data_6XYK # _model_server_result.job_id OYR7ASLY49l5j-SxlSPkqA _model_server_result.datetime_utc '2024-12-03 22:12:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xyk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6XYK # _exptl.entry_id 6XYK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XYK _cell.length_a 54.83 _cell.length_b 58.58 _cell.length_c 67.41 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XYK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 25 A CYS 40 1_555 A SG CYS 41 A CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 109 A CYS 124 1_555 A SG CYS 210 A CYS 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf4 A SG CYS 116 A CYS 131 1_555 A SG CYS 183 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf5 A SG CYS 148 A CYS 163 1_555 A SG CYS 162 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 A SG CYS 173 A CYS 188 1_555 A SG CYS 197 A CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc1 A OE1 GLU 52 A GLU 67 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc2 A O ASN 54 A ASN 69 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc3 A O VAL 57 A VAL 72 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc4 A OE2 GLU 62 A GLU 77 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc5 D CA CA . A CA 303 1_555 E O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc6 D CA CA . A CA 303 1_555 E O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 307 n n S O2 SO4 doub 308 n n S O3 SO4 sing 309 n n S O4 SO4 sing 310 n n # _atom_sites.entry_id 6XYK _atom_sites.fract_transf_matrix[1][1] 0.018238 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017071 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014835 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BEN A 1 301 301 BEN BAM . C 3 SO4 A 1 302 401 SO4 SO4 . D 4 CA A 1 303 1 CA CA . E 5 HOH A 1 401 168 HOH HOH . E 5 HOH A 2 402 114 HOH HOH . E 5 HOH A 3 403 154 HOH HOH . E 5 HOH A 4 404 101 HOH HOH . E 5 HOH A 5 405 175 HOH HOH . E 5 HOH A 6 406 173 HOH HOH . E 5 HOH A 7 407 3 HOH HOH . E 5 HOH A 8 408 102 HOH HOH . E 5 HOH A 9 409 70 HOH HOH . E 5 HOH A 10 410 49 HOH HOH . E 5 HOH A 11 411 151 HOH HOH . E 5 HOH A 12 412 81 HOH HOH . E 5 HOH A 13 413 11 HOH HOH . E 5 HOH A 14 414 177 HOH HOH . E 5 HOH A 15 415 85 HOH HOH . E 5 HOH A 16 416 94 HOH HOH . E 5 HOH A 17 417 115 HOH HOH . E 5 HOH A 18 418 56 HOH HOH . E 5 HOH A 19 419 126 HOH HOH . E 5 HOH A 20 420 8 HOH HOH . E 5 HOH A 21 421 83 HOH HOH . E 5 HOH A 22 422 21 HOH HOH . E 5 HOH A 23 423 59 HOH HOH . E 5 HOH A 24 424 156 HOH HOH . E 5 HOH A 25 425 79 HOH HOH . E 5 HOH A 26 426 26 HOH HOH . E 5 HOH A 27 427 130 HOH HOH . E 5 HOH A 28 428 84 HOH HOH . E 5 HOH A 29 429 48 HOH HOH . E 5 HOH A 30 430 51 HOH HOH . E 5 HOH A 31 431 30 HOH HOH . E 5 HOH A 32 432 46 HOH HOH . E 5 HOH A 33 433 219 HOH HOH . E 5 HOH A 34 434 117 HOH HOH . E 5 HOH A 35 435 44 HOH HOH . E 5 HOH A 36 436 55 HOH HOH . E 5 HOH A 37 437 212 HOH HOH . E 5 HOH A 38 438 109 HOH HOH . E 5 HOH A 39 439 146 HOH HOH . E 5 HOH A 40 440 1 HOH HOH . E 5 HOH A 41 441 42 HOH HOH . E 5 HOH A 42 442 147 HOH HOH . E 5 HOH A 43 443 169 HOH HOH . E 5 HOH A 44 444 75 HOH HOH . E 5 HOH A 45 445 99 HOH HOH . E 5 HOH A 46 446 124 HOH HOH . E 5 HOH A 47 447 108 HOH HOH . E 5 HOH A 48 448 180 HOH HOH . E 5 HOH A 49 449 2 HOH HOH . E 5 HOH A 50 450 128 HOH HOH . E 5 HOH A 51 451 140 HOH HOH . E 5 HOH A 52 452 174 HOH HOH . E 5 HOH A 53 453 7 HOH HOH . E 5 HOH A 54 454 144 HOH HOH . E 5 HOH A 55 455 53 HOH HOH . E 5 HOH A 56 456 16 HOH HOH . E 5 HOH A 57 457 209 HOH HOH . E 5 HOH A 58 458 132 HOH HOH . E 5 HOH A 59 459 24 HOH HOH . E 5 HOH A 60 460 98 HOH HOH . E 5 HOH A 61 461 10 HOH HOH . E 5 HOH A 62 462 17 HOH HOH . E 5 HOH A 63 463 86 HOH HOH . E 5 HOH A 64 464 47 HOH HOH . E 5 HOH A 65 465 63 HOH HOH . E 5 HOH A 66 466 4 HOH HOH . E 5 HOH A 67 467 77 HOH HOH . E 5 HOH A 68 468 153 HOH HOH . E 5 HOH A 69 469 161 HOH HOH . E 5 HOH A 70 470 35 HOH HOH . E 5 HOH A 71 471 72 HOH HOH . E 5 HOH A 72 472 157 HOH HOH . E 5 HOH A 73 473 37 HOH HOH . E 5 HOH A 74 474 170 HOH HOH . E 5 HOH A 75 475 207 HOH HOH . E 5 HOH A 76 476 28 HOH HOH . E 5 HOH A 77 477 189 HOH HOH . E 5 HOH A 78 478 40 HOH HOH . E 5 HOH A 79 479 92 HOH HOH . E 5 HOH A 80 480 23 HOH HOH . E 5 HOH A 81 481 12 HOH HOH . E 5 HOH A 82 482 111 HOH HOH . E 5 HOH A 83 483 206 HOH HOH . E 5 HOH A 84 484 133 HOH HOH . E 5 HOH A 85 485 167 HOH HOH . E 5 HOH A 86 486 67 HOH HOH . E 5 HOH A 87 487 5 HOH HOH . E 5 HOH A 88 488 164 HOH HOH . E 5 HOH A 89 489 131 HOH HOH . E 5 HOH A 90 490 62 HOH HOH . E 5 HOH A 91 491 215 HOH HOH . E 5 HOH A 92 492 69 HOH HOH . E 5 HOH A 93 493 142 HOH HOH . E 5 HOH A 94 494 45 HOH HOH . E 5 HOH A 95 495 152 HOH HOH . E 5 HOH A 96 496 138 HOH HOH . E 5 HOH A 97 497 33 HOH HOH . E 5 HOH A 98 498 6 HOH HOH . E 5 HOH A 99 499 19 HOH HOH . E 5 HOH A 100 500 135 HOH HOH . E 5 HOH A 101 501 80 HOH HOH . E 5 HOH A 102 502 123 HOH HOH . E 5 HOH A 103 503 192 HOH HOH . E 5 HOH A 104 504 210 HOH HOH . E 5 HOH A 105 505 82 HOH HOH . E 5 HOH A 106 506 112 HOH HOH . E 5 HOH A 107 507 104 HOH HOH . E 5 HOH A 108 508 58 HOH HOH . E 5 HOH A 109 509 204 HOH HOH . E 5 HOH A 110 510 50 HOH HOH . E 5 HOH A 111 511 9 HOH HOH . E 5 HOH A 112 512 14 HOH HOH . E 5 HOH A 113 513 65 HOH HOH . E 5 HOH A 114 514 116 HOH HOH . E 5 HOH A 115 515 110 HOH HOH . E 5 HOH A 116 516 57 HOH HOH . E 5 HOH A 117 517 184 HOH HOH . E 5 HOH A 118 518 18 HOH HOH . E 5 HOH A 119 519 76 HOH HOH . E 5 HOH A 120 520 39 HOH HOH . E 5 HOH A 121 521 13 HOH HOH . E 5 HOH A 122 522 41 HOH HOH . E 5 HOH A 123 523 54 HOH HOH . E 5 HOH A 124 524 139 HOH HOH . E 5 HOH A 125 525 127 HOH HOH . E 5 HOH A 126 526 61 HOH HOH . E 5 HOH A 127 527 43 HOH HOH . E 5 HOH A 128 528 129 HOH HOH . E 5 HOH A 129 529 91 HOH HOH . E 5 HOH A 130 530 36 HOH HOH . E 5 HOH A 131 531 220 HOH HOH . E 5 HOH A 132 532 121 HOH HOH . E 5 HOH A 133 533 214 HOH HOH . E 5 HOH A 134 534 25 HOH HOH . E 5 HOH A 135 535 27 HOH HOH . E 5 HOH A 136 536 186 HOH HOH . E 5 HOH A 137 537 213 HOH HOH . E 5 HOH A 138 538 216 HOH HOH . E 5 HOH A 139 539 71 HOH HOH . E 5 HOH A 140 540 149 HOH HOH . E 5 HOH A 141 541 87 HOH HOH . E 5 HOH A 142 542 158 HOH HOH . E 5 HOH A 143 543 201 HOH HOH . E 5 HOH A 144 544 29 HOH HOH . E 5 HOH A 145 545 32 HOH HOH . E 5 HOH A 146 546 113 HOH HOH . E 5 HOH A 147 547 119 HOH HOH . E 5 HOH A 148 548 125 HOH HOH . E 5 HOH A 149 549 100 HOH HOH . E 5 HOH A 150 550 181 HOH HOH . E 5 HOH A 151 551 120 HOH HOH . E 5 HOH A 152 552 205 HOH HOH . E 5 HOH A 153 553 78 HOH HOH . E 5 HOH A 154 554 200 HOH HOH . E 5 HOH A 155 555 122 HOH HOH . E 5 HOH A 156 556 95 HOH HOH . E 5 HOH A 157 557 178 HOH HOH . E 5 HOH A 158 558 196 HOH HOH . E 5 HOH A 159 559 89 HOH HOH . E 5 HOH A 160 560 134 HOH HOH . E 5 HOH A 161 561 159 HOH HOH . E 5 HOH A 162 562 97 HOH HOH . E 5 HOH A 163 563 60 HOH HOH . E 5 HOH A 164 564 15 HOH HOH . E 5 HOH A 165 565 222 HOH HOH . E 5 HOH A 166 566 90 HOH HOH . E 5 HOH A 167 567 176 HOH HOH . E 5 HOH A 168 568 162 HOH HOH . E 5 HOH A 169 569 106 HOH HOH . E 5 HOH A 170 570 150 HOH HOH . E 5 HOH A 171 571 96 HOH HOH . E 5 HOH A 172 572 31 HOH HOH . E 5 HOH A 173 573 64 HOH HOH . E 5 HOH A 174 574 218 HOH HOH . E 5 HOH A 175 575 208 HOH HOH . E 5 HOH A 176 576 38 HOH HOH . E 5 HOH A 177 577 197 HOH HOH . E 5 HOH A 178 578 93 HOH HOH . E 5 HOH A 179 579 105 HOH HOH . E 5 HOH A 180 580 203 HOH HOH . E 5 HOH A 181 581 172 HOH HOH . E 5 HOH A 182 582 166 HOH HOH . E 5 HOH A 183 583 155 HOH HOH . E 5 HOH A 184 584 74 HOH HOH . E 5 HOH A 185 585 165 HOH HOH . E 5 HOH A 186 586 187 HOH HOH . E 5 HOH A 187 587 145 HOH HOH . E 5 HOH A 188 588 193 HOH HOH . E 5 HOH A 189 589 66 HOH HOH . E 5 HOH A 190 590 185 HOH HOH . E 5 HOH A 191 591 195 HOH HOH . E 5 HOH A 192 592 88 HOH HOH . E 5 HOH A 193 593 188 HOH HOH . E 5 HOH A 194 594 194 HOH HOH . E 5 HOH A 195 595 191 HOH HOH . E 5 HOH A 196 596 217 HOH HOH . E 5 HOH A 197 597 160 HOH HOH . E 5 HOH A 198 598 68 HOH HOH . E 5 HOH A 199 599 182 HOH HOH . E 5 HOH A 200 600 183 HOH HOH . E 5 HOH A 201 601 202 HOH HOH . E 5 HOH A 202 602 221 HOH HOH . E 5 HOH A 203 603 118 HOH HOH . E 5 HOH A 204 604 211 HOH HOH . E 5 HOH A 205 605 137 HOH HOH . E 5 HOH A 206 606 73 HOH HOH . E 5 HOH A 207 607 107 HOH HOH . E 5 HOH A 208 608 198 HOH HOH . E 5 HOH A 209 609 190 HOH HOH . E 5 HOH A 210 610 163 HOH HOH . E 5 HOH A 211 611 148 HOH HOH . E 5 HOH A 212 612 179 HOH HOH . E 5 HOH A 213 613 136 HOH HOH . E 5 HOH A 214 614 171 HOH HOH . E 5 HOH A 215 615 199 HOH HOH . E 5 HOH A 216 616 141 HOH HOH . E 5 HOH A 217 617 52 HOH HOH . E 5 HOH A 218 618 143 HOH HOH . E 5 HOH A 219 619 103 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 -1.033 -11.552 -10.879 1 26.47 ? S SO4 302 A 1 HETATM 2 O O1 SO4 . . . C 3 -0.174 -11.391 -12.056 1 32.93 ? O1 SO4 302 A 1 HETATM 3 O O2 SO4 . . . C 3 -1.813 -12.782 -10.992 1 24.3 ? O2 SO4 302 A 1 HETATM 4 O O3 SO4 . . . C 3 -1.916 -10.395 -10.758 1 38.78 ? O3 SO4 302 A 1 HETATM 5 O O4 SO4 . . . C 3 -0.165 -11.658 -9.703 1 29.88 ? O4 SO4 302 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 691 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 5 #