data_6XUQ # _model_server_result.job_id AtpOBZSSIn36ETJzRyjIRg _model_server_result.datetime_utc '2024-11-16 08:56:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xuq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 6XUQ # _exptl.entry_id 6XUQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XUQ _cell.length_a 53.09 _cell.length_b 93.85 _cell.length_c 235.66 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XUQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_454 -x-1,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 -53.09 0 -117.83 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 44 A CYS 51 1_555 A SG CYS 50 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 346 A CYS 353 1_555 A SG CYS 351 A CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf3 A SG CYS 358 A CYS 365 1_555 A SG CYS 380 A CYS 387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf4 A SG CYS 469 A CYS 476 1_555 A SG CYS 472 A CYS 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OD1 ASP 29 A ASP 36 1_555 B ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc2 A NE2 HIS 31 A HIS 38 1_555 B ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc3 A OD2 ASP 78 A ASP 85 1_555 B ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc4 A OD2 ASP 78 A ASP 85 1_555 C ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc5 A OD1 ASN 110 A ASN 117 1_555 C ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc6 A O ASN 206 A ASN 213 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc7 A NE2 HIS 213 A HIS 220 1_555 C ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc8 A OD1 ASP 230 A ASP 237 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc9 A OD2 ASP 230 A ASP 237 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc10 A ND1 HIS 236 A HIS 243 1_555 C ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc11 A O GLY 291 A GLY 298 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc12 B ZN ZN . A ZN 601 1_555 E O4 O1T . A O1T 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc13 B ZN ZN . A ZN 601 1_555 F O HOH . A HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc14 C ZN ZN . A ZN 602 1_555 E O3 O1T . A O1T 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc15 D CA CA . A CA 603 1_555 F O HOH . A HOH 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc16 D CA CA . A CA 603 1_555 F O HOH . A HOH 890 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6XUQ _atom_sites.fract_transf_matrix[1][1] 0.018836 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010655 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004243 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 601 601 ZN ZN . C 2 ZN A 1 602 602 ZN ZN . D 3 CA A 1 603 603 CA CA . E 4 O1T A 1 604 4000 O1T LIG . F 5 HOH A 1 701 162 HOH HOH . F 5 HOH A 2 702 2 HOH HOH . F 5 HOH A 3 703 66 HOH HOH . F 5 HOH A 4 704 121 HOH HOH . F 5 HOH A 5 705 31 HOH HOH . F 5 HOH A 6 706 126 HOH HOH . F 5 HOH A 7 707 5 HOH HOH . F 5 HOH A 8 708 94 HOH HOH . F 5 HOH A 9 709 77 HOH HOH . F 5 HOH A 10 710 16 HOH HOH . F 5 HOH A 11 711 60 HOH HOH . F 5 HOH A 12 712 24 HOH HOH . F 5 HOH A 13 713 58 HOH HOH . F 5 HOH A 14 714 11 HOH HOH . F 5 HOH A 15 715 69 HOH HOH . F 5 HOH A 16 716 142 HOH HOH . F 5 HOH A 17 717 44 HOH HOH . F 5 HOH A 18 718 85 HOH HOH . F 5 HOH A 19 719 54 HOH HOH . F 5 HOH A 20 720 140 HOH HOH . F 5 HOH A 21 721 193 HOH HOH . F 5 HOH A 22 722 18 HOH HOH . F 5 HOH A 23 723 28 HOH HOH . F 5 HOH A 24 724 163 HOH HOH . F 5 HOH A 25 725 151 HOH HOH . F 5 HOH A 26 726 22 HOH HOH . F 5 HOH A 27 727 21 HOH HOH . F 5 HOH A 28 728 122 HOH HOH . F 5 HOH A 29 729 9 HOH HOH . F 5 HOH A 30 730 39 HOH HOH . F 5 HOH A 31 731 111 HOH HOH . F 5 HOH A 32 732 103 HOH HOH . F 5 HOH A 33 733 180 HOH HOH . F 5 HOH A 34 734 52 HOH HOH . F 5 HOH A 35 735 105 HOH HOH . F 5 HOH A 36 736 164 HOH HOH . F 5 HOH A 37 737 71 HOH HOH . F 5 HOH A 38 738 218 HOH HOH . F 5 HOH A 39 739 45 HOH HOH . F 5 HOH A 40 740 25 HOH HOH . F 5 HOH A 41 741 59 HOH HOH . F 5 HOH A 42 742 23 HOH HOH . F 5 HOH A 43 743 174 HOH HOH . F 5 HOH A 44 744 34 HOH HOH . F 5 HOH A 45 745 33 HOH HOH . F 5 HOH A 46 746 190 HOH HOH . F 5 HOH A 47 747 27 HOH HOH . F 5 HOH A 48 748 7 HOH HOH . F 5 HOH A 49 749 89 HOH HOH . F 5 HOH A 50 750 15 HOH HOH . F 5 HOH A 51 751 216 HOH HOH . F 5 HOH A 52 752 107 HOH HOH . F 5 HOH A 53 753 47 HOH HOH . F 5 HOH A 54 754 138 HOH HOH . F 5 HOH A 55 755 131 HOH HOH . F 5 HOH A 56 756 161 HOH HOH . F 5 HOH A 57 757 4 HOH HOH . F 5 HOH A 58 758 132 HOH HOH . F 5 HOH A 59 759 141 HOH HOH . F 5 HOH A 60 760 117 HOH HOH . F 5 HOH A 61 761 139 HOH HOH . F 5 HOH A 62 762 217 HOH HOH . F 5 HOH A 63 763 167 HOH HOH . F 5 HOH A 64 764 1 HOH HOH . F 5 HOH A 65 765 74 HOH HOH . F 5 HOH A 66 766 90 HOH HOH . F 5 HOH A 67 767 197 HOH HOH . F 5 HOH A 68 768 92 HOH HOH . F 5 HOH A 69 769 43 HOH HOH . F 5 HOH A 70 770 63 HOH HOH . F 5 HOH A 71 771 42 HOH HOH . F 5 HOH A 72 772 200 HOH HOH . F 5 HOH A 73 773 70 HOH HOH . F 5 HOH A 74 774 123 HOH HOH . F 5 HOH A 75 775 35 HOH HOH . F 5 HOH A 76 776 160 HOH HOH . F 5 HOH A 77 777 196 HOH HOH . F 5 HOH A 78 778 48 HOH HOH . F 5 HOH A 79 779 136 HOH HOH . F 5 HOH A 80 780 36 HOH HOH . F 5 HOH A 81 781 152 HOH HOH . F 5 HOH A 82 782 211 HOH HOH . F 5 HOH A 83 783 202 HOH HOH . F 5 HOH A 84 784 184 HOH HOH . F 5 HOH A 85 785 79 HOH HOH . F 5 HOH A 86 786 148 HOH HOH . F 5 HOH A 87 787 10 HOH HOH . F 5 HOH A 88 788 96 HOH HOH . F 5 HOH A 89 789 179 HOH HOH . F 5 HOH A 90 790 120 HOH HOH . F 5 HOH A 91 791 118 HOH HOH . F 5 HOH A 92 792 170 HOH HOH . F 5 HOH A 93 793 14 HOH HOH . F 5 HOH A 94 794 129 HOH HOH . F 5 HOH A 95 795 81 HOH HOH . F 5 HOH A 96 796 124 HOH HOH . F 5 HOH A 97 797 37 HOH HOH . F 5 HOH A 98 798 73 HOH HOH . F 5 HOH A 99 799 12 HOH HOH . F 5 HOH A 100 800 49 HOH HOH . F 5 HOH A 101 801 127 HOH HOH . F 5 HOH A 102 802 29 HOH HOH . F 5 HOH A 103 803 195 HOH HOH . F 5 HOH A 104 804 113 HOH HOH . F 5 HOH A 105 805 88 HOH HOH . F 5 HOH A 106 806 91 HOH HOH . F 5 HOH A 107 807 214 HOH HOH . F 5 HOH A 108 808 61 HOH HOH . F 5 HOH A 109 809 102 HOH HOH . F 5 HOH A 110 810 3 HOH HOH . F 5 HOH A 111 811 30 HOH HOH . F 5 HOH A 112 812 51 HOH HOH . F 5 HOH A 113 813 173 HOH HOH . F 5 HOH A 114 814 210 HOH HOH . F 5 HOH A 115 815 176 HOH HOH . F 5 HOH A 116 816 41 HOH HOH . F 5 HOH A 117 817 125 HOH HOH . F 5 HOH A 118 818 149 HOH HOH . F 5 HOH A 119 819 137 HOH HOH . F 5 HOH A 120 820 32 HOH HOH . F 5 HOH A 121 821 187 HOH HOH . F 5 HOH A 122 822 6 HOH HOH . F 5 HOH A 123 823 171 HOH HOH . F 5 HOH A 124 824 68 