data_6XUA # _model_server_result.job_id J32IGfGenU-5sy1GUstlKw _model_server_result.datetime_utc '2024-11-23 03:31:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xua # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 6XUA # _exptl.entry_id 6XUA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XUA _cell.length_a 57.96 _cell.length_b 57.96 _cell.length_c 101.24 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XUA _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 6XUA _atom_sites.fract_transf_matrix[1][1] 0.017253 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017253 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009878 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM B 1 201 1 PLM PLM . C 3 CIT B 1 202 2 CIT CIT . D 3 CIT B 1 203 3 CIT CIT . E 4 HOH B 1 301 49 HOH HOH . E 4 HOH B 2 302 75 HOH HOH . E 4 HOH B 3 303 12 HOH HOH . E 4 HOH B 4 304 36 HOH HOH . E 4 HOH B 5 305 5 HOH HOH . E 4 HOH B 6 306 65 HOH HOH . E 4 HOH B 7 307 42 HOH HOH . E 4 HOH B 8 308 24 HOH HOH . E 4 HOH B 9 309 21 HOH HOH . E 4 HOH B 10 310 72 HOH HOH . E 4 HOH B 11 311 14 HOH HOH . E 4 HOH B 12 312 51 HOH HOH . E 4 HOH B 13 313 32 HOH HOH . E 4 HOH B 14 314 108 HOH HOH . E 4 HOH B 15 315 45 HOH HOH . E 4 HOH B 16 316 68 HOH HOH . E 4 HOH B 17 317 63 HOH HOH . E 4 HOH B 18 318 4 HOH HOH . E 4 HOH B 19 319 53 HOH HOH . E 4 HOH B 20 320 82 HOH HOH . E 4 HOH B 21 321 93 HOH HOH . E 4 HOH B 22 322 98 HOH HOH . E 4 HOH B 23 323 113 HOH HOH . E 4 HOH B 24 324 83 HOH HOH . E 4 HOH B 25 325 91 HOH HOH . E 4 HOH B 26 326 16 HOH HOH . E 4 HOH B 27 327 15 HOH HOH . E 4 HOH B 28 328 3 HOH HOH . E 4 HOH B 29 329 84 HOH HOH . E 4 HOH B 30 330 39 HOH HOH . E 4 HOH B 31 331 30 HOH HOH . E 4 HOH B 32 332 74 HOH HOH . E 4 HOH B 33 333 62 HOH HOH . E 4 HOH B 34 334 17 HOH HOH . E 4 HOH B 35 335 81 HOH HOH . E 4 HOH B 36 336 99 HOH HOH . E 4 HOH B 37 337 25 HOH HOH . E 4 HOH B 38 338 22 HOH HOH . E 4 HOH B 39 339 112 HOH HOH . E 4 HOH B 40 340 46 HOH HOH . E 4 HOH B 41 341 7 HOH HOH . E 4 HOH B 42 342 92 HOH HOH . E 4 HOH B 43 343 102 HOH HOH . E 4 HOH B 44 344 70 HOH HOH . E 4 HOH B 45 345 66 HOH HOH . E 4 HOH B 46 346 20 HOH HOH . E 4 HOH B 47 347 28 HOH HOH . E 4 HOH B 48 348 35 HOH HOH . E 4 HOH B 49 349 58 HOH HOH . E 4 HOH B 50 350 69 HOH HOH . E 4 HOH B 51 351 119 HOH HOH . E 4 HOH B 52 352 11 HOH HOH . E 4 HOH B 53 353 61 HOH HOH . E 4 HOH B 54 354 10 HOH HOH . E 4 HOH B 55 355 73 HOH HOH . E 4 HOH B 56 356 13 HOH HOH . E 4 HOH B 57 357 41 HOH HOH . E 4 HOH B 58 358 18 HOH HOH . E 4 HOH B 59 359 31 HOH HOH . E 4 HOH B 60 360 57 HOH HOH . E 4 HOH B 61 361 54 HOH HOH . E 4 HOH B 62 362 64 HOH HOH . E 4 HOH B 63 363 6 HOH HOH . E 4 HOH B 64 364 86 HOH HOH . E 4 HOH B 65 365 101 HOH HOH . E 4 HOH B 66 366 76 HOH HOH . E 4 HOH B 67 367 104 HOH HOH . E 4 HOH B 68 368 40 HOH HOH . E 4 HOH B 69 369 60 HOH HOH . E 4 HOH B 70 370 44 HOH HOH . E 4 HOH B 71 371 118 HOH HOH . E 4 HOH B 72 372 110 HOH HOH . E 4 HOH B 73 373 71 HOH HOH . E 4 HOH B 74 374 115 HOH HOH . E 4 HOH B 75 375 103 HOH HOH . E 4 HOH B 76 376 121 HOH HOH . E 4 HOH B 77 377 34 HOH HOH . E 4 HOH B 78 378 67 HOH HOH . E 4 HOH B 79 379 120 HOH HOH . E 4 HOH B 80 380 19 HOH HOH . E 4 HOH B 81 381 47 HOH HOH . E 4 HOH B 82 382 9 HOH HOH . E 4 HOH B 83 383 29 HOH HOH . E 4 HOH B 84 384 48 HOH HOH . E 4 HOH B 85 385 123 HOH HOH . E 4 HOH B 86 386 23 HOH HOH . E 4 HOH B 87 387 90 HOH HOH . E 4 HOH B 88 388 37 HOH HOH . E 4 HOH B 89 389 56 HOH HOH . E 4 HOH B 90 390 122 HOH HOH . E 4 HOH B 91 391 107 HOH HOH . E 4 HOH B 92 392 26 HOH HOH . E 4 HOH B 93 393 106 HOH HOH . E 4 HOH B 94 394 116 HOH HOH . E 4 HOH B 95 395 95 HOH HOH . E 4 HOH B 96 396 33 HOH HOH . E 4 HOH B 97 397 43 HOH HOH . E 4 HOH B 98 398 38 HOH HOH . E 4 HOH B 99 399 27 HOH HOH . E 4 HOH B 100 400 52 HOH HOH . E 4 HOH B 101 401 88 HOH HOH . E 4 HOH B 102 402 80 HOH HOH . E 4 HOH B 103 403 111 HOH HOH . E 4 HOH B 104 404 124 HOH HOH . E 4 HOH B 105 405 117 HOH HOH . E 4 HOH B 106 406 100 HOH HOH . E 4 HOH B 107 407 85 HOH HOH . E 4 HOH B 108 408 87 HOH HOH . E 4 HOH B 109 409 55 HOH HOH . E 4 HOH B 110 410 114 HOH HOH . E 4 HOH B 111 411 77 HOH HOH . E 4 HOH B 112 412 97 HOH HOH . E 4 HOH B 113 413 89 HOH HOH . E 4 HOH B 114 414 109 HOH HOH . E 4 HOH B 115 415 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . D 3 38.077 0.463 -8.058 1 38.91 ? C1 CIT 203 B 1 HETATM 2 O O1 CIT . . . D 3 39.066 0.329 -8.814 1 42.98 ? O1 CIT 203 B 1 HETATM 3 O O2 CIT . . . D 3 36.952 0.651 -8.571 1 33.2 ? O2 CIT 203 B 1 HETATM 4 C C2 CIT . . . D 3 38.247 0.391 -6.555 1 33.5 ? C2 CIT 203 B 1 HETATM 5 C C3 CIT . . . D 3 37.14 -0.463 -5.937 1 30.96 ? C3 CIT 203 B 1 HETATM 6 O O7 CIT . . . D 3 36.658 -1.325 -6.996 1 34.24 ? O7 CIT 203 B 1 HETATM 7 C C4 CIT . . . D 3 37.517 -1.384 -4.77 1 31.3 ? C4 CIT 203 B 1 HETATM 8 C C5 CIT . . . D 3 38.743 -0.96 -3.998 1 30.29 ? C5 CIT 203 B 1 HETATM 9 O O3 CIT . . . D 3 39.119 0.229 -4.002 1 44.57 ? O3 CIT 203 B 1 HETATM 10 O O4 CIT . . . D 3 39.399 -1.798 -3.339 1 36.94 ? O4 CIT 203 B 1 HETATM 11 C C6 CIT . . . D 3 35.969 0.411 -5.522 1 27.13 ? C6 CIT 203 B 1 HETATM 12 O O5 CIT . . . D 3 34.803 0.096 -5.844 1 28.31 ? O5 CIT 203 B 1 HETATM 13 O O6 CIT . . . D 3 36.16 1.461 -4.868 1 24.27 ? O6 CIT 203 B 1 HETATM 14 H H21 CIT . . . D 3 38.213 1.396 -6.133 1 40.2 ? H21 CIT 203 B 1 HETATM 15 H H22 CIT . . . D 3 39.219 -0.039 -6.316 1 40.2 ? H22 CIT 203 B 1 HETATM 16 H HO7 CIT . . . D 3 35.706 -1.15 -7.151 1 41.09 ? HO7 CIT 203 B 1 HETATM 17 H H41 CIT . . . D 3 36.674 -1.431 -4.08 1 37.56 ? H41 CIT 203 B 1 HETATM 18 H H42 CIT . . . D 3 37.686 -2.387 -5.161 1 37.56 ? H42 CIT 203 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 18 #