data_6XXR # _model_server_result.job_id vWWE_KIf-IfuSsYl4kooTA _model_server_result.datetime_utc '2024-11-22 06:40:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xxr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":202}' # _entry.id 6XXR # _exptl.entry_id 6XXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 61.038 _cell.angle_beta 84.196 _cell.angle_gamma 84.21 _cell.entry_id 6XXR _cell.length_a 34.74 _cell.length_b 43.19 _cell.length_c 44.01 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,J,L 1 1 B,C,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C ACE 1 F ACE 1 1_555 C N 2L5 2 F 2L5 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale2 C C 2L5 2 F 2L5 2 1_555 C N PRO 3 F PRO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.389 ? covale ? covale3 C C PRO 6 F PRO 6 1_555 C N 2TL 7 F 2TL 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale4 D C ACE 1 G ACE 1 1_555 D N 2L5 2 G 2L5 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale5 D C 2L5 2 G 2L5 2 1_555 D N PRO 3 G PRO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale6 D C PRO 6 G PRO 6 1_555 D N 2TL 7 G 2TL 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 282 n n N O2 NO3 sing 283 n n N O3 NO3 sing 284 n n # _atom_sites.entry_id 6XXR _atom_sites.fract_transf_matrix[1][1] 0.028785 _atom_sites.fract_transf_matrix[1][2] -0.002919 _atom_sites.fract_transf_matrix[1][3] -0.001741 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023272 _atom_sites.fract_transf_matrix[2][3] -0.012696 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026017 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NO3 A 1 201 1 NO3 NO3 . F 3 NO3 A 1 202 4 NO3 NO3 . G 3 NO3 A 1 203 5 NO3 NO3 . H 3 NO3 B 1 201 2 NO3 NO3 . I 3 NO3 B 1 202 3 NO3 NO3 . J 4 HOH A 1 301 11 HOH HOH . J 4 HOH A 2 302 55 HOH HOH . J 4 HOH A 3 303 40 HOH HOH . J 4 HOH A 4 304 48 HOH HOH . J 4 HOH A 5 305 41 HOH HOH . J 4 HOH A 6 306 16 HOH HOH . J 4 HOH A 7 307 32 HOH HOH . J 4 HOH A 8 308 29 HOH HOH . J 4 HOH A 9 309 13 HOH HOH . J 4 HOH A 10 310 15 HOH HOH . J 4 HOH A 11 311 12 HOH HOH . J 4 HOH A 12 312 14 HOH HOH . J 4 HOH A 13 313 9 HOH HOH . J 4 HOH A 14 314 18 HOH HOH . J 4 HOH A 15 315 54 HOH HOH . J 4 HOH A 16 316 10 HOH HOH . J 4 HOH A 17 317 19 HOH HOH . J 4 HOH A 18 318 6 HOH HOH . J 4 HOH A 19 319 24 HOH HOH . J 4 HOH A 20 320 5 HOH HOH . J 4 HOH A 21 321 45 HOH HOH . J 4 HOH A 22 322 37 HOH HOH . J 4 HOH A 23 323 36 HOH HOH . J 4 HOH A 24 324 44 HOH HOH . J 4 HOH A 25 325 35 HOH HOH . K 4 HOH B 1 301 23 HOH HOH . K 4 HOH B 2 302 30 HOH HOH . K 4 HOH B 3 303 51 HOH HOH . K 4 HOH B 4 304 50 HOH HOH . K 4 HOH B 5 305 2 HOH HOH . K 4 HOH B 6 306 31 HOH HOH . K 4 HOH B 7 307 47 HOH HOH . K 4 HOH B 8 308 49 HOH HOH . K 4 HOH B 9 309 7 HOH HOH . K 4 HOH B 10 310 28 HOH HOH . K 4 HOH B 11 311 53 HOH HOH . K 4 HOH B 12 312 25 HOH HOH . K 4 HOH B 13 313 8 HOH HOH . K 4 HOH B 14 314 22 HOH HOH . K 4 HOH B 15 315 21 HOH HOH . K 4 HOH B 16 316 58 HOH HOH . K 4 HOH B 17 317 26 HOH HOH . K 4 HOH B 18 318 39 HOH HOH . K 4 HOH B 19 319 42 HOH HOH . K 4 HOH B 20 320 57 HOH HOH . K 4 HOH B 21 321 52 HOH HOH . K 4 HOH B 22 322 17 HOH HOH . K 4 HOH B 23 323 43 HOH HOH . K 4 HOH B 24 324 38 HOH HOH . K 4 HOH B 25 325 46 HOH HOH . L 4 HOH G 1 101 56 HOH HOH . L 4 HOH G 2 102 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . A . I 3 39.482 -8.839 12.943 0.67 18.7 ? N NO3 202 B 1 HETATM 2 N N NO3 . B . I 3 39.5 -9.163 13.008 0.33 18.79 ? N NO3 202 B 1 HETATM 3 O O1 NO3 . A . I 3 38.352 -9.081 12.495 0.67 19.16 ? O1 NO3 202 B 1 HETATM 4 O O1 NO3 . B . I 3 39.169 -9.748 11.945 0.33 18.72 ? O1 NO3 202 B 1 HETATM 5 O O2 NO3 . A . I 3 39.729 -9.038 14.164 0.67 18.76 ? O2 NO3 202 B 1 HETATM 6 O O2 NO3 . B . I 3 40.36 -9.674 13.781 0.33 19.12 ? O2 NO3 202 B 1 HETATM 7 O O3 NO3 . A . I 3 40.369 -8.381 12.181 0.67 18.32 ? O3 NO3 202 B 1 HETATM 8 O O3 NO3 . B . I 3 38.974 -8.061 13.297 0.33 19.06 ? O3 NO3 202 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #