data_6XUY # _model_server_result.job_id XD8b3w6sY4Sh66kVDS1LFw _model_server_result.datetime_utc '2024-11-18 18:28:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xuy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 6XUY # _exptl.entry_id 6XUY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6XUY _cell.length_a 91.192 _cell.length_b 91.192 _cell.length_c 143.997 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XUY _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,Q 1 1 B,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 135 A CYS 141 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc2 A SG CYS 138 A CYS 144 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc3 A SG CYS 160 A CYS 166 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc4 A SG CYS 171 A CYS 177 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc5 B SG CYS 135 B CYS 141 1_555 L ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc6 B SG CYS 160 B CYS 166 1_555 L ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc7 B SG CYS 171 B CYS 177 1_555 L ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 299 n n C1 C2 PGE sing 300 n n C1 H1 PGE sing 301 n n C1 H12 PGE sing 302 n n O1 HO1 PGE sing 303 n n C2 O2 PGE sing 304 n n C2 H2 PGE sing 305 n n C2 H22 PGE sing 306 n n O2 C3 PGE sing 307 n n C3 C4 PGE sing 308 n n C3 H3 PGE sing 309 n n C3 H32 PGE sing 310 n n C4 O3 PGE sing 311 n n C4 H4 PGE sing 312 n n C4 H42 PGE sing 313 n n O4 C6 PGE sing 314 n n O4 HO4 PGE sing 315 n n C6 C5 PGE sing 316 n n C6 H6 PGE sing 317 n n C6 H62 PGE sing 318 n n C5 O3 PGE sing 319 n n C5 H5 PGE sing 320 n n C5 H52 PGE sing 321 n n # _atom_sites.entry_id 6XUY _atom_sites.fract_transf_matrix[1][1] 0.010966 _atom_sites.fract_transf_matrix[1][2] 0.006331 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012662 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006945 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AR6 A 1 401 500 AR6 AR6 . D 3 ZN A 1 402 501 ZN ZN . E 4 PGE A 1 403 601 PGE PGE . F 5 SO4 A 1 404 3 SO4 SO4 . G 5 SO4 A 1 405 5 SO4 SO4 . H 5 SO4 A 1 406 7 SO4 SO4 . I 5 SO4 A 1 407 8 SO4 SO4 . J 5 SO4 A 1 408 9 SO4 SO4 . K 2 AR6 B 1 401 500 AR6 AR6 . L 3 ZN B 1 402 501 ZN ZN . M 5 SO4 B 1 403 1 SO4 SO4 . N 5 SO4 B 1 404 2 SO4 SO4 . O 5 SO4 B 1 405 4 SO4 SO4 . P 5 SO4 B 1 406 6 SO4 SO4 . Q 6 HOH A 1 501 49 HOH HOH . Q 6 HOH A 2 502 18 HOH HOH . Q 6 HOH A 3 503 32 HOH HOH . Q 6 HOH A 4 504 19 HOH HOH . Q 6 HOH A 5 505 34 HOH HOH . Q 6 HOH A 6 506 17 HOH HOH . Q 6 HOH A 7 507 2 HOH HOH . Q 6 HOH A 8 508 11 HOH HOH . Q 6 HOH A 9 509 29 HOH HOH . Q 6 HOH A 10 510 3 HOH HOH . Q 6 HOH A 11 511 46 HOH HOH . Q 6 HOH A 12 512 41 HOH HOH . Q 6 HOH A 13 513 25 HOH HOH . Q 6 HOH A 14 514 36 HOH HOH . Q 6 HOH A 15 515 24 HOH HOH . Q 6 HOH A 16 516 27 HOH HOH . Q 6 HOH A 17 517 10 HOH HOH . Q 6 HOH A 18 518 35 HOH HOH . Q 6 HOH A 19 519 21 HOH HOH . Q 6 HOH A 20 520 16 HOH HOH . Q 6 HOH A 21 521 8 HOH HOH . Q 6 HOH A 22 522 43 HOH HOH . Q 6 HOH A 23 523 48 HOH HOH . Q 6 HOH A 24 524 5 HOH HOH . Q 6 HOH A 25 525 4 HOH HOH . Q 6 HOH A 26 526 38 HOH HOH . Q 6 HOH A 27 527 1 HOH HOH . Q 6 HOH A 28 528 31 HOH HOH . Q 6 HOH A 29 529 12 HOH HOH . Q 6 HOH A 30 530 13 HOH HOH . Q 6 HOH A 31 531 15 HOH HOH . R 6 HOH B 1 501 42 HOH HOH . R 6 HOH B 2 502 40 HOH HOH . R 6 HOH B 3 503 23 HOH HOH . R 6 HOH B 4 504 44 HOH HOH . R 6 HOH B 5 505 28 HOH HOH . R 6 HOH B 6 506 30 HOH HOH . R 6 HOH B 7 507 39 HOH HOH . R 6 HOH B 8 508 47 HOH HOH . R 6 HOH B 9 509 37 HOH HOH . R 6 HOH B 10 510 14 HOH HOH . R 6 HOH B 11 511 9 HOH HOH . R 6 HOH B 12 512 33 HOH HOH . R 6 HOH B 13 513 45 HOH HOH . R 6 HOH B 14 514 6 HOH HOH . R 6 HOH B 15 515 22 HOH HOH . R 6 HOH B 16 516 7 HOH HOH . R 6 HOH B 17 517 20 HOH HOH . R 6 HOH B 18 518 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . E 4 -28.344 22.294 3.964 1 57.29 ? C1 PGE 403 A 1 HETATM 2 O O1 PGE . . . E 4 -29.092 21.142 3.977 1 50.48 ? O1 PGE 403 A 1 HETATM 3 C C2 PGE . . . E 4 -28.191 22.819 5.33 1 55.97 ? C2 PGE 403 A 1 HETATM 4 O O2 PGE . . . E 4 -27.966 21.749 6.245 1 47.66 ? O2 PGE 403 A 1 HETATM 5 C C3 PGE . . . E 4 -27.993 22.183 7.612 1 53.34 ? C3 PGE 403 A 1 HETATM 6 C C4 PGE . . . E 4 -27.285 23.491 7.721 1 48.22 ? C4 PGE 403 A 1 HETATM 7 O O4 PGE . . . E 4 -27.228 25.595 11.6 1 50.62 ? O4 PGE 403 A 1 HETATM 8 C C6 PGE . . . E 4 -27.951 25.784 10.388 1 47.09 ? C6 PGE 403 A 1 HETATM 9 C C5 PGE . . . E 4 -27.187 25.356 9.171 1 43.96 ? C5 PGE 403 A 1 HETATM 10 O O3 PGE . . . E 4 -27.341 23.95 9.05 1 53.56 ? O3 PGE 403 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #