data_6XZM
#
_model_server_result.job_id            cRyatEVRA7rxVD7X8STjTQ 
_model_server_result.datetime_utc      '2025-03-01 06:16:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xzm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    6XZM 
#
_exptl.entry_id    6XZM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.005 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRATE ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6XZM 
_cell.length_a            98.266 
_cell.length_b            98.266 
_cell.length_c            138.836 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XZM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    'P 32 2"' 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,K 1 1 
B,F,G,H,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 F N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLN 308 A GLN 316 1_555 A N CME 309 A CME 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale2 A C CME 309 A CME 317 1_555 A N SER 310 A SER 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 B C GLN 308 B GLN 316 1_555 B N CME 309 B CME 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale4 B C CME 309 B CME 317 1_555 B N SER 310 B SER 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'N O3 -1' 
_chem_comp.formula_weight    62.005 
_chem_comp.id                NO3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N O1 NO3 doub 258 n n 
N O2 NO3 sing 259 n n 
N O3 NO3 sing 260 n n 
#
_atom_sites.entry_id                     6XZM 
_atom_sites.fract_transf_matrix[1][1]    0.010176 
_atom_sites.fract_transf_matrix[1][2]    0.005875 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011751 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007203 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NO3 A 1 401 1 NO3 NO3 . 
D 2 NO3 A 1 402 3 NO3 NO3 . 
E 3 PEG A 1 403 2 PEG PEG . 
F 2 NO3 B 1 401 2 NO3 NO3 . 
G 2 NO3 B 1 402 4 NO3 NO3 . 
H 3 PEG B 1 403 1 PEG PEG . 
I 3 PEG B 1 404 3 PEG PEG . 
J 4 PGE B 1 405 4 PGE PGE . 
K 5 HOH A 1 501 68 HOH HOH . 
K 5 HOH A 2 502 52 HOH HOH . 
K 5 HOH A 3 503 51 HOH HOH . 
K 5 HOH A 4 504 8 HOH HOH . 
K 5 HOH A 5 505 32 HOH HOH . 
K 5 HOH A 6 506 10 HOH HOH . 
K 5 HOH A 7 507 48 HOH HOH . 
K 5 HOH A 8 508 20 HOH HOH . 
K 5 HOH A 9 509 25 HOH HOH . 
K 5 HOH A 10 510 38 HOH HOH . 
K 5 HOH A 11 511 64 HOH HOH . 
K 5 HOH A 12 512 21 HOH HOH . 
K 5 HOH A 13 513 61 HOH HOH . 
K 5 HOH A 14 514 30 HOH HOH . 
K 5 HOH A 15 515 40 HOH HOH . 
K 5 HOH A 16 516 42 HOH HOH . 
K 5 HOH A 17 517 46 HOH HOH . 
K 5 HOH A 18 518 50 HOH HOH . 
K 5 HOH A 19 519 37 HOH HOH . 
K 5 HOH A 20 520 22 HOH HOH . 
K 5 HOH A 21 521 23 HOH HOH . 
K 5 HOH A 22 522 7 HOH HOH . 
K 5 HOH A 23 523 13 HOH HOH . 
K 5 HOH A 24 524 43 HOH HOH . 
K 5 HOH A 25 525 35 HOH HOH . 
K 5 HOH A 26 526 2 HOH HOH . 
K 5 HOH A 27 527 49 HOH HOH . 
K 5 HOH A 28 528 53 HOH HOH . 
K 5 HOH A 29 529 29 HOH HOH . 
K 5 HOH A 30 530 4 HOH HOH . 
K 5 HOH A 31 531 36 HOH HOH . 
K 5 HOH A 32 532 1 HOH HOH . 
K 5 HOH A 33 533 19 HOH HOH . 
K 5 HOH A 34 534 5 HOH HOH . 
K 5 HOH A 35 535 12 HOH HOH . 
K 5 HOH A 36 536 39 HOH HOH . 
K 5 HOH A 37 537 26 HOH HOH . 
K 5 HOH A 38 538 34 HOH HOH . 
K 5 HOH A 39 539 54 HOH HOH . 
L 5 HOH B 1 501 60 HOH HOH . 
L 5 HOH B 2 502 47 HOH HOH . 
L 5 HOH B 3 503 3 HOH HOH . 
L 5 HOH B 4 504 55 HOH HOH . 
L 5 HOH B 5 505 58 HOH HOH . 
L 5 HOH B 6 506 56 HOH HOH . 
L 5 HOH B 7 507 63 HOH HOH . 
L 5 HOH B 8 508 16 HOH HOH . 
L 5 HOH B 9 509 45 HOH HOH . 
L 5 HOH B 10 510 6 HOH HOH . 
L 5 HOH B 11 511 67 HOH HOH . 
L 5 HOH B 12 512 57 HOH HOH . 
L 5 HOH B 13 513 17 HOH HOH . 
L 5 HOH B 14 514 69 HOH HOH . 
L 5 HOH B 15 515 18 HOH HOH . 
L 5 HOH B 16 516 27 HOH HOH . 
L 5 HOH B 17 517 33 HOH HOH . 
L 5 HOH B 18 518 24 HOH HOH . 
L 5 HOH B 19 519 44 HOH HOH . 
L 5 HOH B 20 520 59 HOH HOH . 
L 5 HOH B 21 521 11 HOH HOH . 
L 5 HOH B 22 522 15 HOH HOH . 
L 5 HOH B 23 523 14 HOH HOH . 
L 5 HOH B 24 524 66 HOH HOH . 
L 5 HOH B 25 525 31 HOH HOH . 
L 5 HOH B 26 526 74 HOH HOH . 
L 5 HOH B 27 527 41 HOH HOH . 
L 5 HOH B 28 528 9 HOH HOH . 
L 5 HOH B 29 529 28 HOH HOH . 
L 5 HOH B 30 530 62 HOH HOH . 
L 5 HOH B 31 531 65 HOH HOH . 
L 5 HOH B 32 532 72 HOH HOH . 
L 5 HOH B 33 533 75 HOH HOH . 
L 5 HOH B 34 534 73 HOH HOH . 
L 5 HOH B 35 535 70 HOH HOH . 
L 5 HOH B 36 536 71 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO3 . . . F 2 37.567 1.906 -3.72 1 52.54 ? N NO3 401 B 1 
HETATM 2 O O1 NO3 . . . F 2 36.947 1.148 -2.885 1 52.93 ? O1 NO3 401 B 1 
HETATM 3 O O2 NO3 . . . F 2 37.29 3.158 -3.735 1 47.99 ? O2 NO3 401 B 1 
HETATM 4 O O3 NO3 . . . F 2 38.484 1.441 -4.517 1 43.55 ? O3 NO3 401 B 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#