data_6XYY # _model_server_result.job_id HiZBKHaW5-iBmKzo51Q9KA _model_server_result.datetime_utc '2024-11-08 15:37:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xyy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":605}' # _entry.id 6XYY # _exptl.entry_id 6XYY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XYY _cell.length_a 95.81 _cell.length_b 95.81 _cell.length_c 162.03 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XYY _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,C,D,E,F,G,H 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 95.81 95.81 81.015 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 MAN NAG C1 O1 . O4 HO4 . sing 3 ? 2 4 3 MAN MAN C1 O1 . O3 HO3 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG A 601 NAG 2 n B NAG 2 B 2 NAG A 603 NAG 2 n B MAN 3 B 3 MAN A 604 BMA 2 n B MAN 4 B 4 MAN A 606 BMA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 93 A CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf2 A SG CYS 292 A CYS 292 1_555 A SG CYS 307 A CYS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf3 A SG CYS 442 A CYS 442 1_555 A SG CYS 560 A CYS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? covale ? covale1 A ND2 ASN 88 A ASN 88 1_555 E C1 NAG . A NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale2 A ND2 ASN 493 A ASN 493 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale3 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale4 B O4 NAG . B NAG 2 1_555 B C1 MAN . B MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.374 ? covale ? covale5 B O3 MAN . B MAN 3 1_555 B C1 MAN . B MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6XYY _atom_sites.fract_transf_matrix[1][1] 0.010437 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010437 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006172 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PPI A 1 601 700 PPI PPI . D 4 760 A 1 602 701 760 760 . E 5 NAG A 1 603 602 NAG NAG . F 6 SO4 A 1 604 702 SO4 SO4 . G 7 CL A 1 605 703 CL CL . H 8 HOH A 1 701 88 HOH HOH . H 8 HOH A 2 702 109 HOH HOH . H 8 HOH A 3 703 71 HOH HOH . H 8 HOH A 4 704 62 HOH HOH . H 8 HOH A 5 705 96 HOH HOH . H 8 HOH A 6 706 83 HOH HOH . H 8 HOH A 7 707 102 HOH HOH . H 8 HOH A 8 708 38 HOH HOH . H 8 HOH A 9 709 37 HOH HOH . H 8 HOH A 10 710 59 HOH HOH . H 8 HOH A 11 711 4 HOH HOH . H 8 HOH A 12 712 32 HOH HOH . H 8 HOH A 13 713 85 HOH HOH . H 8 HOH A 14 714 23 HOH HOH . H 8 HOH A 15 715 35 HOH HOH . H 8 HOH A 16 716 40 HOH HOH . H 8 HOH A 17 717 25 HOH HOH . H 8 HOH A 18 718 118 HOH HOH . H 8 HOH A 19 719 7 HOH HOH . H 8 HOH A 20 720 110 HOH HOH . H 8 HOH A 21 721 8 HOH HOH . H 8 HOH A 22 722 70 HOH HOH . H 8 HOH A 23 723 136 HOH HOH . H 8 HOH A 24 724 50 HOH HOH . H 8 HOH A 25 725 22 HOH HOH . H 8 HOH A 26 726 51 HOH HOH . H 8 HOH A 27 727 122 HOH HOH . H 8 HOH A 28 728 100 HOH HOH . H 8 HOH A 29 729 6 HOH HOH . H 8 HOH A 30 730 29 HOH HOH . H 8 HOH A 31 731 87 HOH HOH . H 8 HOH A 32 732 21 HOH HOH . H 8 HOH A 33 733 46 HOH HOH . H 8 HOH A 34 734 54 HOH HOH . H 8 HOH A 35 735 82 HOH HOH . H 8 HOH A 36 736 26 HOH HOH . H 8 HOH A 37 737 20 HOH HOH . H 8 HOH A 38 738 44 HOH HOH . H 8 HOH A 39 739 49 HOH HOH . H 8 HOH A 40 740 92 HOH HOH . H 8 HOH A 41 741 143 HOH HOH . H 8 HOH A 42 742 123 HOH HOH . H 8 HOH A 43 743 74 HOH HOH . H 8 HOH A 44 744 64 HOH HOH . H 8 HOH A 45 745 34 HOH HOH . H 8 HOH A 46 746 41 HOH HOH . H 8 HOH A 47 747 117 HOH HOH . H 8 HOH A 48 748 28 HOH HOH . H 8 HOH A 49 749 98 HOH HOH . H 8 HOH A 50 750 140 HOH HOH . H 8 HOH A 51 751 5 HOH HOH . H 8 HOH A 52 752 137 HOH HOH . H 8 HOH A 53 753 124 HOH HOH . H 8 HOH A 54 754 79 HOH HOH . H 8 HOH A 55 755 24 HOH HOH . H 8 HOH A 56 756 141 HOH HOH . H 8 HOH A 57 757 60 HOH HOH . H 8 HOH A 58 758 75 HOH HOH . H 8 HOH A 59 759 144 HOH HOH . H 8 HOH A 60 760 12 HOH HOH . H 8 HOH A 61 761 63 HOH HOH . H 8 HOH A 62 762 94 HOH HOH . H 8 HOH A 63 763 107 HOH HOH . H 8 HOH A 64 764 16 HOH HOH . H 8 HOH A 65 765 116 HOH HOH . H 8 HOH A 66 766 138 HOH HOH . H 8 HOH A 67 767 139 HOH HOH . H 8 HOH A 68 768 13 HOH HOH . H 8 HOH A 69 769 112 HOH HOH . H 8 HOH A 70 770 91 HOH HOH . H 8 HOH A 71 771 31 HOH HOH . H 8 HOH A 72 772 19 HOH HOH . H 8 HOH A 73 773 55 HOH HOH . H 8 HOH A 74 774 95 HOH HOH . H 8 HOH A 75 775 133 HOH HOH . H 8 HOH A 76 776 135 HOH HOH . H 8 HOH A 77 777 30 HOH HOH . H 8 HOH A 78 778 11 HOH HOH . H 8 HOH A 79 779 90 HOH HOH . H 8 HOH A 80 780 126 HOH HOH . H 8 HOH A 81 781 106 HOH HOH . H 8 HOH A 82 782 127 HOH HOH . H 8 HOH A 83 783 9 HOH HOH . H 8 HOH A 84 784 119 HOH HOH . H 8 HOH A 85 785 115 HOH HOH . H 8 HOH A 86 786 45 HOH HOH . H 8 HOH A 87 787 142 HOH HOH . H 8 HOH A 88 788 47 HOH HOH . H 8 HOH A 89 789 77 HOH HOH . H 8 HOH A 90 790 66 HOH HOH . H 8 HOH A 91 791 61 HOH HOH . H 8 HOH A 92 792 89 HOH HOH . H 8 HOH A 93 793 68 HOH HOH . H 8 HOH A 94 794 84 HOH HOH . H 8 HOH A 95 795 121 HOH HOH . H 8 HOH A 96 796 125 HOH HOH . H 8 HOH A 97 797 132 HOH HOH . H 8 HOH A 98 798 67 HOH HOH . H 8 HOH A 99 799 131 HOH HOH . H 8 HOH A 100 800 97 HOH HOH . H 8 HOH A 101 801 80 HOH HOH . H 8 HOH A 102 802 18 HOH HOH . H 8 HOH A 103 803 14 HOH HOH . H 8 HOH A 104 804 108 HOH HOH . H 8 HOH A 105 805 128 HOH HOH . H 8 HOH A 106 806 39 HOH HOH . H 8 HOH A 107 807 10 HOH HOH . H 8 HOH A 108 808 65 HOH HOH . H 8 HOH A 109 809 57 HOH HOH . H 8 HOH A 110 810 101 HOH HOH . H 8 HOH A 111 811 73 HOH HOH . H 8 HOH A 112 812 69 HOH HOH . H 8 HOH A 113 813 129 HOH HOH . H 8 HOH A 114 814 134 HOH HOH . H 8 HOH A 115 815 113 HOH HOH . H 8 HOH A 116 816 86 HOH HOH . H 8 HOH A 117 817 3 HOH HOH . H 8 HOH A 118 818 2 HOH HOH . H 8 HOH A 119 819 103 HOH HOH . H 8 HOH A 120 820 78 HOH HOH . H 8 HOH A 121 821 111 HOH HOH . H 8 HOH A 122 822 58 HOH HOH . H 8 HOH A 123 823 120 HOH HOH . H 8 HOH A 124 824 52 HOH HOH . H 8 HOH A 125 825 93 HOH HOH . H 8 HOH A 126 826 48 HOH HOH . H 8 HOH A 127 827 27 HOH HOH . H 8 HOH A 128 828 72 HOH HOH . H 8 HOH A 129 829 17 HOH HOH . H 8 HOH A 130 830 104 HOH HOH . H 8 HOH A 131 831 99 HOH HOH . H 8 HOH A 132 832 1 HOH HOH . H 8 HOH A 133 833 33 HOH HOH . H 8 HOH A 134 834 42 HOH HOH . H 8 HOH A 135 835 43 HOH HOH . H 8 HOH A 136 836 76 HOH HOH . H 8 HOH A 137 837 36 HOH HOH . H 8 HOH A 138 838 81 HOH HOH . H 8 HOH A 139 839 130 HOH HOH . H 8 HOH A 140 840 15 HOH HOH . H 8 HOH A 141 841 56 HOH HOH . H 8 HOH A 142 842 105 HOH HOH . H 8 HOH A 143 843 53 HOH HOH . H 8 HOH A 144 844 114 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 7 _atom_site.Cartn_x 32.975 _atom_site.Cartn_y 32.975 _atom_site.Cartn_z 0 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 132.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 605 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #