data_6Y14 # _model_server_result.job_id 0l2vD4oYhXw03ry2Z2Kn3Q _model_server_result.datetime_utc '2024-11-25 10:27:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6y14 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6Y14 # _exptl.entry_id 6Y14 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 111.28 _cell.angle_beta 92.26 _cell.angle_gamma 101.96 _cell.entry_id 6Y14 _cell.length_a 16.482 _cell.length_b 26.209 _cell.length_c 29.909 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Y14 _symmetry.cell_setting ? _symmetry.Int_Tables_number 2 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P -1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A CAJ O65 1 A O65 101 1_555 A N LYS 2 A LYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A CAH O65 1 A O65 101 1_555 A SG CYS 7 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? covale ? covale3 A CAM O65 1 A O65 101 1_555 A SG CYS 10 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.804 ? covale ? covale4 A C LEU 12 A LEU 112 1_555 A N NH2 13 A NH2 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.273 ? covale ? covale5 B CAJ O65 1 B O65 101 1_555 B N LYS 2 B LYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.389 ? covale ? covale6 B CAH O65 1 B O65 101 1_555 B SG CYS 7 B CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? covale ? covale7 B CAM O65 1 B O65 101 1_555 B SG CYS 10 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.837 ? covale ? covale8 B C LEU 12 B LEU 112 1_555 B N NH2 13 B NH2 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.271 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 1 n n C1 O2 CIT sing 2 n n C1 C2 CIT sing 3 n n O2 HO2 CIT sing 4 n n C2 C3 CIT sing 5 n n C2 H21 CIT sing 6 n n C2 H22 CIT sing 7 n n C3 O7 CIT sing 8 n n C3 C4 CIT sing 9 n n C3 C6 CIT sing 10 n n O7 HO7 CIT sing 11 n n C4 C5 CIT sing 12 n n C4 H41 CIT sing 13 n n C4 H42 CIT sing 14 n n C5 O3 CIT doub 15 n n C5 O4 CIT sing 16 n n O4 HO4 CIT sing 17 n n C6 O5 CIT doub 18 n n C6 O6 CIT sing 19 n n O6 HO6 CIT sing 20 n n # _atom_sites.entry_id 6Y14 _atom_sites.fract_transf_matrix[1][1] 0.060672 _atom_sites.fract_transf_matrix[1][2] 0.012852 _atom_sites.fract_transf_matrix[1][3] 0.007862 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.039001 _atom_sites.fract_transf_matrix[2][3] 0.016004 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.036168 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 201 1 CIT CIT . D 2 CIT B 1 201 2 CIT CIT . E 3 HOH A 1 301 2 HOH HOH . E 3 HOH A 2 302 27 HOH HOH . E 3 HOH A 3 303 8 HOH HOH . E 3 HOH A 4 304 16 HOH HOH . E 3 HOH A 5 305 4 HOH HOH . E 3 HOH A 6 306 5 HOH HOH . E 3 HOH A 7 307 11 HOH HOH . E 3 HOH A 8 308 3 HOH HOH . F 3 HOH B 1 301 9 HOH HOH . F 3 HOH B 2 302 28 HOH HOH . F 3 HOH B 3 303 12 HOH HOH . F 3 HOH B 4 304 1 HOH HOH . F 3 HOH B 5 305 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . C 2 -1.889 5.931 11.843 1 3.95 ? C1 CIT 201 A 1 HETATM 2 O O1 CIT . . . C 2 -2.042 4.702 11.878 1 3.95 ? O1 CIT 201 A 1 HETATM 3 O O2 CIT . . . C 2 -2.6 6.759 12.489 1 3.95 ? O2 CIT 201 A 1 HETATM 4 C C2 CIT . . . C 2 -0.714 6.462 11.006 1 3.95 ? C2 CIT 201 A 1 HETATM 5 C C3 CIT . . . C 2 0.415 7.016 11.895 1 3.95 ? C3 CIT 201 A 1 HETATM 6 O O7 CIT . . . C 2 0.119 8.326 12.401 1 3.95 ? O7 CIT 201 A 1 HETATM 7 C C4 CIT . . . C 2 0.809 6.066 12.998 1 3.95 ? C4 CIT 201 A 1 HETATM 8 C C5 CIT . . . C 2 2.045 6.512 13.817 1 3.95 ? C5 CIT 201 A 1 HETATM 9 O O3 CIT . . . C 2 2.867 7.313 13.31 1 3.95 ? O3 CIT 201 A 1 HETATM 10 O O4 CIT . . . C 2 2.203 6.004 14.938 1 3.95 ? O4 CIT 201 A 1 HETATM 11 C C6 CIT . . . C 2 1.594 7.324 10.901 1 3.95 ? C6 CIT 201 A 1 HETATM 12 O O5 CIT . . . C 2 2.238 6.438 10.326 1 3.95 ? O5 CIT 201 A 1 HETATM 13 O O6 CIT . . . C 2 1.788 8.57 10.783 1 3.95 ? O6 CIT 201 A 1 HETATM 14 H H21 CIT . . . C 2 -1.032 7.165 10.418 1 3.95 ? H21 CIT 201 A 1 HETATM 15 H H22 CIT . . . C 2 -0.364 5.746 10.454 1 3.95 ? H22 CIT 201 A 1 HETATM 16 H HO7 CIT . . . C 2 0.689 8.543 12.949 1 3.95 ? HO7 CIT 201 A 1 HETATM 17 H H41 CIT . . . C 2 0.992 5.197 12.609 1 3.95 ? H41 CIT 201 A 1 HETATM 18 H H42 CIT . . . C 2 0.057 5.964 13.603 1 3.95 ? H42 CIT 201 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #