data_6XYS
#
_model_server_result.job_id            iYOWS5sPpS1Mt_LtxdCnPA 
_model_server_result.datetime_utc      '2025-02-17 23:17:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xys 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":602}' 
#
_entry.id    6XYS 
#
_exptl.entry_id    6XYS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              59.044 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6XYS 
_cell.length_a            94.62 
_cell.length_b            94.62 
_cell.length_c            159.01 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XYS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    'P 4nw 2abw' 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E 1 1 
A,C,D,E 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 94.62 94.62 79.505 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
2 ? 2 3 2 MAN NAG C1 O1 . O4 HO4 . sing 
3 ? 2 4 3 BMA MAN C1 O1 . O3 HO3 . sing 
4 ? 2 5 4 MAN BMA C1 O1 . O3 HO3 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B NAG 1 B 1 NAG A 991 NAG 
2 n B NAG 2 B 2 NAG A 992 NAG 
2 n B MAN 3 B 3 MAN A 993 BMA 
2 n B BMA 4 B 4 BMA A 994 BMA 
2 n B MAN 5 B 5 MAN A 995 BMA 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 93 A CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
disulf ? disulf2 A SG CYS 292 A CYS 292 1_555 A SG CYS 307 A CYS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf3 A SG CYS 442 A CYS 442 1_555 A SG CYS 560 A CYS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
covale ? covale1 A OG SER 238 A SER 238 1_555 D C ACT . A ACT 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale2 A ND2 ASN 493 A ASN 493 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? 
covale ? covale3 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.371 ? 
covale ? covale4 B O4 NAG . B NAG 2 1_555 B C1 MAN . B MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? 
covale ? covale5 B O3 MAN . B MAN 3 1_555 B C1 BMA . B BMA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? 
covale ? covale6 B O3 BMA . B BMA 4 1_555 B C1 MAN . B MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.376 ? 
#
_chem_comp.formula           'C2 H3 O2 -1' 
_chem_comp.formula_weight    59.044 
_chem_comp.id                ACT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACT doub 1 n n 
C OXT ACT sing 2 n n 
C CH3 ACT sing 3 n n 
CH3 H1 ACT sing 4 n n 
CH3 H2 ACT sing 5 n n 
CH3 H3 ACT sing 6 n n 
#
_atom_sites.entry_id                     6XYS 
_atom_sites.fract_transf_matrix[1][1]    0.010569 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010569 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006289 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CL A 1 601 1000 CL CL . 
D 4 ACT A 1 602 1101 ACT ACT . 
E 5 HOH A 1 701 85 HOH HOH . 
E 5 HOH A 2 702 20 HOH HOH . 
E 5 HOH A 3 703 76 HOH HOH . 
E 5 HOH A 4 704 86 HOH HOH . 
E 5 HOH A 5 705 51 HOH HOH . 
E 5 HOH A 6 706 57 HOH HOH . 
E 5 HOH A 7 707 65 HOH HOH . 
E 5 HOH A 8 708 79 HOH HOH . 
E 5 HOH A 9 709 25 HOH HOH . 
E 5 HOH A 10 710 13 HOH HOH . 
E 5 HOH A 11 711 47 HOH HOH . 
E 5 HOH A 12 712 69 HOH HOH . 
E 5 HOH A 13 713 7 HOH HOH . 
E 5 HOH A 14 714 50 HOH HOH . 
E 5 HOH A 15 715 61 HOH HOH . 
E 5 HOH A 16 716 48 HOH HOH . 
E 5 HOH A 17 717 8 HOH HOH . 
E 5 HOH A 18 718 3 HOH HOH . 
E 5 HOH A 19 719 60 HOH HOH . 
E 5 HOH A 20 720 56 HOH HOH . 
E 5 HOH A 21 721 19 HOH HOH . 
E 5 HOH A 22 722 26 HOH HOH . 
E 5 HOH A 23 723 62 HOH HOH . 
E 5 HOH A 24 724 28 HOH HOH . 
E 5 HOH A 25 725 27 HOH HOH . 
E 5 HOH A 26 726 37 HOH HOH . 
E 5 HOH A 27 727 39 HOH HOH . 
E 5 HOH A 28 728 22 HOH HOH . 
E 5 HOH A 29 729 93 HOH HOH . 
E 5 HOH A 30 730 34 HOH HOH . 
E 5 HOH A 31 731 75 HOH HOH . 
E 5 HOH A 32 732 54 HOH HOH . 
E 5 HOH A 33 733 53 HOH HOH . 
E 5 HOH A 34 734 33 HOH HOH . 
E 5 HOH A 35 735 52 HOH HOH . 
E 5 HOH A 36 736 64 HOH HOH . 
E 5 HOH A 37 737 4 HOH HOH . 
E 5 HOH A 38 738 5 HOH HOH . 
E 5 HOH A 39 739 49 HOH HOH . 
E 5 HOH A 40 740 14 HOH HOH . 
E 5 HOH A 41 741 1 HOH HOH . 
E 5 HOH A 42 742 80 HOH HOH . 
E 5 HOH A 43 743 70 HOH HOH . 
E 5 HOH A 44 744 90 HOH HOH . 
E 5 HOH A 45 745 88 HOH HOH . 
E 5 HOH A 46 746 58 HOH HOH . 
E 5 HOH A 47 747 92 HOH HOH . 
E 5 HOH A 48 748 2 HOH HOH . 
E 5 HOH A 49 749 89 HOH HOH . 
E 5 HOH A 50 750 32 HOH HOH . 
E 5 HOH A 51 751 31 HOH HOH . 
E 5 HOH A 52 752 71 HOH HOH . 
E 5 HOH A 53 753 17 HOH HOH . 
E 5 HOH A 54 754 67 HOH HOH . 
E 5 HOH A 55 755 68 HOH HOH . 
E 5 HOH A 56 756 16 HOH HOH . 
E 5 HOH A 57 757 72 HOH HOH . 
E 5 HOH A 58 758 59 HOH HOH . 
E 5 HOH A 59 759 55 HOH HOH . 
E 5 HOH A 60 760 40 HOH HOH . 
E 5 HOH A 61 761 87 HOH HOH . 
E 5 HOH A 62 762 63 HOH HOH . 
E 5 HOH A 63 763 81 HOH HOH . 
E 5 HOH A 64 764 82 HOH HOH . 
E 5 HOH A 65 765 43 HOH HOH . 
E 5 HOH A 66 766 9 HOH HOH . 
E 5 HOH A 67 767 46 HOH HOH . 
E 5 HOH A 68 768 94 HOH HOH . 
E 5 HOH A 69 769 21 HOH HOH . 
E 5 HOH A 70 770 83 HOH HOH . 
E 5 HOH A 71 771 18 HOH HOH . 
E 5 HOH A 72 772 30 HOH HOH . 
E 5 HOH A 73 773 42 HOH HOH . 
E 5 HOH A 74 774 36 HOH HOH . 
E 5 HOH A 75 775 91 HOH HOH . 
E 5 HOH A 76 776 45 HOH HOH . 
E 5 HOH A 77 777 38 HOH HOH . 
E 5 HOH A 78 778 35 HOH HOH . 
E 5 HOH A 79 779 24 HOH HOH . 
E 5 HOH A 80 780 84 HOH HOH . 
E 5 HOH A 81 781 12 HOH HOH . 
E 5 HOH A 82 782 6 HOH HOH . 
E 5 HOH A 83 783 11 HOH HOH . 
E 5 HOH A 84 784 66 HOH HOH . 
E 5 HOH A 85 785 44 HOH HOH . 
E 5 HOH A 86 786 73 HOH HOH . 
E 5 HOH A 87 787 29 HOH HOH . 
E 5 HOH A 88 788 77 HOH HOH . 
E 5 HOH A 89 789 74 HOH HOH . 
E 5 HOH A 90 790 15 HOH HOH . 
E 5 HOH A 91 791 78 HOH HOH . 
E 5 HOH A 92 792 10 HOH HOH . 
E 5 HOH A 93 793 23 HOH HOH . 
E 5 HOH A 94 794 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACT . . . D 4 26.417 66.225 11.429 1 64.4 ? C ACT 602 A 1 
HETATM 2 O O ACT . . . D 4 25.541 66.744 10.675 1 72.5 ? O ACT 602 A 1 
HETATM 3 C CH3 ACT . . . D 4 27.851 66.868 11.395 1 59.85 ? CH3 ACT 602 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           3 
#