HOH HOH . F 5 HOH A 125 825 175 HOH HOH . F 5 HOH A 126 826 53 HOH HOH . F 5 HOH A 127 827 106 HOH HOH . F 5 HOH A 128 828 57 HOH HOH . F 5 HOH A 129 829 67 HOH HOH . F 5 HOH A 130 830 87 HOH HOH . F 5 HOH A 131 831 75 HOH HOH . F 5 HOH A 132 832 40 HOH HOH . F 5 HOH A 133 833 83 HOH HOH . F 5 HOH A 134 834 185 HOH HOH . F 5 HOH A 135 835 208 HOH HOH . F 5 HOH A 136 836 104 HOH HOH . F 5 HOH A 137 837 198 HOH HOH . F 5 HOH A 138 838 116 HOH HOH . F 5 HOH A 139 839 72 HOH HOH . F 5 HOH A 140 840 212 HOH HOH . F 5 HOH A 141 841 99 HOH HOH . F 5 HOH A 142 842 188 HOH HOH . F 5 HOH A 143 843 207 HOH HOH . F 5 HOH A 144 844 46 HOH HOH . F 5 HOH A 145 845 146 HOH HOH . F 5 HOH A 146 846 147 HOH HOH . F 5 HOH A 147 847 186 HOH HOH . F 5 HOH A 148 848 205 HOH HOH . F 5 HOH A 149 849 80 HOH HOH . F 5 HOH A 150 850 100 HOH HOH . F 5 HOH A 151 851 112 HOH HOH . F 5 HOH A 152 852 86 HOH HOH . F 5 HOH A 153 853 213 HOH HOH . F 5 HOH A 154 854 115 HOH HOH . F 5 HOH A 155 855 153 HOH HOH . F 5 HOH A 156 856 17 HOH HOH . F 5 HOH A 157 857 98 HOH HOH . F 5 HOH A 158 858 109 HOH HOH . F 5 HOH A 159 859 183 HOH HOH . F 5 HOH A 160 860 8 HOH HOH . F 5 HOH A 161 861 157 HOH HOH . F 5 HOH A 162 862 101 HOH HOH . F 5 HOH A 163 863 168 HOH HOH . F 5 HOH A 164 864 154 HOH HOH . F 5 HOH A 165 865 182 HOH HOH . F 5 HOH A 166 866 93 HOH HOH . F 5 HOH A 167 867 155 HOH HOH . F 5 HOH A 168 868 119 HOH HOH . F 5 HOH A 169 869 19 HOH HOH . F 5 HOH A 170 870 13 HOH HOH . F 5 HOH A 171 871 145 HOH HOH . F 5 HOH A 172 872 135 HOH HOH . F 5 HOH A 173 873 143 HOH HOH . F 5 HOH A 174 874 62 HOH HOH . F 5 HOH A 175 875 38 HOH HOH . F 5 HOH A 176 876 78 HOH HOH . F 5 HOH A 177 877 199 HOH HOH . F 5 HOH A 178 878 65 HOH HOH . F 5 HOH A 179 879 144 HOH HOH . F 5 HOH A 180 880 110 HOH HOH . F 5 HOH A 181 881 26 HOH HOH . F 5 HOH A 182 882 64 HOH HOH . F 5 HOH A 183 883 76 HOH HOH . F 5 HOH A 184 884 130 HOH HOH . F 5 HOH A 185 885 50 HOH HOH . F 5 HOH A 186 886 165 HOH HOH . F 5 HOH A 187 887 82 HOH HOH . F 5 HOH A 188 888 215 HOH HOH . F 5 HOH A 189 889 95 HOH HOH . F 5 HOH A 190 890 108 HOH HOH . F 5 HOH A 191 891 114 HOH HOH . F 5 HOH A 192 892 201 HOH HOH . F 5 HOH A 193 893 204 HOH HOH . F 5 HOH A 194 894 159 HOH HOH . F 5 HOH A 195 895 166 HOH HOH . F 5 HOH A 196 896 192 HOH HOH . F 5 HOH A 197 897 55 HOH HOH . F 5 HOH A 198 898 169 HOH HOH . F 5 HOH A 199 899 189 HOH HOH . F 5 HOH A 200 900 97 HOH HOH . F 5 HOH A 201 901 178 HOH HOH . F 5 HOH A 202 902 177 HOH HOH . F 5 HOH A 203 903 172 HOH HOH . F 5 HOH A 204 904 158 HOH HOH . F 5 HOH A 205 905 203 HOH HOH . F 5 HOH A 206 906 206 HOH HOH . F 5 HOH A 207 907 181 HOH HOH . F 5 HOH A 208 908 156 HOH HOH . F 5 HOH A 209 909 128 HOH HOH . F 5 HOH A 210 910 133 HOH HOH . F 5 HOH A 211 911 20 HOH HOH . F 5 HOH A 212 912 84 HOH HOH . F 5 HOH A 213 913 194 HOH HOH . F 5 HOH A 214 914 191 HOH HOH . F 5 HOH A 215 915 56 HOH HOH . F 5 HOH A 216 916 150 HOH HOH . F 5 HOH A 217 917 209 HOH HOH . F 5 HOH A 218 918 134 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -18.26 _atom_site.Cartn_y 8.329 _atom_site.Cartn_z -0.995 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 86.55 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 603 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #