data_6XX7 # _model_server_result.job_id OEmuwMiKoTNFWK8PKKDwDw _model_server_result.datetime_utc '2024-10-13 13:12:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xx7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":407}' # _entry.id 6XX7 # _exptl.entry_id 6XX7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XX7 _cell.length_a 60.56 _cell.length_b 60.56 _cell.length_c 228.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XX7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 157 A ASN 156 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc2 B O3G ANP . A ANP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc3 B O1A ANP . A ANP 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 287 n n C1 C2 PGE sing 288 n n C1 H1 PGE sing 289 n n C1 H12 PGE sing 290 n n O1 HO1 PGE sing 291 n n C2 O2 PGE sing 292 n n C2 H2 PGE sing 293 n n C2 H22 PGE sing 294 n n O2 C3 PGE sing 295 n n C3 C4 PGE sing 296 n n C3 H3 PGE sing 297 n n C3 H32 PGE sing 298 n n C4 O3 PGE sing 299 n n C4 H4 PGE sing 300 n n C4 H42 PGE sing 301 n n O4 C6 PGE sing 302 n n O4 HO4 PGE sing 303 n n C6 C5 PGE sing 304 n n C6 H6 PGE sing 305 n n C6 H62 PGE sing 306 n n C5 O3 PGE sing 307 n n C5 H5 PGE sing 308 n n C5 H52 PGE sing 309 n n # _atom_sites.entry_id 6XX7 _atom_sites.fract_transf_matrix[1][1] 0.016513 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016513 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004374 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP A 1 401 1 ANP ANP . C 3 MG A 1 402 2 MG MG . D 4 SO4 A 1 403 3 SO4 SO4 . E 5 CL A 1 404 4 CL CL . F 5 CL A 1 405 5 CL CL . G 5 CL A 1 406 6 CL CL . H 6 PGE A 1 407 7 PGE PGE . I 7 HOH A 1 501 23 HOH HOH . I 7 HOH A 2 502 65 HOH HOH . I 7 HOH A 3 503 35 HOH HOH . I 7 HOH A 4 504 11 HOH HOH . I 7 HOH A 5 505 51 HOH HOH . I 7 HOH A 6 506 52 HOH HOH . I 7 HOH A 7 507 12 HOH HOH . I 7 HOH A 8 508 9 HOH HOH . I 7 HOH A 9 509 28 HOH HOH . I 7 HOH A 10 510 36 HOH HOH . I 7 HOH A 11 511 60 HOH HOH . I 7 HOH A 12 512 17 HOH HOH . I 7 HOH A 13 513 13 HOH HOH . I 7 HOH A 14 514 66 HOH HOH . I 7 HOH A 15 515 62 HOH HOH . I 7 HOH A 16 516 19 HOH HOH . I 7 HOH A 17 517 41 HOH HOH . I 7 HOH A 18 518 14 HOH HOH . I 7 HOH A 19 519 25 HOH HOH . I 7 HOH A 20 520 24 HOH HOH . I 7 HOH A 21 521 27 HOH HOH . I 7 HOH A 22 522 31 HOH HOH . I 7 HOH A 23 523 44 HOH HOH . I 7 HOH A 24 524 18 HOH HOH . I 7 HOH A 25 525 48 HOH HOH . I 7 HOH A 26 526 20 HOH HOH . I 7 HOH A 27 527 39 HOH HOH . I 7 HOH A 28 528 40 HOH HOH . I 7 HOH A 29 529 22 HOH HOH . I 7 HOH A 30 530 50 HOH HOH . I 7 HOH A 31 531 33 HOH HOH . I 7 HOH A 32 532 15 HOH HOH . I 7 HOH A 33 533 34 HOH HOH . I 7 HOH A 34 534 61 HOH HOH . I 7 HOH A 35 535 59 HOH HOH . I 7 HOH A 36 536 10 HOH HOH . I 7 HOH A 37 537 16 HOH HOH . I 7 HOH A 38 538 30 HOH HOH . I 7 HOH A 39 539 8 HOH HOH . I 7 HOH A 40 540 49 HOH HOH . I 7 HOH A 41 541 26 HOH HOH . I 7 HOH A 42 542 37 HOH HOH . I 7 HOH A 43 543 21 HOH HOH . I 7 HOH A 44 544 38 HOH HOH . I 7 HOH A 45 545 46 HOH HOH . I 7 HOH A 46 546 43 HOH HOH . I 7 HOH A 47 547 45 HOH HOH . I 7 HOH A 48 548 54 HOH HOH . I 7 HOH A 49 549 67 HOH HOH . I 7 HOH A 50 550 63 HOH HOH . I 7 HOH A 51 551 42 HOH HOH . I 7 HOH A 52 552 53 HOH HOH . I 7 HOH A 53 553 57 HOH HOH . I 7 HOH A 54 554 64 HOH HOH . I 7 HOH A 55 555 56 HOH HOH . I 7 HOH A 56 556 29 HOH HOH . I 7 HOH A 57 557 32 HOH HOH . I 7 HOH A 58 558 58 HOH HOH . I 7 HOH A 59 559 55 HOH HOH . I 7 HOH A 60 560 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . H 6 45.488 12.385 45.453 1 90.69 ? C1 PGE 407 A 1 HETATM 2 O O1 PGE . . . H 6 44.754 11.824 44.377 1 93.05 ? O1 PGE 407 A 1 HETATM 3 C C2 PGE . . . H 6 44.809 11.996 46.756 1 85.45 ? C2 PGE 407 A 1 HETATM 4 O O2 PGE . . . H 6 45.362 10.786 47.229 1 82.84 ? O2 PGE 407 A 1 HETATM 5 C C3 PGE . . . H 6 46.478 10.982 48.076 1 83.48 ? C3 PGE 407 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #