data_6XVQ # _model_server_result.job_id JdHUfJO9ndvaqseoBgxayQ _model_server_result.datetime_utc '2024-11-01 23:32:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xvq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6XVQ # _exptl.entry_id 6XVQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XVQ _cell.length_a 58.24 _cell.length_b 58.24 _cell.length_c 102.19 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XVQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 6XVQ _atom_sites.fract_transf_matrix[1][1] 0.01717 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01717 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009786 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 201 1134 PLM PLM . C 3 CIT A 1 202 1 CIT CIT . D 4 HOH A 1 301 217 HOH HOH . D 4 HOH A 2 302 91 HOH HOH . D 4 HOH A 3 303 265 HOH HOH . D 4 HOH A 4 304 81 HOH HOH . D 4 HOH A 5 305 205 HOH HOH . D 4 HOH A 6 306 116 HOH HOH . D 4 HOH A 7 307 182 HOH HOH . D 4 HOH A 8 308 178 HOH HOH . D 4 HOH A 9 309 204 HOH HOH . D 4 HOH A 10 310 129 HOH HOH . D 4 HOH A 11 311 100 HOH HOH . D 4 HOH A 12 312 262 HOH HOH . D 4 HOH A 13 313 72 HOH HOH . D 4 HOH A 14 314 225 HOH HOH . D 4 HOH A 15 315 256 HOH HOH . D 4 HOH A 16 316 166 HOH HOH . D 4 HOH A 17 317 214 HOH HOH . D 4 HOH A 18 318 174 HOH HOH . D 4 HOH A 19 319 24 HOH HOH . D 4 HOH A 20 320 209 HOH HOH . D 4 HOH A 21 321 112 HOH HOH . D 4 HOH A 22 322 155 HOH HOH . D 4 HOH A 23 323 258 HOH HOH . D 4 HOH A 24 324 143 HOH HOH . D 4 HOH A 25 325 22 HOH HOH . D 4 HOH A 26 326 124 HOH HOH . D 4 HOH A 27 327 121 HOH HOH . D 4 HOH A 28 328 151 HOH HOH . D 4 HOH A 29 329 94 HOH HOH . D 4 HOH A 30 330 34 HOH HOH . D 4 HOH A 31 331 253 HOH HOH . D 4 HOH A 32 332 95 HOH HOH . D 4 HOH A 33 333 96 HOH HOH . D 4 HOH A 34 334 142 HOH HOH . D 4 HOH A 35 335 53 HOH HOH . D 4 HOH A 36 336 43 HOH HOH . D 4 HOH A 37 337 48 HOH HOH . D 4 HOH A 38 338 55 HOH HOH . D 4 HOH A 39 339 37 HOH HOH . D 4 HOH A 40 340 79 HOH HOH . D 4 HOH A 41 341 16 HOH HOH . D 4 HOH A 42 342 172 HOH HOH . D 4 HOH A 43 343 257 HOH HOH . D 4 HOH A 44 344 255 HOH HOH . D 4 HOH A 45 345 212 HOH HOH . D 4 HOH A 46 346 23 HOH HOH . D 4 HOH A 47 347 41 HOH HOH . D 4 HOH A 48 348 6 HOH HOH . D 4 HOH A 49 349 49 HOH HOH . D 4 HOH A 50 350 128 HOH HOH . D 4 HOH A 51 351 122 HOH HOH . D 4 HOH A 52 352 215 HOH HOH . D 4 HOH A 53 353 171 HOH HOH . D 4 HOH A 54 354 111 HOH HOH . D 4 HOH A 55 355 73 HOH HOH . D 4 HOH A 56 356 2 HOH HOH . D 4 HOH A 57 357 8 HOH HOH . D 4 HOH A 58 358 260 HOH HOH . D 4 HOH A 59 359 27 HOH HOH . D 4 HOH A 60 360 132 HOH HOH . D 4 HOH A 61 361 89 HOH HOH . D 4 HOH A 62 362 39 HOH HOH . D 4 HOH A 63 363 232 HOH HOH . D 4 HOH A 64 364 88 HOH HOH . D 4 HOH A 65 365 67 HOH HOH . D 4 HOH A 66 366 29 HOH HOH . D 4 HOH A 67 367 66 HOH HOH . D 4 HOH A 68 368 40 HOH HOH . D 4 HOH A 69 369 220 HOH HOH . D 4 HOH A 70 370 46 HOH HOH . D 4 HOH A 71 371 70 HOH HOH . D 4 HOH A 72 372 45 HOH HOH . D 4 HOH A 73 373 57 HOH HOH . D 4 HOH A 74 374 97 HOH HOH . D 4 HOH A 75 375 226 HOH HOH . D 4 HOH A 76 376 170 HOH HOH . D 4 HOH A 77 377 223 HOH HOH . D 4 HOH A 78 378 5 HOH HOH . D 4 HOH A 79 379 21 HOH HOH . D 4 HOH A 80 380 31 HOH HOH . D 4 HOH A 81 381 231 HOH HOH . D 4 HOH A 82 382 193 HOH HOH . D 4 HOH A 83 383 118 HOH HOH . D 4 HOH A 84 384 188 HOH HOH . D 4 HOH A 85 385 19 HOH HOH . D 4 HOH A 86 386 44 HOH HOH . D 4 HOH A 87 387 251 HOH HOH . D 4 HOH A 88 388 13 HOH HOH . D 4 HOH A 89 389 99 HOH HOH . D 4 HOH A 90 390 197 HOH HOH . D 4 HOH A 91 391 61 HOH HOH . D 4 HOH A 92 392 14 HOH HOH . D 4 HOH A 93 393 50 HOH HOH . D 4 HOH A 94 394 109 HOH HOH . D 4 HOH A 95 395 102 HOH HOH . D 4 HOH A 96 396 224 HOH HOH . D 4 HOH A 97 397 10 HOH HOH . D 4 HOH A 98 398 30 HOH HOH . D 4 HOH A 99 399 12 HOH HOH . D 4 HOH A 100 400 26 HOH HOH . D 4 HOH A 101 401 9 HOH HOH . D 4 HOH A 102 402 35 HOH HOH . D 4 HOH A 103 403 98 HOH HOH . D 4 HOH A 104 404 123 HOH HOH . D 4 HOH A 105 405 105 HOH HOH . D 4 HOH A 106 406 103 HOH HOH . D 4 HOH A 107 407 11 HOH HOH . D 4 HOH A 108 408 263 HOH HOH . D 4 HOH A 109 409 211 HOH HOH . D 4 HOH A 110 410 248 HOH HOH . D 4 HOH A 111 411 107 HOH HOH . D 4 HOH A 112 412 90 HOH HOH . D 4 HOH A 113 413 190 HOH HOH . D 4 HOH A 114 414 160 HOH HOH . D 4 HOH A 115 415 165 HOH HOH . D 4 HOH A 116 416 54 HOH HOH . D 4 HOH A 117 417 163 HOH HOH . D 4 HOH A 118 418 32 HOH HOH . D 4 HOH A 119 419 69 HOH HOH . D 4 HOH A 120 420 60 HOH HOH . D 4 HOH A 121 421 266 HOH HOH . D 4 HOH A 122 422 17 HOH HOH . D 4 HOH A 123 423 62 HOH HOH . D 4 HOH A 124 424 189 HOH HOH . D 4 HOH A 125 425 195 HOH HOH . D 4 HOH A 126 426 218 HOH HOH . D 4 HOH A 127 427 106 HOH HOH . D 4 HOH A 128 428 20 HOH HOH . D 4 HOH A 129 429 80 HOH HOH . D 4 HOH A 130 430 261 HOH HOH . D 4 HOH A 131 431 63 HOH HOH . D 4 HOH A 132 432 64 HOH HOH . D 4 HOH A 133 433 131 HOH HOH . D 4 HOH A 134 434 18 HOH HOH . D 4 HOH A 135 435 77 HOH HOH . D 4 HOH A 136 436 127 HOH HOH . D 4 HOH A 137 437 38 HOH HOH . D 4 HOH A 138 438 56 HOH HOH . D 4 HOH A 139 439 157 HOH HOH . D 4 HOH A 140 440 51 HOH HOH . D 4 HOH A 141 441 47 HOH HOH . D 4 HOH A 142 442 254 HOH HOH . D 4 HOH A 143 443 59 HOH HOH . D 4 HOH A 144 444 162 HOH HOH . D 4 HOH A 145 445 36 HOH HOH . D 4 HOH A 146 446 164 HOH HOH . D 4 HOH A 147 447 125 HOH HOH . D 4 HOH A 148 448 52 HOH HOH . D 4 HOH A 149 449 87 HOH HOH . D 4 HOH A 150 450 86 HOH HOH . D 4 HOH A 151 451 119 HOH HOH . D 4 HOH A 152 452 114 HOH HOH . D 4 HOH A 153 453 25 HOH HOH . D 4 HOH A 154 454 259 HOH HOH . D 4 HOH A 155 455 65 HOH HOH . D 4 HOH A 156 456 33 HOH HOH . D 4 HOH A 157 457 202 HOH HOH . D 4 HOH A 158 458 3 HOH HOH . D 4 HOH A 159 459 82 HOH HOH . D 4 HOH A 160 460 252 HOH HOH . D 4 HOH A 161 461 173 HOH HOH . D 4 HOH A 162 462 149 HOH HOH . D 4 HOH A 163 463 243 HOH HOH . D 4 HOH A 164 464 4 HOH HOH . D 4 HOH A 165 465 229 HOH HOH . D 4 HOH A 166 466 196 HOH HOH . D 4 HOH A 167 467 93 HOH HOH . D 4 HOH A 168 468 85 HOH HOH . D 4 HOH A 169 469 126 HOH HOH . D 4 HOH A 170 470 152 HOH HOH . D 4 HOH A 171 471 222 HOH HOH . D 4 HOH A 172 472 133 HOH HOH . D 4 HOH A 173 473 175 HOH HOH . D 4 HOH A 174 474 75 HOH HOH . D 4 HOH A 175 475 210 HOH HOH . D 4 HOH A 176 476 249 HOH HOH . D 4 HOH A 177 477 234 HOH HOH . D 4 HOH A 178 478 137 HOH HOH . D 4 HOH A 179 479 150 HOH HOH . D 4 HOH A 180 480 250 HOH HOH . D 4 HOH A 181 481 156 HOH HOH . D 4 HOH A 182 482 240 HOH HOH . D 4 HOH A 183 483 140 HOH HOH . D 4 HOH A 184 484 264 HOH HOH . D 4 HOH A 185 485 246 HOH HOH . D 4 HOH A 186 486 153 HOH HOH . D 4 HOH A 187 487 161 HOH HOH . D 4 HOH A 188 488 130 HOH HOH . D 4 HOH A 189 489 146 HOH HOH . D 4 HOH A 190 490 108 HOH HOH . D 4 HOH A 191 491 206 HOH HOH . D 4 HOH A 192 492 115 HOH HOH . D 4 HOH A 193 493 219 HOH HOH . D 4 HOH A 194 494 120 HOH HOH . D 4 HOH A 195 495 84 HOH HOH . D 4 HOH A 196 496 167 HOH HOH . D 4 HOH A 197 497 58 HOH HOH . D 4 HOH A 198 498 221 HOH HOH . D 4 HOH A 199 499 176 HOH HOH . D 4 HOH A 200 500 138 HOH HOH . D 4 HOH A 201 501 245 HOH HOH . D 4 HOH A 202 502 239 HOH HOH . D 4 HOH A 203 503 207 HOH HOH . D 4 HOH A 204 504 198 HOH HOH . D 4 HOH A 205 505 169 HOH HOH . D 4 HOH A 206 506 147 HOH HOH . D 4 HOH A 207 507 7 HOH HOH . D 4 HOH A 208 508 71 HOH HOH . D 4 HOH A 209 509 113 HOH HOH . D 4 HOH A 210 510 237 HOH HOH . D 4 HOH A 211 511 191 HOH HOH . D 4 HOH A 212 512 185 HOH HOH . D 4 HOH A 213 513 168 HOH HOH . D 4 HOH A 214 514 235 HOH HOH . D 4 HOH A 215 515 83 HOH HOH . D 4 HOH A 216 516 144 HOH HOH . D 4 HOH A 217 517 216 HOH HOH . D 4 HOH A 218 518 180 HOH HOH . D 4 HOH A 219 519 241 HOH HOH . D 4 HOH A 220 520 236 HOH HOH . D 4 HOH A 221 521 92 HOH HOH . D 4 HOH A 222 522 74 HOH HOH . D 4 HOH A 223 523 159 HOH HOH . D 4 HOH A 224 524 179 HOH HOH . D 4 HOH A 225 525 199 HOH HOH . D 4 HOH A 226 526 227 HOH HOH . D 4 HOH A 227 527 230 HOH HOH . D 4 HOH A 228 528 154 HOH HOH . D 4 HOH A 229 529 201 HOH HOH . D 4 HOH A 230 530 186 HOH HOH . D 4 HOH A 231 531 141 HOH HOH . D 4 HOH A 232 532 213 HOH HOH . D 4 HOH A 233 533 228 HOH HOH . D 4 HOH A 234 534 117 HOH HOH . D 4 HOH A 235 535 101 HOH HOH . D 4 HOH A 236 536 242 HOH HOH . D 4 HOH A 237 537 110 HOH HOH . D 4 HOH A 238 538 177 HOH HOH . D 4 HOH A 239 539 187 HOH HOH . D 4 HOH A 240 540 208 HOH HOH . D 4 HOH A 241 541 148 HOH HOH . D 4 HOH A 242 542 203 HOH HOH . D 4 HOH A 243 543 238 HOH HOH . D 4 HOH A 244 544 194 HOH HOH . D 4 HOH A 245 545 135 HOH HOH . D 4 HOH A 246 546 247 HOH HOH . D 4 HOH A 247 547 233 HOH HOH . D 4 HOH A 248 548 200 HOH HOH . D 4 HOH A 249 549 136 HOH HOH . D 4 HOH A 250 550 104 HOH HOH . D 4 HOH A 251 551 158 HOH HOH . D 4 HOH A 252 552 244 HOH HOH . D 4 HOH A 253 553 181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . C 3 -21.121 -15.16 5.968 1 24.98 ? C1 CIT 202 A 1 HETATM 2 O O1 CIT . . . C 3 -21.464 -16.244 5.437 1 22.3 ? O1 CIT 202 A 1 HETATM 3 O O2 CIT . . . C 3 -20.028 -15.116 6.588 1 19.96 ? O2 CIT 202 A 1 HETATM 4 C C2 CIT . . . C 3 -21.993 -13.928 5.827 1 22.29 ? C2 CIT 202 A 1 HETATM 5 C C3 CIT . . . C 3 -21.783 -12.937 6.98 1 20.55 ? C3 CIT 202 A 1 HETATM 6 O O7 CIT . . . C 3 -20.362 -12.746 7.191 1 21.16 ? O7 CIT 202 A 1 HETATM 7 C C4 CIT . . . C 3 -22.444 -11.584 6.702 1 18.97 ? C4 CIT 202 A 1 HETATM 8 C C5 CIT . . . C 3 -22.107 -10.812 5.433 1 18.08 ? C5 CIT 202 A 1 HETATM 9 O O3 CIT . . . C 3 -21.197 -11.116 4.615 1 14.82 ? O3 CIT 202 A 1 HETATM 10 O O4 CIT . . . C 3 -22.779 -9.78 5.217 1 12.29 ? O4 CIT 202 A 1 HETATM 11 C C6 CIT . . . C 3 -22.432 -13.411 8.289 1 22.67 ? C6 CIT 202 A 1 HETATM 12 O O5 CIT . . . C 3 -23.434 -14.167 8.258 1 18.47 ? O5 CIT 202 A 1 HETATM 13 O O6 CIT . . . C 3 -22.03 -13.017 9.418 1 12.57 ? O6 CIT 202 A 1 HETATM 14 H H21 CIT . . . C 3 -23.04 -14.232 5.802 1 26.75 ? H21 CIT 202 A 1 HETATM 15 H H22 CIT . . . C 3 -21.765 -13.434 4.883 1 26.75 ? H22 CIT 202 A 1 HETATM 16 H HO7 CIT . . . C 3 -20.114 -13.088 8.075 1 25.39 ? HO7 CIT 202 A 1 HETATM 17 H H41 CIT . . . C 3 -23.521 -11.749 6.699 1 22.76 ? H41 CIT 202 A 1 HETATM 18 H H42 CIT . . . C 3 -22.207 -10.934 7.544 1 22.76 ? H42 CIT 202 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 18 #