data_6XX2 # _model_server_result.job_id 11sCbnZZtuveVN5oa_GMIg _model_server_result.datetime_utc '2025-04-03 13:56:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xx2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6XX2 # _exptl.entry_id 6XX2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6XX2 _cell.length_a 35.606 _cell.length_b 35.606 _cell.length_c 81.228 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XX2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 1 7 ZB1 ZB0 C1 O1 . O4 HO4 . sing 2 ? 2 2 1 GLC ZB1 C1 O1 . O4 HO4 . sing 3 ? 2 3 2 GLC GLC C1 O1 . O4 HO4 . sing 4 ? 2 4 3 ZB2 GLC C1 O1 . O4 HO4 . sing 5 ? 2 5 4 ZB3 ZB2 C1 O1 . O4 HO4 . sing 6 ? 2 6 5 ZB2 ZB3 C1 O1 . O4 HO4 . sing 7 ? 2 7 6 ZB0 ZB2 C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B ZB1 1 B 1 ZB1 B 1 QKH 2 n B GLC 2 B 2 GLC B 1 QKH 2 n B GLC 3 B 3 GLC B 1 QKH 2 n B ZB2 4 B 4 ZB2 B 1 QKH 2 n B ZB3 5 B 5 ZB3 B 1 QKH 2 n B ZB2 6 B 6 ZB2 B 1 QKH 2 n B ZB0 7 B 7 ZB0 B 1 QKH # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O4 ZB1 . B ZB1 1 1_555 B C1 GLC . B GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 sing covale ? covale2 B C1 ZB1 . B ZB1 1 1_555 B O4 ZB0 . B ZB0 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 sing covale ? covale3 B O4 GLC . B GLC 2 1_555 B C1 GLC . B GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 sing covale ? covale4 B O4 GLC . B GLC 3 1_555 B C1 ZB2 . B ZB2 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 sing covale ? covale5 B O4 ZB2 . B ZB2 4 1_555 B C1 ZB3 . B ZB3 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 sing covale ? covale6 B O4 ZB3 . B ZB3 5 1_555 B C1 ZB2 . B ZB2 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 sing covale ? covale7 B O4 ZB2 . B ZB2 6 1_555 B C1 ZB0 . B ZB0 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 sing metalc ? metalc1 A N SER 2 A SER 82 1_555 C CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc2 A N HIS 3 A HIS 83 1_555 C CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc3 A ND1 HIS 3 A HIS 83 1_555 C CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6XX2 _atom_sites.fract_transf_matrix[1][1] 0.028085 _atom_sites.fract_transf_matrix[1][2] 0.016215 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.03243 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012311 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CU A 1 201 1 CU CU . D 4 HOH A 1 301 10 HOH HOH . D 4 HOH A 2 302 12 HOH HOH . D 4 HOH A 3 303 40 HOH HOH . D 4 HOH A 4 304 41 HOH HOH . D 4 HOH A 5 305 28 HOH HOH . D 4 HOH A 6 306 5 HOH HOH . D 4 HOH A 7 307 9 HOH HOH . D 4 HOH A 8 308 21 HOH HOH . D 4 HOH A 9 309 33 HOH HOH . D 4 HOH A 10 310 3 HOH HOH . D 4 HOH A 11 311 1 HOH HOH . D 4 HOH A 12 312 25 HOH HOH . D 4 HOH A 13 313 11 HOH HOH . D 4 HOH A 14 314 16 HOH HOH . D 4 HOH A 15 315 6 HOH HOH . D 4 HOH A 16 316 2 HOH HOH . D 4 HOH A 17 317 19 HOH HOH . D 4 HOH A 18 318 13 HOH HOH . D 4 HOH A 19 319 7 HOH HOH . D 4 HOH A 20 320 30 HOH HOH . D 4 HOH A 21 321 29 HOH HOH . D 4 HOH A 22 322 15 HOH HOH . D 4 HOH A 23 323 37 HOH HOH . D 4 HOH A 24 324 39 HOH HOH . D 4 HOH A 25 325 26 HOH HOH . D 4 HOH A 26 326 36 HOH HOH . D 4 HOH A 27 327 34 HOH HOH . D 4 HOH A 28 328 35 HOH HOH . D 4 HOH A 29 329 14 HOH HOH . D 4 HOH A 30 330 17 HOH HOH . D 4 HOH A 31 331 4 HOH HOH . D 4 HOH A 32 332 32 HOH HOH . D 4 HOH A 33 333 8 HOH HOH . D 4 HOH A 34 334 24 HOH HOH . D 4 HOH A 35 335 27 HOH HOH . D 4 HOH A 36 336 23 HOH HOH . D 4 HOH A 37 337 18 HOH HOH . D 4 HOH A 38 338 31 HOH HOH . D 4 HOH A 39 339 22 HOH HOH . D 4 HOH A 40 340 38 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 23.493 _atom_site.Cartn_y 22.076 _atom_site.Cartn_z 6.674 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 65.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #