data_6XZZ
#
_model_server_result.job_id            -MKDVOOF7DJAT4xMzEwJdg 
_model_server_result.datetime_utc      '2024-11-21 18:09:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6xzz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":207}' 
#
_entry.id    6XZZ 
#
_exptl.entry_id    6XZZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6XZZ 
_cell.length_a            67.014 
_cell.length_b            67.014 
_cell.length_c            152.016 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6XZZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    'P 61 2 (x,y,z+5/12)' 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -25.336 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 36 A SER 39 1_555 I NA NA . A NA 207 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.849 ? 
metalc ? metalc2 A OH TYR 55 A TYR 58 1_555 C NA NA . A NA 201 10_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? 
metalc ? metalc3 A OD1 ASP 60 A ASP 63 1_555 E NA NA . A NA 203 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc4 A OD2 ASP 60 A ASP 63 1_555 E NA NA . A NA 203 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.757 ? 
metalc ? metalc5 A O PRO 73 A PRO 76 1_555 I NA NA . A NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? 
metalc ? metalc6 A O PRO 73 A PRO 76 1_555 I NA NA . A NA 207 12_545 ? ? ? ? ? ? ? ? ? ? ? ? 3.099 ? 
metalc ? metalc7 A O ILE 75 A ILE 78 1_555 I NA NA . A NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc8 C NA NA . A NA 201 1_555 M O HOH . A HOH 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.887 ? 
metalc ? metalc9 F NA NA . A NA 204 1_555 M O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? 
metalc ? metalc10 H NA NA . A NA 206 1_555 M O HOH . A HOH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.949 ? 
metalc ? metalc11 H NA NA . A NA 206 1_555 M O HOH . A HOH 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.804 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6XZZ 
_atom_sites.fract_transf_matrix[1][1]    0.014922 
_atom_sites.fract_transf_matrix[1][2]    0.008615 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017231 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006578 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NA A 1 201 2 NA NA . 
D 3 NA A 1 202 4 NA NA . 
E 3 NA A 1 203 7 NA NA . 
F 3 NA A 1 204 8 NA NA . 
G 3 NA A 1 205 9 NA NA . 
H 3 NA A 1 206 10 NA NA . 
I 3 NA A 1 207 11 NA NA . 
J 4 CL A 1 208 1 CL CL . 
K 4 CL A 1 209 3 CL CL . 
L 5 TFA B 1 1801 1801 TFA TFA . 
M 6 HOH A 1 301 121 HOH HOH . 
M 6 HOH A 2 302 117 HOH HOH . 
M 6 HOH A 3 303 124 HOH HOH . 
M 6 HOH A 4 304 68 HOH HOH . 
M 6 HOH A 5 305 113 HOH HOH . 
M 6 HOH A 6 306 61 HOH HOH . 
M 6 HOH A 7 307 118 HOH HOH . 
M 6 HOH A 8 308 20 HOH HOH . 
M 6 HOH A 9 309 43 HOH HOH . 
M 6 HOH A 10 310 94 HOH HOH . 
M 6 HOH A 11 311 119 HOH HOH . 
M 6 HOH A 12 312 89 HOH HOH . 
M 6 HOH A 13 313 35 HOH HOH . 
M 6 HOH A 14 314 24 HOH HOH . 
M 6 HOH A 15 315 52 HOH HOH . 
M 6 HOH A 16 316 88 HOH HOH . 
M 6 HOH A 17 317 25 HOH HOH . 
M 6 HOH A 18 318 22 HOH HOH . 
M 6 HOH A 19 319 87 HOH HOH . 
M 6 HOH A 20 320 39 HOH HOH . 
M 6 HOH A 21 321 32 HOH HOH . 
M 6 HOH A 22 322 34 HOH HOH . 
M 6 HOH A 23 323 18 HOH HOH . 
M 6 HOH A 24 324 57 HOH HOH . 
M 6 HOH A 25 325 8 HOH HOH . 
M 6 HOH A 26 326 23 HOH HOH . 
M 6 HOH A 27 327 67 HOH HOH . 
M 6 HOH A 28 328 28 HOH HOH . 
M 6 HOH A 29 329 79 HOH HOH . 
M 6 HOH A 30 330 73 HOH HOH . 
M 6 HOH A 31 331 90 HOH HOH . 
M 6 HOH A 32 332 77 HOH HOH . 
M 6 HOH A 33 333 16 HOH HOH . 
M 6 HOH A 34 334 112 HOH HOH . 
M 6 HOH A 35 335 11 HOH HOH . 
M 6 HOH A 36 336 37 HOH HOH . 
M 6 HOH A 37 337 96 HOH HOH . 
M 6 HOH A 38 338 3 HOH HOH . 
M 6 HOH A 39 339 55 HOH HOH . 
M 6 HOH A 40 340 63 HOH HOH . 
M 6 HOH A 41 341 9 HOH HOH . 
M 6 HOH A 42 342 6 HOH HOH . 
M 6 HOH A 43 343 99 HOH HOH . 
M 6 HOH A 44 344 5 HOH HOH . 
M 6 HOH A 45 345 107 HOH HOH . 
M 6 HOH A 46 346 30 HOH HOH . 
M 6 HOH A 47 347 106 HOH HOH . 
M 6 HOH A 48 348 42 HOH HOH . 
M 6 HOH A 49 349 122 HOH HOH . 
M 6 HOH A 50 350 54 HOH HOH . 
M 6 HOH A 51 351 2 HOH HOH . 
M 6 HOH A 52 352 7 HOH HOH . 
M 6 HOH A 53 353 10 HOH HOH . 
M 6 HOH A 54 354 48 HOH HOH . 
M 6 HOH A 55 355 85 HOH HOH . 
M 6 HOH A 56 356 115 HOH HOH . 
M 6 HOH A 57 357 36 HOH HOH . 
M 6 HOH A 58 358 83 HOH HOH . 
M 6 HOH A 59 359 123 HOH HOH . 
M 6 HOH A 60 360 59 HOH HOH . 
M 6 HOH A 61 361 19 HOH HOH . 
M 6 HOH A 62 362 60 HOH HOH . 
M 6 HOH A 63 363 100 HOH HOH . 
M 6 HOH A 64 364 14 HOH HOH . 
M 6 HOH A 65 365 12 HOH HOH . 
M 6 HOH A 66 366 45 HOH HOH . 
M 6 HOH A 67 367 65 HOH HOH . 
M 6 HOH A 68 368 58 HOH HOH . 
M 6 HOH A 69 369 38 HOH HOH . 
M 6 HOH A 70 370 21 HOH HOH . 
M 6 HOH A 71 371 109 HOH HOH . 
M 6 HOH A 72 372 15 HOH HOH . 
M 6 HOH A 73 373 29 HOH HOH . 
M 6 HOH A 74 374 105 HOH HOH . 
M 6 HOH A 75 375 76 HOH HOH . 
M 6 HOH A 76 376 27 HOH HOH . 
M 6 HOH A 77 377 47 HOH HOH . 
M 6 HOH A 78 378 33 HOH HOH . 
M 6 HOH A 79 379 49 HOH HOH . 
M 6 HOH A 80 380 62 HOH HOH . 
M 6 HOH A 81 381 111 HOH HOH . 
M 6 HOH A 82 382 70 HOH HOH . 
M 6 HOH A 83 383 13 HOH HOH . 
M 6 HOH A 84 384 91 HOH HOH . 
M 6 HOH A 85 385 56 HOH HOH . 
M 6 HOH A 86 386 40 HOH HOH . 
M 6 HOH A 87 387 26 HOH HOH . 
M 6 HOH A 88 388 17 HOH HOH . 
M 6 HOH A 89 389 51 HOH HOH . 
M 6 HOH A 90 390 50 HOH HOH . 
M 6 HOH A 91 391 97 HOH HOH . 
M 6 HOH A 92 392 102 HOH HOH . 
M 6 HOH A 93 393 114 HOH HOH . 
M 6 HOH A 94 394 31 HOH HOH . 
M 6 HOH A 95 395 101 HOH HOH . 
M 6 HOH A 96 396 41 HOH HOH . 
M 6 HOH A 97 397 72 HOH HOH . 
M 6 HOH A 98 398 78 HOH HOH . 
M 6 HOH A 99 399 46 HOH HOH . 
M 6 HOH A 100 400 120 HOH HOH . 
M 6 HOH A 101 401 69 HOH HOH . 
M 6 HOH A 102 402 74 HOH HOH . 
M 6 HOH A 103 403 86 HOH HOH . 
M 6 HOH A 104 404 103 HOH HOH . 
M 6 HOH A 105 405 95 HOH HOH . 
M 6 HOH A 106 406 75 HOH HOH . 
M 6 HOH A 107 407 93 HOH HOH . 
M 6 HOH A 108 408 66 HOH HOH . 
M 6 HOH A 109 409 98 HOH HOH . 
M 6 HOH A 110 410 84 HOH HOH . 
M 6 HOH A 111 411 82 HOH HOH . 
N 6 HOH B 1 1901 116 HOH HOH . 
N 6 HOH B 2 1902 108 HOH HOH . 
N 6 HOH B 3 1903 80 HOH HOH . 
N 6 HOH B 4 1904 64 HOH HOH . 
N 6 HOH B 5 1905 104 HOH HOH . 
N 6 HOH B 6 1906 110 HOH HOH . 
N 6 HOH B 7 1907 44 HOH HOH . 
N 6 HOH B 8 1908 81 HOH HOH . 
N 6 HOH B 9 1909 92 HOH HOH . 
N 6 HOH B 10 1910 71 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               21.991 
_atom_site.Cartn_y               -25.957 
_atom_site.Cartn_z               12.02 
_atom_site.occupancy             0.79 
_atom_site.B_iso_or_equiv        44.87 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           207 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#