data_6XZ3 # _model_server_result.job_id EtzsxpJeU2aK38kTFjGkTw _model_server_result.datetime_utc '2024-12-23 06:45:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xz3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6XZ3 # _exptl.entry_id 6XZ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XZ3 _cell.length_a 114.595 _cell.length_b 114.595 _cell.length_c 59.404 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XZ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_545 y+1/2,x-1/2,-z+1/2 0 1 0 1 0 0 0 0 -1 57.2975 -57.2975 29.702 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6XZ3 _atom_sites.fract_transf_matrix[1][1] 0.008726 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008726 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016834 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 271 EDO EDO . C 3 HOH A 1 401 273 HOH HOH . C 3 HOH A 2 402 275 HOH HOH . C 3 HOH A 3 403 292 HOH HOH . C 3 HOH A 4 404 310 HOH HOH . C 3 HOH A 5 405 274 HOH HOH . C 3 HOH A 6 406 290 HOH HOH . C 3 HOH A 7 407 276 HOH HOH . C 3 HOH A 8 408 288 HOH HOH . C 3 HOH A 9 409 282 HOH HOH . C 3 HOH A 10 410 279 HOH HOH . C 3 HOH A 11 411 287 HOH HOH . C 3 HOH A 12 412 272 HOH HOH . C 3 HOH A 13 413 283 HOH HOH . C 3 HOH A 14 414 295 HOH HOH . C 3 HOH A 15 415 285 HOH HOH . C 3 HOH A 16 416 280 HOH HOH . C 3 HOH A 17 417 296 HOH HOH . C 3 HOH A 18 418 281 HOH HOH . C 3 HOH A 19 419 277 HOH HOH . C 3 HOH A 20 420 311 HOH HOH . C 3 HOH A 21 421 289 HOH HOH . C 3 HOH A 22 422 297 HOH HOH . C 3 HOH A 23 423 312 HOH HOH . C 3 HOH A 24 424 284 HOH HOH . C 3 HOH A 25 425 294 HOH HOH . C 3 HOH A 26 426 293 HOH HOH . C 3 HOH A 27 427 291 HOH HOH . C 3 HOH A 28 428 286 HOH HOH . C 3 HOH A 29 429 278 HOH HOH . C 3 HOH A 30 430 298 HOH HOH . C 3 HOH A 31 431 299 HOH HOH . C 3 HOH A 32 432 304 HOH HOH . C 3 HOH A 33 433 303 HOH HOH . C 3 HOH A 34 434 300 HOH HOH . C 3 HOH A 35 435 305 HOH HOH . C 3 HOH A 36 436 302 HOH HOH . C 3 HOH A 37 437 301 HOH HOH . C 3 HOH A 38 438 306 HOH HOH . C 3 HOH A 39 439 308 HOH HOH . C 3 HOH A 40 440 309 HOH HOH . C 3 HOH A 41 441 307 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 48.425 6.341 8.783 1 108.59 ? C1 EDO 301 A 1 HETATM 2 O O1 EDO . . . B 2 48.926 7.443 9.535 1 92.08 ? O1 EDO 301 A 1 HETATM 3 C C2 EDO . . . B 2 49.211 6.082 7.548 1 112.4 ? C2 EDO 301 A 1 HETATM 4 O O2 EDO . . . B 2 50.596 5.981 7.841 1 110.36 ? O2 EDO 301 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 1397 _model_server_stats.encode_time_ms 22 _model_server_stats.element_count 4 #