data_6XV1 # _model_server_result.job_id IjhUd9Lf-6NWojeN-qVBgg _model_server_result.datetime_utc '2024-11-18 18:38:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xv1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":403}' # _entry.id 6XV1 # _exptl.entry_id 6XV1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6XV1 _cell.length_a 91.175 _cell.length_b 91.175 _cell.length_c 143.584 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XV1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,P 1 1 B,K,L,M,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 M N N ? 5 N N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 135 A CYS 141 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc2 A SG CYS 138 A CYS 144 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc3 A SG CYS 160 A CYS 166 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc4 A SG CYS 171 A CYS 177 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc5 B SG CYS 135 B CYS 141 1_555 L ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc6 B SG CYS 138 B CYS 144 1_555 L ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc7 B SG CYS 160 B CYS 166 1_555 L ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc8 B SG CYS 171 B CYS 177 1_555 L ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 402 n n S O2 SO4 doub 403 n n S O3 SO4 sing 404 n n S O4 SO4 sing 405 n n # _atom_sites.entry_id 6XV1 _atom_sites.fract_transf_matrix[1][1] 0.010968 _atom_sites.fract_transf_matrix[1][2] 0.006332 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012665 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006965 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AR6 A 1 401 500 AR6 AR6 . D 3 ZN A 1 402 501 ZN ZN . E 4 8L9 A 1 403 601 8L9 LIG . F 5 SO4 A 1 404 3 SO4 SO4 . G 5 SO4 A 1 405 4 SO4 SO4 . H 5 SO4 A 1 406 6 SO4 SO4 . I 5 SO4 A 1 407 7 SO4 SO4 . J 5 SO4 A 1 408 8 SO4 SO4 . K 2 AR6 B 1 401 500 AR6 AR6 . L 3 ZN B 1 402 501 ZN ZN . M 5 SO4 B 1 403 1 SO4 SO4 . N 5 SO4 B 1 404 2 SO4 SO4 . O 5 SO4 B 1 405 5 SO4 SO4 . P 6 HOH A 1 501 33 HOH HOH . P 6 HOH A 2 502 11 HOH HOH . P 6 HOH A 3 503 71 HOH HOH . P 6 HOH A 4 504 57 HOH HOH . P 6 HOH A 5 505 22 HOH HOH . P 6 HOH A 6 506 30 HOH HOH . P 6 HOH A 7 507 63 HOH HOH . P 6 HOH A 8 508 32 HOH HOH . P 6 HOH A 9 509 15 HOH HOH . P 6 HOH A 10 510 75 HOH HOH . P 6 HOH A 11 511 53 HOH HOH . P 6 HOH A 12 512 46 HOH HOH . P 6 HOH A 13 513 21 HOH HOH . P 6 HOH A 14 514 1 HOH HOH . P 6 HOH A 15 515 76 HOH HOH . P 6 HOH A 16 516 41 HOH HOH . P 6 HOH A 17 517 45 HOH HOH . P 6 HOH A 18 518 37 HOH HOH . P 6 HOH A 19 519 70 HOH HOH . P 6 HOH A 20 520 8 HOH HOH . P 6 HOH A 21 521 23 HOH HOH . P 6 HOH A 22 522 67 HOH HOH . P 6 HOH A 23 523 17 HOH HOH . P 6 HOH A 24 524 84 HOH HOH . P 6 HOH A 25 525 27 HOH HOH . P 6 HOH A 26 526 24 HOH HOH . P 6 HOH A 27 527 12 HOH HOH . P 6 HOH A 28 528 60 HOH HOH . P 6 HOH A 29 529 10 HOH HOH . P 6 HOH A 30 530 3 HOH HOH . P 6 HOH A 31 531 40 HOH HOH . P 6 HOH A 32 532 44 HOH HOH . P 6 HOH A 33 533 31 HOH HOH . P 6 HOH A 34 534 2 HOH HOH . P 6 HOH A 35 535 39 HOH HOH . P 6 HOH A 36 536 25 HOH HOH . P 6 HOH A 37 537 14 HOH HOH . P 6 HOH A 38 538 74 HOH HOH . P 6 HOH A 39 539 51 HOH HOH . P 6 HOH A 40 540 35 HOH HOH . P 6 HOH A 41 541 77 HOH HOH . P 6 HOH A 42 542 52 HOH HOH . P 6 HOH A 43 543 73 HOH HOH . P 6 HOH A 44 544 26 HOH HOH . P 6 HOH A 45 545 20 HOH HOH . P 6 HOH A 46 546 62 HOH HOH . P 6 HOH A 47 547 56 HOH HOH . P 6 HOH A 48 548 43 HOH HOH . P 6 HOH A 49 549 69 HOH HOH . P 6 HOH A 50 550 29 HOH HOH . P 6 HOH A 51 551 61 HOH HOH . P 6 HOH A 52 552 58 HOH HOH . P 6 HOH A 53 553 80 HOH HOH . P 6 HOH A 54 554 82 HOH HOH . P 6 HOH A 55 555 81 HOH HOH . P 6 HOH A 56 556 78 HOH HOH . Q 6 HOH B 1 501 86 HOH HOH . Q 6 HOH B 2 502 85 HOH HOH . Q 6 HOH B 3 503 87 HOH HOH . Q 6 HOH B 4 504 36 HOH HOH . Q 6 HOH B 5 505 16 HOH HOH . Q 6 HOH B 6 506 66 HOH HOH . Q 6 HOH B 7 507 65 HOH HOH . Q 6 HOH B 8 508 18 HOH HOH . Q 6 HOH B 9 509 64 HOH HOH . Q 6 HOH B 10 510 59 HOH HOH . Q 6 HOH B 11 511 5 HOH HOH . Q 6 HOH B 12 512 48 HOH HOH . Q 6 HOH B 13 513 42 HOH HOH . Q 6 HOH B 14 514 54 HOH HOH . Q 6 HOH B 15 515 34 HOH HOH . Q 6 HOH B 16 516 55 HOH HOH . Q 6 HOH B 17 517 9 HOH HOH . Q 6 HOH B 18 518 49 HOH HOH . Q 6 HOH B 19 519 13 HOH HOH . Q 6 HOH B 20 520 7 HOH HOH . Q 6 HOH B 21 521 50 HOH HOH . Q 6 HOH B 22 522 68 HOH HOH . Q 6 HOH B 23 523 4 HOH HOH . Q 6 HOH B 24 524 6 HOH HOH . Q 6 HOH B 25 525 72 HOH HOH . Q 6 HOH B 26 526 83 HOH HOH . Q 6 HOH B 27 527 47 HOH HOH . Q 6 HOH B 28 528 38 HOH HOH . Q 6 HOH B 29 529 19 HOH HOH . Q 6 HOH B 30 530 28 HOH HOH . Q 6 HOH B 31 531 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . M 5 -30.543 21.259 30.467 1 47.05 ? S SO4 403 B 1 HETATM 2 O O1 SO4 . . . M 5 -30.708 19.842 30.215 1 45.67 ? O1 SO4 403 B 1 HETATM 3 O O2 SO4 . . . M 5 -30.194 21.903 29.194 1 52.24 ? O2 SO4 403 B 1 HETATM 4 O O3 SO4 . . . M 5 -29.53 21.479 31.457 1 53.74 ? O3 SO4 403 B 1 HETATM 5 O O4 SO4 . . . M 5 -31.767 21.853 30.876 1 55.79 ? O4 SO4 403 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #