data_6Y0Q # _model_server_result.job_id t2ahYhDFT4ubMFiZpVedAg _model_server_result.datetime_utc '2024-11-25 08:24:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6y0q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6Y0Q # _exptl.entry_id 6Y0Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 78.99 _cell.angle_beta 78.04 _cell.angle_gamma 66.88 _cell.entry_id 6Y0Q _cell.length_a 36.399 _cell.length_b 39.078 _cell.length_c 40.84 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Y0Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 131 A HIS 131 1_555 C FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc2 A OD1 ASP 133 A ASP 133 1_555 C FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc3 A NE2 HIS 187 A HIS 187 1_555 C FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc4 B O2 AKG . A AKG 301 1_555 C FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc5 B O5 AKG . A AKG 301 1_555 C FE FE . A FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc6 C FE FE . A FE 302 1_555 E O HOH . A HOH 496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6Y0Q _atom_sites.fract_transf_matrix[1][1] 0.027473 _atom_sites.fract_transf_matrix[1][2] -0.01173 _atom_sites.fract_transf_matrix[1][3] -0.004424 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027825 _atom_sites.fract_transf_matrix[2][3] -0.003415 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025217 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AKG A 1 301 1 AKG AKG . C 3 FE A 1 302 1 FE FE . D 4 O5W A 1 303 2 O5W YZ2 . E 5 HOH A 1 401 52 HOH HOH . E 5 HOH A 2 402 70 HOH HOH . E 5 HOH A 3 403 91 HOH HOH . E 5 HOH A 4 404 60 HOH HOH . E 5 HOH A 5 405 45 HOH HOH . E 5 HOH A 6 406 33 HOH HOH . E 5 HOH A 7 407 103 HOH HOH . E 5 HOH A 8 408 143 HOH HOH . E 5 HOH A 9 409 58 HOH HOH . E 5 HOH A 10 410 96 HOH HOH . E 5 HOH A 11 411 22 HOH HOH . E 5 HOH A 12 412 95 HOH HOH . E 5 HOH A 13 413 42 HOH HOH . E 5 HOH A 14 414 64 HOH HOH . E 5 HOH A 15 415 34 HOH HOH . E 5 HOH A 16 416 11 HOH HOH . E 5 HOH A 17 417 13 HOH HOH . E 5 HOH A 18 418 123 HOH HOH . E 5 HOH A 19 419 138 HOH HOH . E 5 HOH A 20 420 24 HOH HOH . E 5 HOH A 21 421 18 HOH HOH . E 5 HOH A 22 422 31 HOH HOH . E 5 HOH A 23 423 71 HOH HOH . E 5 HOH A 24 424 5 HOH HOH . E 5 HOH A 25 425 10 HOH HOH . E 5 HOH A 26 426 9 HOH HOH . E 5 HOH A 27 427 14 HOH HOH . E 5 HOH A 28 428 3 HOH HOH . E 5 HOH A 29 429 79 HOH HOH . E 5 HOH A 30 430 4 HOH HOH . E 5 HOH A 31 431 72 HOH HOH . E 5 HOH A 32 432 83 HOH HOH . E 5 HOH A 33 433 2 HOH HOH . E 5 HOH A 34 434 15 HOH HOH . E 5 HOH A 35 435 73 HOH HOH . E 5 HOH A 36 436 87 HOH HOH . E 5 HOH A 37 437 20 HOH HOH . E 5 HOH A 38 438 78 HOH HOH . E 5 HOH A 39 439 17 HOH HOH . E 5 HOH A 40 440 1 HOH HOH . E 5 HOH A 41 441 23 HOH HOH . E 5 HOH A 42 442 67 HOH HOH . E 5 HOH A 43 443 63 HOH HOH . E 5 HOH A 44 444 27 HOH HOH . E 5 HOH A 45 445 124 HOH HOH . E 5 HOH A 46 446 90 HOH HOH . E 5 HOH A 47 447 19 HOH HOH . E 5 HOH A 48 448 38 HOH HOH . E 5 HOH A 49 449 55 HOH HOH . E 5 HOH A 50 450 7 HOH HOH . E 5 HOH A 51 451 66 HOH HOH . E 5 HOH A 52 452 6 HOH HOH . E 5 HOH A 53 453 89 HOH HOH . E 5 HOH A 54 454 92 HOH HOH . E 5 HOH A 55 455 48 HOH HOH . E 5 HOH A 56 456 133 HOH HOH . E 5 HOH A 57 457 29 HOH HOH . E 5 HOH A 58 458 57 HOH HOH . E 5 HOH A 59 459 37 HOH HOH . E 5 HOH A 60 460 61 HOH HOH . E 5 HOH A 61 461 68 HOH HOH . E 5 HOH A 62 462 84 HOH HOH . E 5 HOH A 63 463 40 HOH HOH . E 5 HOH A 64 464 12 HOH HOH . E 5 HOH A 65 465 50 HOH HOH . E 5 HOH A 66 466 141 HOH HOH . E 5 HOH A 67 467 35 HOH HOH . E 5 HOH A 68 468 65 HOH HOH . E 5 HOH A 69 469 69 HOH HOH . E 5 HOH A 70 470 75 HOH HOH . E 5 HOH A 71 471 54 HOH HOH . E 5 HOH A 72 472 85 HOH HOH . E 5 HOH A 73 473 99 HOH HOH . E 5 HOH A 74 474 142 HOH HOH . E 5 HOH A 75 475 76 HOH HOH . E 5 HOH A 76 476 100 HOH HOH . E 5 HOH A 77 477 43 HOH HOH . E 5 HOH A 78 478 16 HOH HOH . E 5 HOH A 79 479 46 HOH HOH . E 5 HOH A 80 480 26 HOH HOH . E 5 HOH A 81 481 104 HOH HOH . E 5 HOH A 82 482 125 HOH HOH . E 5 HOH A 83 483 105 HOH HOH . E 5 HOH A 84 484 115 HOH HOH . E 5 HOH A 85 485 112 HOH HOH . E 5 HOH A 86 486 28 HOH HOH . E 5 HOH A 87 487 41 HOH HOH . E 5 HOH A 88 488 30 HOH HOH . E 5 HOH A 89 489 128 HOH HOH . E 5 HOH A 90 490 21 HOH HOH . E 5 HOH A 91 491 62 HOH HOH . E 5 HOH A 92 492 47 HOH HOH . E 5 HOH A 93 493 25 HOH HOH . E 5 HOH A 94 494 118 HOH HOH . E 5 HOH A 95 495 129 HOH HOH . E 5 HOH A 96 496 8 HOH HOH . E 5 HOH A 97 497 59 HOH HOH . E 5 HOH A 98 498 109 HOH HOH . E 5 HOH A 99 499 106 HOH HOH . E 5 HOH A 100 500 116 HOH HOH . E 5 HOH A 101 501 56 HOH HOH . E 5 HOH A 102 502 110 HOH HOH . E 5 HOH A 103 503 36 HOH HOH . E 5 HOH A 104 504 86 HOH HOH . E 5 HOH A 105 505 82 HOH HOH . E 5 HOH A 106 506 49 HOH HOH . E 5 HOH A 107 507 77 HOH HOH . E 5 HOH A 108 508 53 HOH HOH . E 5 HOH A 109 509 101 HOH HOH . E 5 HOH A 110 510 81 HOH HOH . E 5 HOH A 111 511 121 HOH HOH . E 5 HOH A 112 512 140 HOH HOH . E 5 HOH A 113 513 51 HOH HOH . E 5 HOH A 114 514 88 HOH HOH . E 5 HOH A 115 515 113 HOH HOH . E 5 HOH A 116 516 108 HOH HOH . E 5 HOH A 117 517 136 HOH HOH . E 5 HOH A 118 518 39 HOH HOH . E 5 HOH A 119 519 134 HOH HOH . E 5 HOH A 120 520 135 HOH HOH . E 5 HOH A 121 521 97 HOH HOH . E 5 HOH A 122 522 98 HOH HOH . E 5 HOH A 123 523 111 HOH HOH . E 5 HOH A 124 524 107 HOH HOH . E 5 HOH A 125 525 132 HOH HOH . E 5 HOH A 126 526 120 HOH HOH . E 5 HOH A 127 527 119 HOH HOH . E 5 HOH A 128 528 80 HOH HOH . E 5 HOH A 129 529 44 HOH HOH . E 5 HOH A 130 530 122 HOH HOH . E 5 HOH A 131 531 93 HOH HOH . E 5 HOH A 132 532 114 HOH HOH . E 5 HOH A 133 533 94 HOH HOH . E 5 HOH A 134 534 74 HOH HOH . E 5 HOH A 135 535 127 HOH HOH . E 5 HOH A 136 536 130 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -3.326 _atom_site.Cartn_y -0.3 _atom_site.Cartn_z 4.919 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #