data_6XVR # _model_server_result.job_id 3J5GISWLKnKoXSDSRxG_Mw _model_server_result.datetime_utc '2024-11-02 01:34:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xvr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6XVR # _exptl.entry_id 6XVR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XVR _cell.length_a 65.83 _cell.length_b 65.83 _cell.length_c 101.32 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XVR _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 239 n n C1 O2 PLM doub 240 n n C1 C2 PLM sing 241 n n O1 H PLM sing 242 n n C2 C3 PLM sing 243 n n C2 H21 PLM sing 244 n n C2 H22 PLM sing 245 n n C3 C4 PLM sing 246 n n C3 H31 PLM sing 247 n n C3 H32 PLM sing 248 n n C4 C5 PLM sing 249 n n C4 H41 PLM sing 250 n n C4 H42 PLM sing 251 n n C5 C6 PLM sing 252 n n C5 H51 PLM sing 253 n n C5 H52 PLM sing 254 n n C6 C7 PLM sing 255 n n C6 H61 PLM sing 256 n n C6 H62 PLM sing 257 n n C7 C8 PLM sing 258 n n C7 H71 PLM sing 259 n n C7 H72 PLM sing 260 n n C8 C9 PLM sing 261 n n C8 H81 PLM sing 262 n n C8 H82 PLM sing 263 n n C9 CA PLM sing 264 n n C9 H91 PLM sing 265 n n C9 H92 PLM sing 266 n n CA CB PLM sing 267 n n CA HA1 PLM sing 268 n n CA HA2 PLM sing 269 n n CB CC PLM sing 270 n n CB HB1 PLM sing 271 n n CB HB2 PLM sing 272 n n CC CD PLM sing 273 n n CC HC1 PLM sing 274 n n CC HC2 PLM sing 275 n n CD CE PLM sing 276 n n CD HD1 PLM sing 277 n n CD HD2 PLM sing 278 n n CE CF PLM sing 279 n n CE HE1 PLM sing 280 n n CE HE2 PLM sing 281 n n CF CG PLM sing 282 n n CF HF1 PLM sing 283 n n CF HF2 PLM sing 284 n n CG HG1 PLM sing 285 n n CG HG2 PLM sing 286 n n CG HG3 PLM sing 287 n n # _atom_sites.entry_id 6XVR _atom_sites.fract_transf_matrix[1][1] 0.015191 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015191 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00987 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 201 1 PLM PLM . C 3 SO4 A 1 202 1 SO4 SO4 . D 3 SO4 A 1 203 2 SO4 SO4 . E 3 SO4 A 1 204 3 SO4 SO4 . F 4 HOH A 1 301 33 HOH HOH . F 4 HOH A 2 302 94 HOH HOH . F 4 HOH A 3 303 4 HOH HOH . F 4 HOH A 4 304 136 HOH HOH . F 4 HOH A 5 305 52 HOH HOH . F 4 HOH A 6 306 24 HOH HOH . F 4 HOH A 7 307 101 HOH HOH . F 4 HOH A 8 308 16 HOH HOH . F 4 HOH A 9 309 51 HOH HOH . F 4 HOH A 10 310 30 HOH HOH . F 4 HOH A 11 311 61 HOH HOH . F 4 HOH A 12 312 35 HOH HOH . F 4 HOH A 13 313 187 HOH HOH . F 4 HOH A 14 314 3 HOH HOH . F 4 HOH A 15 315 10 HOH HOH . F 4 HOH A 16 316 83 HOH HOH . F 4 HOH A 17 317 75 HOH HOH . F 4 HOH A 18 318 5 HOH HOH . F 4 HOH A 19 319 13 HOH HOH . F 4 HOH A 20 320 28 HOH HOH . F 4 HOH A 21 321 68 HOH HOH . F 4 HOH A 22 322 15 HOH HOH . F 4 HOH A 23 323 91 HOH HOH . F 4 HOH A 24 324 49 HOH HOH . F 4 HOH A 25 325 71 HOH HOH . F 4 HOH A 26 326 171 HOH HOH . F 4 HOH A 27 327 34 HOH HOH . F 4 HOH A 28 328 64 HOH HOH . F 4 HOH A 29 329 21 HOH HOH . F 4 HOH A 30 330 57 HOH HOH . F 4 HOH A 31 331 174 HOH HOH . F 4 HOH A 32 332 36 HOH HOH . F 4 HOH A 33 333 39 HOH HOH . F 4 HOH A 34 334 18 HOH HOH . F 4 HOH A 35 335 56 HOH HOH . F 4 HOH A 36 336 110 HOH HOH . F 4 HOH A 37 337 108 HOH HOH . F 4 HOH A 38 338 8 HOH HOH . F 4 HOH A 39 339 88 HOH HOH . F 4 HOH A 40 340 189 HOH HOH . F 4 HOH A 41 341 47 HOH HOH . F 4 HOH A 42 342 118 HOH HOH . F 4 HOH A 43 343 62 HOH HOH . F 4 HOH A 44 344 154 HOH HOH . F 4 HOH A 45 345 12 HOH HOH . F 4 HOH A 46 346 29 HOH HOH . F 4 HOH A 47 347 107 HOH HOH . F 4 HOH A 48 348 50 HOH HOH . F 4 HOH A 49 349 19 HOH HOH . F 4 HOH A 50 350 46 HOH HOH . F 4 HOH A 51 351 90 HOH HOH . F 4 HOH A 52 352 140 HOH HOH . F 4 HOH A 53 353 138 HOH HOH . F 4 HOH A 54 354 31 HOH HOH . F 4 HOH A 55 355 96 HOH HOH . F 4 HOH A 56 356 81 HOH HOH . F 4 HOH A 57 357 22 HOH HOH . F 4 HOH A 58 358 180 HOH HOH . F 4 HOH A 59 359 65 HOH HOH . F 4 HOH A 60 360 2 HOH HOH . F 4 HOH A 61 361 40 HOH HOH . F 4 HOH A 62 362 66 HOH HOH . F 4 HOH A 63 363 45 HOH HOH . F 4 HOH A 64 364 72 HOH HOH . F 4 HOH A 65 365 38 HOH HOH . F 4 HOH A 66 366 166 HOH HOH . F 4 HOH A 67 367 115 HOH HOH . F 4 HOH A 68 368 123 HOH HOH . F 4 HOH A 69 369 99 HOH HOH . F 4 HOH A 70 370 70 HOH HOH . F 4 HOH A 71 371 27 HOH HOH . F 4 HOH A 72 372 79 HOH HOH . F 4 HOH A 73 373 142 HOH HOH . F 4 HOH A 74 374 85 HOH HOH . F 4 HOH A 75 375 23 HOH HOH . F 4 HOH A 76 376 106 HOH HOH . F 4 HOH A 77 377 44 HOH HOH . F 4 HOH A 78 378 137 HOH HOH . F 4 HOH A 79 379 130 HOH HOH . F 4 HOH A 80 380 74 HOH HOH . F 4 HOH A 81 381 159 HOH HOH . F 4 HOH A 82 382 53 HOH HOH . F 4 HOH A 83 383 109 HOH HOH . F 4 HOH A 84 384 41 HOH HOH . F 4 HOH A 85 385 152 HOH HOH . F 4 HOH A 86 386 95 HOH HOH . F 4 HOH A 87 387 76 HOH HOH . F 4 HOH A 88 388 6 HOH HOH . F 4 HOH A 89 389 43 HOH HOH . F 4 HOH A 90 390 113 HOH HOH . F 4 HOH A 91 391 20 HOH HOH . F 4 HOH A 92 392 135 HOH HOH . F 4 HOH A 93 393 26 HOH HOH . F 4 HOH A 94 394 87 HOH HOH . F 4 HOH A 95 395 158 HOH HOH . F 4 HOH A 96 396 153 HOH HOH . F 4 HOH A 97 397 7 HOH HOH . F 4 HOH A 98 398 78 HOH HOH . F 4 HOH A 99 399 119 HOH HOH . F 4 HOH A 100 400 117 HOH HOH . F 4 HOH A 101 401 67 HOH HOH . F 4 HOH A 102 402 80 HOH HOH . F 4 HOH A 103 403 86 HOH HOH . F 4 HOH A 104 404 169 HOH HOH . F 4 HOH A 105 405 63 HOH HOH . F 4 HOH A 106 406 58 HOH HOH . F 4 HOH A 107 407 186 HOH HOH . F 4 HOH A 108 408 183 HOH HOH . F 4 HOH A 109 409 37 HOH HOH . F 4 HOH A 110 410 73 HOH HOH . F 4 HOH A 111 411 69 HOH HOH . F 4 HOH A 112 412 144 HOH HOH . F 4 HOH A 113 413 120 HOH HOH . F 4 HOH A 114 414 100 HOH HOH . F 4 HOH A 115 415 132 HOH HOH . F 4 HOH A 116 416 84 HOH HOH . F 4 HOH A 117 417 116 HOH HOH . F 4 HOH A 118 418 175 HOH HOH . F 4 HOH A 119 419 165 HOH HOH . F 4 HOH A 120 420 167 HOH HOH . F 4 HOH A 121 421 133 HOH HOH . F 4 HOH A 122 422 77 HOH HOH . F 4 HOH A 123 423 164 HOH HOH . F 4 HOH A 124 424 147 HOH HOH . F 4 HOH A 125 425 139 HOH HOH . F 4 HOH A 126 426 93 HOH HOH . F 4 HOH A 127 427 185 HOH HOH . F 4 HOH A 128 428 172 HOH HOH . F 4 HOH A 129 429 162 HOH HOH . F 4 HOH A 130 430 25 HOH HOH . F 4 HOH A 131 431 131 HOH HOH . F 4 HOH A 132 432 114 HOH HOH . F 4 HOH A 133 433 121 HOH HOH . F 4 HOH A 134 434 103 HOH HOH . F 4 HOH A 135 435 157 HOH HOH . F 4 HOH A 136 436 173 HOH HOH . F 4 HOH A 137 437 155 HOH HOH . F 4 HOH A 138 438 98 HOH HOH . F 4 HOH A 139 439 151 HOH HOH . F 4 HOH A 140 440 127 HOH HOH . F 4 HOH A 141 441 11 HOH HOH . F 4 HOH A 142 442 92 HOH HOH . F 4 HOH A 143 443 122 HOH HOH . F 4 HOH A 144 444 156 HOH HOH . F 4 HOH A 145 445 134 HOH HOH . F 4 HOH A 146 446 179 HOH HOH . F 4 HOH A 147 447 170 HOH HOH . F 4 HOH A 148 448 161 HOH HOH . F 4 HOH A 149 449 102 HOH HOH . F 4 HOH A 150 450 89 HOH HOH . F 4 HOH A 151 451 160 HOH HOH . F 4 HOH A 152 452 177 HOH HOH . F 4 HOH A 153 453 125 HOH HOH . F 4 HOH A 154 454 178 HOH HOH . F 4 HOH A 155 455 60 HOH HOH . F 4 HOH A 156 456 149 HOH HOH . F 4 HOH A 157 457 150 HOH HOH . F 4 HOH A 158 458 104 HOH HOH . F 4 HOH A 159 459 32 HOH HOH . F 4 HOH A 160 460 128 HOH HOH . F 4 HOH A 161 461 163 HOH HOH . F 4 HOH A 162 462 188 HOH HOH . F 4 HOH A 163 463 111 HOH HOH . F 4 HOH A 164 464 181 HOH HOH . F 4 HOH A 165 465 124 HOH HOH . F 4 HOH A 166 466 97 HOH HOH . F 4 HOH A 167 467 168 HOH HOH . F 4 HOH A 168 468 184 HOH HOH . F 4 HOH A 169 469 82 HOH HOH . F 4 HOH A 170 470 146 HOH HOH . F 4 HOH A 171 471 126 HOH HOH . F 4 HOH A 172 472 105 HOH HOH . F 4 HOH A 173 473 182 HOH HOH . F 4 HOH A 174 474 129 HOH HOH . F 4 HOH A 175 475 55 HOH HOH . F 4 HOH A 176 476 176 HOH HOH . F 4 HOH A 177 477 48 HOH HOH . F 4 HOH A 178 478 145 HOH HOH . F 4 HOH A 179 479 143 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . B 2 -2.324 24.161 0.507 1 24.38 ? C1 PLM 201 A 1 HETATM 2 O O1 PLM . . . B 2 -2.929 23.1 0.177 1 22.69 ? O1 PLM 201 A 1 HETATM 3 O O2 PLM . . . B 2 -2.667 25.002 1.388 1 23.47 ? O2 PLM 201 A 1 HETATM 4 C C2 PLM . . . B 2 -0.989 24.49 -0.352 1 20.98 ? C2 PLM 201 A 1 HETATM 5 C C3 PLM . . . B 2 -1.264 25.242 -1.685 1 22.54 ? C3 PLM 201 A 1 HETATM 6 C C4 PLM . . . B 2 -0.088 25.31 -2.653 1 28.91 ? C4 PLM 201 A 1 HETATM 7 C C5 PLM . . . B 2 -0.452 26.046 -3.965 1 20.15 ? C5 PLM 201 A 1 HETATM 8 C C6 PLM . . . B 2 0.684 26.252 -4.966 1 22.74 ? C6 PLM 201 A 1 HETATM 9 C C7 PLM . . . B 2 0.665 27.618 -5.652 1 22.79 ? C7 PLM 201 A 1 HETATM 10 C C8 PLM . . . B 2 -0.558 27.949 -6.404 1 27.36 ? C8 PLM 201 A 1 HETATM 11 C C9 PLM . . . B 2 -0.551 29.344 -6.973 1 21.39 ? C9 PLM 201 A 1 HETATM 12 C CA PLM . . . B 2 -1.69 29.62 -7.972 1 14.61 ? CA PLM 201 A 1 HETATM 13 C CB PLM . . . B 2 -2.952 30.284 -7.327 1 30.24 ? CB PLM 201 A 1 HETATM 14 C CC PLM . . . B 2 -4.113 29.319 -7.058 1 43.6 ? CC PLM 201 A 1 HETATM 15 C CD PLM . . . B 2 -4.922 29.667 -5.796 1 30.95 ? CD PLM 201 A 1 HETATM 16 C CE PLM . . . B 2 -6.048 28.707 -5.473 1 46.97 ? CE PLM 201 A 1 HETATM 17 C CF PLM . . . B 2 -5.616 27.278 -5.193 1 27.07 ? CF PLM 201 A 1 HETATM 18 C CG PLM . . . B 2 -4.63 27.199 -4.06 1 26.54 ? CG PLM 201 A 1 HETATM 19 H H21 PLM . . . B 2 -0.309 25.067 0.292 1 25.17 ? H21 PLM 201 A 1 HETATM 20 H H22 PLM . . . B 2 -0.481 23.533 -0.549 1 25.17 ? H22 PLM 201 A 1 HETATM 21 H H31 PLM . . . B 2 -2.12 24.767 -2.182 1 27.05 ? H31 PLM 201 A 1 HETATM 22 H H32 PLM . . . B 2 -1.603 26.261 -1.449 1 27.05 ? H32 PLM 201 A 1 HETATM 23 H H41 PLM . . . B 2 0.763 25.82 -2.174 1 34.69 ? H41 PLM 201 A 1 HETATM 24 H H42 PLM . . . B 2 0.257 24.291 -2.891 1 34.69 ? H42 PLM 201 A 1 HETATM 25 H H51 PLM . . . B 2 -1.264 25.493 -4.463 1 24.17 ? H51 PLM 201 A 1 HETATM 26 H H52 PLM . . . B 2 -0.88 27.028 -3.711 1 24.17 ? H52 PLM 201 A 1 HETATM 27 H H61 PLM . . . B 2 0.642 25.463 -5.732 1 27.28 ? H61 PLM 201 A 1 HETATM 28 H H62 PLM . . . B 2 1.648 26.122 -4.449 1 27.28 ? H62 PLM 201 A 1 HETATM 29 H H71 PLM . . . B 2 1.526 27.681 -6.335 1 27.34 ? H71 PLM 201 A 1 HETATM 30 H H72 PLM . . . B 2 0.836 28.397 -4.893 1 27.34 ? H72 PLM 201 A 1 HETATM 31 H H81 PLM . . . B 2 -0.691 27.224 -7.221 1 32.83 ? H81 PLM 201 A 1 HETATM 32 H H82 PLM . . . B 2 -1.432 27.832 -5.745 1 32.83 ? H82 PLM 201 A 1 HETATM 33 H H91 PLM . . . B 2 0.415 29.524 -7.469 1 25.67 ? H91 PLM 201 A 1 HETATM 34 H H92 PLM . . . B 2 -0.608 30.07 -6.149 1 25.67 ? H92 PLM 201 A 1 HETATM 35 H HA1 PLM . . . B 2 -1.314 30.267 -8.779 1 17.53 ? HA1 PLM 201 A 1 HETATM 36 H HA2 PLM . . . B 2 -1.985 28.676 -8.452 1 17.53 ? HA2 PLM 201 A 1 HETATM 37 H HB1 PLM . . . B 2 -2.66 30.765 -6.382 1 36.29 ? HB1 PLM 201 A 1 HETATM 38 H HB2 PLM . . . B 2 -3.304 31.096 -7.981 1 36.29 ? HB2 PLM 201 A 1 HETATM 39 H HC1 PLM . . . B 2 -4.786 29.308 -7.928 1 52.32 ? HC1 PLM 201 A 1 HETATM 40 H HC2 PLM . . . B 2 -3.719 28.296 -6.964 1 52.32 ? HC2 PLM 201 A 1 HETATM 41 H HD1 PLM . . . B 2 -5.338 30.681 -5.908 1 37.14 ? HD1 PLM 201 A 1 HETATM 42 H HD2 PLM . . . B 2 -4.238 29.718 -4.936 1 37.14 ? HD2 PLM 201 A 1 HETATM 43 H HE1 PLM . . . B 2 -6.604 29.088 -4.603 1 56.36 ? HE1 PLM 201 A 1 HETATM 44 H HE2 PLM . . . B 2 -6.765 28.704 -6.308 1 56.36 ? HE2 PLM 201 A 1 HETATM 45 H HF1 PLM . . . B 2 -5.172 26.845 -6.101 1 32.49 ? HF1 PLM 201 A 1 HETATM 46 H HF2 PLM . . . B 2 -6.501 26.668 -4.957 1 32.49 ? HF2 PLM 201 A 1 HETATM 47 H HG1 PLM . . . B 2 -4.324 26.164 -3.865 1 31.85 ? HG1 PLM 201 A 1 HETATM 48 H HG2 PLM . . . B 2 -3.723 27.776 -4.282 1 31.85 ? HG2 PLM 201 A 1 HETATM 49 H HG3 PLM . . . B 2 -5.058 27.6 -3.132 1 31.85 ? HG3 PLM 201 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 49 #