data_6Y08 # _model_server_result.job_id B3hhbOl7D-luaFFDp9FNKQ _model_server_result.datetime_utc '2024-11-25 03:00:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6y08 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 6Y08 # _exptl.entry_id 6Y08 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 253.278 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Sulfamethoxazole _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.15 _cell.angle_gamma 90 _cell.entry_id 6Y08 _cell.length_a 160.545 _cell.length_b 88.057 _cell.length_c 68.262 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Y08 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C10 H11 N3 O3 S' _chem_comp.formula_weight 253.278 _chem_comp.id 08D _chem_comp.mon_nstd_flag . _chem_comp.name Sulfamethoxazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 4-amino-N-(5-methyl-1,2-oxazol-3-yl)benzenesulfonamide;SMX;SMZ # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N7 C1 08D sing 1 n n C6 C1 08D doub 2 n y C6 C5 08D sing 3 n y C1 C2 08D sing 4 n y C5 C4 08D doub 5 n y C2 C3 08D doub 6 n y C4 C3 08D sing 7 n y C4 S10 08D sing 8 n n N13 C15 08D sing 9 n n N13 S10 08D sing 10 n n C15 C16 08D sing 11 n y C15 N19 08D doub 12 n y C16 C17 08D doub 13 n y N19 O18 08D sing 14 n y C17 O18 08D sing 15 n y C17 C20 08D sing 16 n n S10 O12 08D doub 17 n n S10 O11 08D doub 18 n n C3 H1 08D sing 19 n n C2 H2 08D sing 20 n n C5 H3 08D sing 21 n n C6 H4 08D sing 22 n n N7 H5 08D sing 23 n n N7 H6 08D sing 24 n n N13 H7 08D sing 25 n n C16 H8 08D sing 26 n n C20 H9 08D sing 27 n n C20 H10 08D sing 28 n n C20 H11 08D sing 29 n n # _atom_sites.entry_id 6Y08 _atom_sites.fract_transf_matrix[1][1] 0.006229 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000671 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011356 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014734 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UMP A 1 501 501 UMP UMP . D 3 08D A 1 502 502 08D 08D . E 2 UMP B 1 501 501 UMP UMP . F 3 08D B 1 502 502 08D 08D . G 4 HOH A 1 601 8 HOH HOH . G 4 HOH A 2 602 22 HOH HOH . G 4 HOH A 3 603 64 HOH HOH . G 4 HOH A 4 604 26 HOH HOH . G 4 HOH A 5 605 43 HOH HOH . G 4 HOH A 6 606 52 HOH HOH . G 4 HOH A 7 607 1 HOH HOH . G 4 HOH A 8 608 75 HOH HOH . G 4 HOH A 9 609 19 HOH HOH . G 4 HOH A 10 610 167 HOH HOH . G 4 HOH A 11 611 11 HOH HOH . G 4 HOH A 12 612 24 HOH HOH . G 4 HOH A 13 613 53 HOH HOH . G 4 HOH A 14 614 39 HOH HOH . G 4 HOH A 15 615 209 HOH HOH . G 4 HOH A 16 616 50 HOH HOH . G 4 HOH A 17 617 9 HOH HOH . G 4 HOH A 18 618 21 HOH HOH . G 4 HOH A 19 619 54 HOH HOH . G 4 HOH A 20 620 73 HOH HOH . G 4 HOH A 21 621 215 HOH HOH . G 4 HOH A 22 622 66 HOH HOH . G 4 HOH A 23 623 35 HOH HOH . G 4 HOH A 24 624 4 HOH HOH . G 4 HOH A 25 625 58 HOH HOH . G 4 HOH A 26 626 208 HOH HOH . G 4 HOH A 27 627 197 HOH HOH . G 4 HOH A 28 628 33 HOH HOH . G 4 HOH A 29 629 99 HOH HOH . G 4 HOH A 30 630 27 HOH HOH . G 4 HOH A 31 631 102 HOH HOH . G 4 HOH A 32 632 15 HOH HOH . G 4 HOH A 33 633 76 HOH HOH . G 4 HOH A 34 634 59 HOH HOH . G 4 HOH A 35 635 37 HOH HOH . G 4 HOH A 36 636 93 HOH HOH . H 4 HOH B 1 601 38 HOH HOH . H 4 HOH B 2 602 200 HOH HOH . H 4 HOH B 3 603 17 HOH HOH . H 4 HOH B 4 604 3 HOH HOH . H 4 HOH B 5 605 74 HOH HOH . H 4 HOH B 6 606 51 HOH HOH . H 4 HOH B 7 607 211 HOH HOH . H 4 HOH B 8 608 195 HOH HOH . H 4 HOH B 9 609 42 HOH HOH . H 4 HOH B 10 610 20 HOH HOH . H 4 HOH B 11 611 13 HOH HOH . H 4 HOH B 12 612 194 HOH HOH . H 4 HOH B 13 613 16 HOH HOH . H 4 HOH B 14 614 23 HOH HOH . H 4 HOH B 15 615 82 HOH HOH . H 4 HOH B 16 616 88 HOH HOH . H 4 HOH B 17 617 14 HOH HOH . H 4 HOH B 18 618 61 HOH HOH . H 4 HOH B 19 619 31 HOH HOH . H 4 HOH B 20 620 30 HOH HOH . H 4 HOH B 21 621 47 HOH HOH . H 4 HOH B 22 622 41 HOH HOH . H 4 HOH B 23 623 69 HOH HOH . H 4 HOH B 24 624 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O12 08D . . . D 3 19.752 -22.843 3.144 0.88 52.75 ? O12 08D 502 A 1 HETATM 2 S S10 08D . . . D 3 18.328 -22.924 2.942 0.88 60.15 ? S10 08D 502 A 1 HETATM 3 O O11 08D . . . D 3 17.728 -24.099 2.33 0.88 58.92 ? O11 08D 502 A 1 HETATM 4 C C4 08D . . . D 3 17.499 -22.666 4.489 0.88 51.76 ? C4 08D 502 A 1 HETATM 5 C C3 08D . . . D 3 17.437 -23.698 5.395 0.88 54.05 ? C3 08D 502 A 1 HETATM 6 C C2 08D . . . D 3 16.76 -23.494 6.58 0.88 47.92 ? C2 08D 502 A 1 HETATM 7 C C5 08D . . . D 3 16.903 -21.447 4.698 0.88 49.29 ? C5 08D 502 A 1 HETATM 8 C C6 08D . . . D 3 16.232 -21.265 5.887 0.88 53.45 ? C6 08D 502 A 1 HETATM 9 C C1 08D . . . D 3 16.157 -22.279 6.826 0.88 52.38 ? C1 08D 502 A 1 HETATM 10 N N7 08D . . . D 3 15.491 -22.075 8.039 0.88 52.18 ? N7 08D 502 A 1 HETATM 11 N N13 08D . . . D 3 17.792 -21.489 2.182 0.88 56.48 ? N13 08D 502 A 1 HETATM 12 C C15 08D . . . D 3 16.816 -21.563 1.177 0.88 52.5 ? C15 08D 502 A 1 HETATM 13 N N19 08D . . . D 3 16.685 -22.62 0.372 0.88 54.48 ? N19 08D 502 A 1 HETATM 14 O O18 08D . . . D 3 15.655 -22.288 -0.498 0.88 53.58 ? O18 08D 502 A 1 HETATM 15 C C17 08D . . . D 3 15.202 -21.046 -0.189 0.88 48.49 ? C17 08D 502 A 1 HETATM 16 C C16 08D . . . D 3 15.903 -20.526 0.869 0.88 48.78 ? C16 08D 502 A 1 HETATM 17 C C20 08D . . . D 3 14.089 -20.582 -1.019 0.88 50.5 ? C20 08D 502 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #