 168 HOH HOH . E 4 HOH A 275 575 279 HOH HOH . E 4 HOH A 276 576 151 HOH HOH . E 4 HOH A 277 577 241 HOH HOH . E 4 HOH A 278 578 282 HOH HOH . E 4 HOH A 279 579 152 HOH HOH . E 4 HOH A 280 580 246 HOH HOH . E 4 HOH A 281 581 249 HOH HOH . E 4 HOH A 282 582 244 HOH HOH . E 4 HOH A 283 583 251 HOH HOH . E 4 HOH A 284 584 225 HOH HOH . E 4 HOH A 285 585 254 HOH HOH . E 4 HOH A 286 586 240 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . D 3 14.954 21.227 -5.995 1 33.97 ? C1 CIT 203 A 1 HETATM 2 O O1 CIT . . . D 3 14.983 20.102 -6.537 1 19.67 ? O1 CIT 203 A 1 HETATM 3 O O2 CIT . . . D 3 16.019 21.706 -5.565 1 33.61 ? O2 CIT 203 A 1 HETATM 4 C C2 CIT . . . D 3 13.653 21.981 -5.828 1 22.62 ? C2 CIT 203 A 1 HETATM 5 C C3 CIT . . . D 3 12.662 21.702 -6.964 1 26.36 ? C3 CIT 203 A 1 HETATM 6 O O7 CIT . . . D 3 12.468 20.263 -7.089 1 24.48 ? O7 CIT 203 A 1 HETATM 7 C C4 CIT . . . D 3 11.321 22.352 -6.655 1 14.82 ? C4 CIT 203 A 1 HETATM 8 C C5 CIT . . . D 3 10.56 21.977 -5.395 1 16.67 ? C5 CIT 203 A 1 HETATM 9 O O3 CIT . . . D 3 9.488 22.574 -5.193 1 6.88 ? O3 CIT 203 A 1 HETATM 10 O O4 CIT . . . D 3 10.904 21.095 -4.572 1 17.2 ? O4 CIT 203 A 1 HETATM 11 C C6 CIT . . . D 3 13.107 22.37 -8.293 1 23.49 ? C6 CIT 203 A 1 HETATM 12 O O5 CIT . . . D 3 12.767 21.983 -9.462 1 11.67 ? O5 CIT 203 A 1 HETATM 13 O O6 CIT . . . D 3 13.83 23.399 -8.238 1 17.12 ? O6 CIT 203 A 1 HETATM 14 H H21 CIT . . . D 3 13.861 23.05 -5.79 1 27.14 ? H21 CIT 203 A 1 HETATM 15 H H22 CIT . . . D 3 13.197 21.7 -4.879 1 27.14 ? H22 CIT 203 A 1 HETATM 16 H HO7 CIT . . . D 3 12.66 19.986 -8.01 1 29.37 ? HO7 CIT 203 A 1 HETATM 17 H H41 CIT . . . D 3 10.662 22.16 -7.502 1 17.79 ? H41 CIT 203 A 1 HETATM 18 H H42 CIT . . . D 3 11.479 23.43 -6.632 1 17.79 ? H42 CIT 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #