data_6XZ9 # _model_server_result.job_id uGuzCYKjyYXX3l1BIqUXCw _model_server_result.datetime_utc '2024-12-23 14:58:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6xz9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":602}' # _entry.id 6XZ9 # _exptl.entry_id 6XZ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 451.905 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-chloranyl-3,3-dimethyl-2-[5-[1-(1-methylpyrazol-4-yl)carbonylazetidin-3-yl]oxypyridin-3-yl]isoindol-1-one _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6XZ9 _cell.length_a 107.682 _cell.length_b 121.603 _cell.length_c 298.702 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XZ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 427 A CYS 450 1_555 D FE HEC . A HEC 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc2 D FE HEC . A HEC 601 1_555 E N19 O4W . A O4W 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc3 B SG CYS 427 B CYS 450 1_555 F FE HEC . B HEC 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc4 F FE HEC . B HEC 601 1_555 G N19 O4W . B O4W 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc5 C SG CYS 427 C CYS 450 1_555 H FE HEC . C HEC 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc6 H FE HEC . C HEC 601 1_555 I N19 O4W . C O4W 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? # _chem_comp.formula 'C23 H22 Cl N5 O3' _chem_comp.formula_weight 451.905 _chem_comp.id O4W _chem_comp.mon_nstd_flag . _chem_comp.name 5-chloranyl-3,3-dimethyl-2-[5-[1-(1-methylpyrazol-4-yl)carbonylazetidin-3-yl]oxypyridin-3-yl]isoindol-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C32 N30 O4W sing 321 n n N29 N30 O4W sing 322 n y N29 C28 O4W doub 323 n y N30 C31 O4W sing 324 n y C28 C27 O4W sing 325 n y C31 C27 O4W doub 326 n y C27 C25 O4W sing 327 n n C23 N24 O4W sing 328 n n C23 C21 O4W sing 329 n n C25 N24 O4W sing 330 n n C25 O26 O4W doub 331 n n N24 C22 O4W sing 332 n n O20 C21 O4W sing 333 n n O20 C15 O4W sing 334 n n C21 C22 O4W sing 335 n n C17 C15 O4W doub 336 n y C17 N19 O4W sing 337 n y C15 C16 O4W sing 338 n y N19 C18 O4W doub 339 n y C16 C14 O4W doub 340 n y C18 C14 O4W sing 341 n y C14 N9 O4W sing 342 n n O12 C7 O4W doub 343 n n N9 C7 O4W sing 344 n n N9 C8 O4W sing 345 n n C7 C4 O4W sing 346 n n C11 C8 O4W sing 347 n n C8 C13 O4W sing 348 n n C8 C2 O4W sing 349 n n C4 C2 O4W doub 350 n y C4 C6 O4W sing 351 n y C2 C3 O4W sing 352 n y C6 C5 O4W doub 353 n y C3 C1 O4W doub 354 n y C5 C1 O4W sing 355 n y C1 CL1 O4W sing 356 n n C3 H1 O4W sing 357 n n C5 H2 O4W sing 358 n n C6 H3 O4W sing 359 n n C16 H4 O4W sing 360 n n C32 H5 O4W sing 361 n n C32 H6 O4W sing 362 n n C32 H7 O4W sing 363 n n C11 H8 O4W sing 364 n n C11 H9 O4W sing 365 n n C11 H10 O4W sing 366 n n C13 H11 O4W sing 367 n n C13 H12 O4W sing 368 n n C13 H13 O4W sing 369 n n C17 H14 O4W sing 370 n n C18 H15 O4W sing 371 n n C21 H16 O4W sing 372 n n C22 H17 O4W sing 373 n n C22 H18 O4W sing 374 n n C23 H19 O4W sing 375 n n C23 H20 O4W sing 376 n n C28 H21 O4W sing 377 n n C31 H22 O4W sing 378 n n # _atom_sites.entry_id 6XZ9 _atom_sites.fract_transf_matrix[1][1] 0.009287 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008223 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003348 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HEC A 1 601 1 HEC HEM . E 3 O4W A 1 602 3 O4W 234 . F 2 HEC B 1 601 2 HEC HEM . G 3 O4W B 1 602 2 O4W 234 . H 2 HEC C 1 601 3 HEC HEM . I 3 O4W C 1 602 1 O4W 234 . J 4 HOH A 1 701 2135 HOH HOH . J 4 HOH A 2 702 2214 HOH HOH . J 4 HOH A 3 703 1033 HOH HOH . J 4 HOH A 4 704 1084 HOH HOH . J 4 HOH A 5 705 1029 HOH HOH . J 4 HOH A 6 706 2155 HOH HOH . J 4 HOH A 7 707 1004 HOH HOH . J 4 HOH A 8 708 1106 HOH HOH . J 4 HOH A 9 709 2175 HOH HOH . J 4 HOH A 10 710 2225 HOH HOH . J 4 HOH A 11 711 1017 HOH HOH . J 4 HOH A 12 712 2208 HOH HOH . J 4 HOH A 13 713 2148 HOH HOH . J 4 HOH A 14 714 2134 HOH HOH . J 4 HOH A 15 715 1057 HOH HOH . J 4 HOH A 16 716 2156 HOH HOH . J 4 HOH A 17 717 2145 HOH HOH . J 4 HOH A 18 718 2223 HOH HOH . J 4 HOH A 19 719 2180 HOH HOH . J 4 HOH A 20 720 2071 HOH HOH . J 4 HOH A 21 721 2197 HOH HOH . J 4 HOH A 22 722 2196 HOH HOH . J 4 HOH A 23 723 2212 HOH HOH . J 4 HOH A 24 724 2137 HOH HOH . J 4 HOH A 25 725 2224 HOH HOH . J 4 HOH A 26 726 2160 HOH HOH . J 4 HOH A 27 727 1080 HOH HOH . J 4 HOH A 28 728 1019 HOH HOH . J 4 HOH A 29 729 2189 HOH HOH . J 4 HOH A 30 730 1053 HOH HOH . J 4 HOH A 31 731 2102 HOH HOH . J 4 HOH A 32 732 2203 HOH HOH . J 4 HOH A 33 733 1044 HOH HOH . J 4 HOH A 34 734 2211 HOH HOH . J 4 HOH A 35 735 1055 HOH HOH . J 4 HOH A 36 736 1054 HOH HOH . J 4 HOH A 37 737 2147 HOH HOH . J 4 HOH A 38 738 2217 HOH HOH . J 4 HOH A 39 739 1006 HOH HOH . J 4 HOH A 40 740 2128 HOH HOH . J 4 HOH A 41 741 2165 HOH HOH . J 4 HOH A 42 742 2084 HOH HOH . K 4 HOH B 1 701 1024 HOH HOH . K 4 HOH B 2 702 2216 HOH HOH . K 4 HOH B 3 703 1092 HOH HOH . K 4 HOH B 4 704 1109 HOH HOH . K 4 HOH B 5 705 2150 HOH HOH . K 4 HOH B 6 706 1034 HOH HOH . K 4 HOH B 7 707 2154 HOH HOH . K 4 HOH B 8 708 2184 HOH HOH . K 4 HOH B 9 709 1078 HOH HOH . K 4 HOH B 10 710 2185 HOH HOH . K 4 HOH B 11 711 1032 HOH HOH . K 4 HOH B 12 712 1003 HOH HOH . K 4 HOH B 13 713 2222 HOH HOH . K 4 HOH B 14 714 1010 HOH HOH . K 4 HOH B 15 715 2144 HOH HOH . K 4 HOH B 16 716 1027 HOH HOH . K 4 HOH B 17 717 2142 HOH HOH . K 4 HOH B 18 718 1038 HOH HOH . K 4 HOH B 19 719 2159 HOH HOH . K 4 HOH B 20 720 1042 HOH HOH . K 4 HOH B 21 721 2195 HOH HOH . K 4 HOH B 22 722 2140 HOH HOH . K 4 HOH B 23 723 1007 HOH HOH . K 4 HOH B 24 724 2179 HOH HOH . K 4 HOH B 25 725 2166 HOH HOH . K 4 HOH B 26 726 2091 HOH HOH . K 4 HOH B 27 727 1031 HOH HOH . K 4 HOH B 28 728 2205 HOH HOH . K 4 HOH B 29 729 1047 HOH HOH . K 4 HOH B 30 730 1039 HOH HOH . K 4 HOH B 31 731 1101 HOH HOH . K 4 HOH B 32 732 2133 HOH HOH . K 4 HOH B 33 733 2157 HOH HOH . K 4 HOH B 34 734 2169 HOH HOH . K 4 HOH B 35 735 2151 HOH HOH . K 4 HOH B 36 736 1100 HOH HOH . K 4 HOH B 37 737 1020 HOH HOH . K 4 HOH B 38 738 1036 HOH HOH . K 4 HOH B 39 739 1002 HOH HOH . K 4 HOH B 40 740 1025 HOH HOH . K 4 HOH B 41 741 2085 HOH HOH . K 4 HOH B 42 742 1050 HOH HOH . K 4 HOH B 43 743 2118 HOH HOH . K 4 HOH B 44 744 2112 HOH HOH . K 4 HOH B 45 745 2138 HOH HOH . K 4 HOH B 46 746 1083 HOH HOH . K 4 HOH B 47 747 2218 HOH HOH . K 4 HOH B 48 748 1049 HOH HOH . L 4 HOH C 1 701 2221 HOH HOH . L 4 HOH C 2 702 2167 HOH HOH . L 4 HOH C 3 703 2117 HOH HOH . L 4 HOH C 4 704 2199 HOH HOH . L 4 HOH C 5 705 2079 HOH HOH . L 4 HOH C 6 706 1062 HOH HOH . L 4 HOH C 7 707 2143 HOH HOH . L 4 HOH C 8 708 2130 HOH HOH . L 4 HOH C 9 709 2220 HOH HOH . L 4 HOH C 10 710 1070 HOH HOH . L 4 HOH C 11 711 2141 HOH HOH . L 4 HOH C 12 712 2202 HOH HOH . L 4 HOH C 13 713 2171 HOH HOH . L 4 HOH C 14 714 1009 HOH HOH . L 4 HOH C 15 715 2209 HOH HOH . L 4 HOH C 16 716 2149 HOH HOH . L 4 HOH C 17 717 2131 HOH HOH . L 4 HOH C 18 718 2162 HOH HOH . L 4 HOH C 19 719 2200 HOH HOH . L 4 HOH C 20 720 2219 HOH HOH . L 4 HOH C 21 721 1071 HOH HOH . L 4 HOH C 22 722 2210 HOH HOH . L 4 HOH C 23 723 2215 HOH HOH . L 4 HOH C 24 724 2129 HOH HOH . L 4 HOH C 25 725 1058 HOH HOH . L 4 HOH C 26 726 2190 HOH HOH . L 4 HOH C 27 727 1113 HOH HOH . L 4 HOH C 28 728 2172 HOH HOH . L 4 HOH C 29 729 1028 HOH HOH . L 4 HOH C 30 730 2163 HOH HOH . L 4 HOH C 31 731 1051 HOH HOH . L 4 HOH C 32 732 2191 HOH HOH . L 4 HOH C 33 733 1035 HOH HOH . L 4 HOH C 34 734 2136 HOH HOH . L 4 HOH C 35 735 1056 HOH HOH . L 4 HOH C 36 736 2173 HOH HOH . L 4 HOH C 37 737 2116 HOH HOH . L 4 HOH C 38 738 2132 HOH HOH . L 4 HOH C 39 739 2158 HOH HOH . L 4 HOH C 40 740 1091 HOH HOH . L 4 HOH C 41 741 2174 HOH HOH . L 4 HOH C 42 742 1107 HOH HOH . L 4 HOH C 43 743 1073 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 O4W . . . I 3 -22.115 31.228 37.324 1 57.52 ? C1 O4W 602 C 1 HETATM 2 C C2 O4W . . . I 3 -22.943 32.285 35.324 1 47.73 ? C2 O4W 602 C 1 HETATM 3 C C3 O4W . . . I 3 -23.136 31.876 36.633 1 52.24 ? C3 O4W 602 C 1 HETATM 4 C C4 O4W . . . I 3 -21.685 32.067 34.723 1 46.02 ? C4 O4W 602 C 1 HETATM 5 C C5 O4W . . . I 3 -20.889 30.988 36.712 1 52.6 ? C5 O4W 602 C 1 HETATM 6 C C6 O4W . . . I 3 -20.663 31.402 35.414 1 48.36 ? C6 O4W 602 C 1 HETATM 7 C C7 O4W . . . I 3 -21.74 32.597 33.361 1 42.6 ? C7 O4W 602 C 1 HETATM 8 O O12 O4W . . . I 3 -20.801 32.559 32.604 1 42.66 ? O12 O4W 602 C 1 HETATM 9 C C14 O4W . . . I 3 -23.336 33.664 31.882 1 42.63 ? C14 O4W 602 C 1 HETATM 10 C C15 O4W . . . I 3 -23.905 33.207 29.612 1 41.38 ? C15 O4W 602 C 1 HETATM 11 C C16 O4W . . . I 3 -23.396 32.76 30.82 1 42.14 ? C16 O4W 602 C 1 HETATM 12 C C8 O4W . . . I 3 -23.818 32.985 34.293 1 41.22 ? C8 O4W 602 C 1 HETATM 13 C C32 O4W . . . I 3 -28.237 25.247 24.962 1 46.15 ? C32 O4W 602 C 1 HETATM 14 N N9 O4W . . . I 3 -22.931 33.179 33.122 1 41.61 ? N9 O4W 602 C 1 HETATM 15 CL CL1 O4W . . . I 3 -22.385 30.759 38.981 1 68.94 ? CL1 O4W 602 C 1 HETATM 16 C C11 O4W . . . I 3 -25.018 32.13 33.88 1 35.13 ? C11 O4W 602 C 1 HETATM 17 C C13 O4W . . . I 3 -24.385 34.283 34.88 1 39.81 ? C13 O4W 602 C 1 HETATM 18 C C17 O4W . . . I 3 -24.317 34.532 29.512 1 40.93 ? C17 O4W 602 C 1 HETATM 19 C C18 O4W . . . I 3 -23.802 34.964 31.708 1 42.28 ? C18 O4W 602 C 1 HETATM 20 N N19 O4W . . . I 3 -24.275 35.359 30.545 1 40.23 ? N19 O4W 602 C 1 HETATM 21 O O20 O4W . . . I 3 -23.949 32.397 28.526 1 40.49 ? O20 O4W 602 C 1 HETATM 22 C C21 O4W . . . I 3 -24.729 31.213 28.571 1 40.18 ? C21 O4W 602 C 1 HETATM 23 C C22 O4W . . . I 3 -26.233 31.438 28.72 1 41.93 ? C22 O4W 602 C 1 HETATM 24 C C23 O4W . . . I 3 -25.179 30.713 27.199 1 41.78 ? C23 O4W 602 C 1 HETATM 25 N N24 O4W . . . I 3 -26.361 30.219 27.914 1 44.52 ? N24 O4W 602 C 1 HETATM 26 C C25 O4W . . . I 3 -27.197 29.155 27.891 1 47.96 ? C25 O4W 602 C 1 HETATM 27 O O26 O4W . . . I 3 -28.107 29.098 28.708 1 51.27 ? O26 O4W 602 C 1 HETATM 28 C C27 O4W . . . I 3 -27.026 28.044 26.933 1 45.05 ? C27 O4W 602 C 1 HETATM 29 C C28 O4W . . . I 3 -25.816 27.558 26.39 1 42.61 ? C28 O4W 602 C 1 HETATM 30 N N29 O4W . . . I 3 -26.109 26.546 25.628 1 44.93 ? N29 O4W 602 C 1 HETATM 31 N N30 O4W . . . I 3 -27.499 26.315 25.654 1 46.19 ? N30 O4W 602 C 1 HETATM 32 C C31 O4W . . . I 3 -28.047 27.236 26.461 1 45.6 ? C31 O4W 602 C 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #