data_6Y2V # _model_server_result.job_id fD5Er12l62fUUAhWU-fZ_A _model_server_result.datetime_utc '2024-10-20 20:43:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6y2v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6Y2V # _exptl.entry_id 6Y2V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.809 _cell.angle_gamma 90 _cell.entry_id 6Y2V _cell.length_a 56.625 _cell.length_b 41.287 _cell.length_c 56.898 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Y2V _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 237 n n C1 C2 PGE sing 238 n n C1 H1 PGE sing 239 n n C1 H12 PGE sing 240 n n O1 HO1 PGE sing 241 n n C2 O2 PGE sing 242 n n C2 H2 PGE sing 243 n n C2 H22 PGE sing 244 n n O2 C3 PGE sing 245 n n C3 C4 PGE sing 246 n n C3 H3 PGE sing 247 n n C3 H32 PGE sing 248 n n C4 O3 PGE sing 249 n n C4 H4 PGE sing 250 n n C4 H42 PGE sing 251 n n O4 C6 PGE sing 252 n n O4 HO4 PGE sing 253 n n C6 C5 PGE sing 254 n n C6 H6 PGE sing 255 n n C6 H62 PGE sing 256 n n C5 O3 PGE sing 257 n n C5 H5 PGE sing 258 n n C5 H52 PGE sing 259 n n # _atom_sites.entry_id 6Y2V _atom_sites.fract_transf_matrix[1][1] 0.01766 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000558 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024221 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017584 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PGE A 1 201 1 PGE PGE . C 3 PO4 A 1 202 1 PO4 PO4 . D 4 HOH A 1 301 100 HOH HOH . D 4 HOH A 2 302 70 HOH HOH . D 4 HOH A 3 303 40 HOH HOH . D 4 HOH A 4 304 50 HOH HOH . D 4 HOH A 5 305 48 HOH HOH . D 4 HOH A 6 306 86 HOH HOH . D 4 HOH A 7 307 71 HOH HOH . D 4 HOH A 8 308 21 HOH HOH . D 4 HOH A 9 309 6 HOH HOH . D 4 HOH A 10 310 52 HOH HOH . D 4 HOH A 11 311 102 HOH HOH . D 4 HOH A 12 312 12 HOH HOH . D 4 HOH A 13 313 38 HOH HOH . D 4 HOH A 14 314 101 HOH HOH . D 4 HOH A 15 315 8 HOH HOH . D 4 HOH A 16 316 83 HOH HOH . D 4 HOH A 17 317 41 HOH HOH . D 4 HOH A 18 318 42 HOH HOH . D 4 HOH A 19 319 27 HOH HOH . D 4 HOH A 20 320 14 HOH HOH . D 4 HOH A 21 321 79 HOH HOH . D 4 HOH A 22 322 1 HOH HOH . D 4 HOH A 23 323 33 HOH HOH . D 4 HOH A 24 324 19 HOH HOH . D 4 HOH A 25 325 23 HOH HOH . D 4 HOH A 26 326 45 HOH HOH . D 4 HOH A 27 327 29 HOH HOH . D 4 HOH A 28 328 25 HOH HOH . D 4 HOH A 29 329 9 HOH HOH . D 4 HOH A 30 330 18 HOH HOH . D 4 HOH A 31 331 4 HOH HOH . D 4 HOH A 32 332 63 HOH HOH . D 4 HOH A 33 333 30 HOH HOH . D 4 HOH A 34 334 43 HOH HOH . D 4 HOH A 35 335 39 HOH HOH . D 4 HOH A 36 336 17 HOH HOH . D 4 HOH A 37 337 26 HOH HOH . D 4 HOH A 38 338 35 HOH HOH . D 4 HOH A 39 339 2 HOH HOH . D 4 HOH A 40 340 20 HOH HOH . D 4 HOH A 41 341 47 HOH HOH . D 4 HOH A 42 342 5 HOH HOH . D 4 HOH A 43 343 15 HOH HOH . D 4 HOH A 44 344 3 HOH HOH . D 4 HOH A 45 345 36 HOH HOH . D 4 HOH A 46 346 49 HOH HOH . D 4 HOH A 47 347 56 HOH HOH . D 4 HOH A 48 348 16 HOH HOH . D 4 HOH A 49 349 99 HOH HOH . D 4 HOH A 50 350 58 HOH HOH . D 4 HOH A 51 351 34 HOH HOH . D 4 HOH A 52 352 78 HOH HOH . D 4 HOH A 53 353 13 HOH HOH . D 4 HOH A 54 354 10 HOH HOH . D 4 HOH A 55 355 44 HOH HOH . D 4 HOH A 56 356 37 HOH HOH . D 4 HOH A 57 357 81 HOH HOH . D 4 HOH A 58 358 54 HOH HOH . D 4 HOH A 59 359 76 HOH HOH . D 4 HOH A 60 360 31 HOH HOH . D 4 HOH A 61 361 22 HOH HOH . D 4 HOH A 62 362 82 HOH HOH . D 4 HOH A 63 363 88 HOH HOH . D 4 HOH A 64 364 53 HOH HOH . D 4 HOH A 65 365 46 HOH HOH . D 4 HOH A 66 366 11 HOH HOH . D 4 HOH A 67 367 77 HOH HOH . D 4 HOH A 68 368 62 HOH HOH . D 4 HOH A 69 369 65 HOH HOH . D 4 HOH A 70 370 64 HOH HOH . D 4 HOH A 71 371 67 HOH HOH . D 4 HOH A 72 372 57 HOH HOH . D 4 HOH A 73 373 69 HOH HOH . D 4 HOH A 74 374 7 HOH HOH . D 4 HOH A 75 375 59 HOH HOH . D 4 HOH A 76 376 90 HOH HOH . D 4 HOH A 77 377 72 HOH HOH . D 4 HOH A 78 378 96 HOH HOH . D 4 HOH A 79 379 92 HOH HOH . D 4 HOH A 80 380 73 HOH HOH . D 4 HOH A 81 381 75 HOH HOH . D 4 HOH A 82 382 95 HOH HOH . D 4 HOH A 83 383 98 HOH HOH . D 4 HOH A 84 384 60 HOH HOH . D 4 HOH A 85 385 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . B 2 -11.673 14.478 -1.538 1 45.86 ? C1 PGE 201 A 1 HETATM 2 O O1 PGE . . . B 2 -10.609 13.668 -1.112 1 43.45 ? O1 PGE 201 A 1 HETATM 3 C C2 PGE . . . B 2 -12.75 14.268 -0.45 1 47.04 ? C2 PGE 201 A 1 HETATM 4 O O2 PGE . . . B 2 -13.67 15.326 -0.587 1 49.28 ? O2 PGE 201 A 1 HETATM 5 C C3 PGE . . . B 2 -14.785 15.172 0.272 1 49.38 ? C3 PGE 201 A 1 HETATM 6 C C4 PGE . . . B 2 -14.458 16.032 1.508 1 48.58 ? C4 PGE 201 A 1 HETATM 7 O O4 PGE . . . B 2 -13.573 15.545 5.708 1 53.04 ? O4 PGE 201 A 1 HETATM 8 C C6 PGE . . . B 2 -13.882 14.969 4.468 1 51.17 ? C6 PGE 201 A 1 HETATM 9 C C5 PGE . . . B 2 -14.849 15.984 3.826 1 48.85 ? C5 PGE 201 A 1 HETATM 10 O O3 PGE . . . B 2 -15.201 15.454 2.565 1 47.9 ? O3 PGE 201 A 1 HETATM 11 H H1 PGE . . . B 2 -11.999 14.224 -2.416 1 55.44 ? H1 PGE 201 A 1 HETATM 12 H H12 PGE . . . B 2 -11.418 15.411 -1.612 1 55.44 ? H12 PGE 201 A 1 HETATM 13 H HO1 PGE . . . B 2 -10.046 13.628 -1.746 1 52.54 ? HO1 PGE 201 A 1 HETATM 14 H H2 PGE . . . B 2 -12.348 14.262 0.432 1 56.85 ? H2 PGE 201 A 1 HETATM 15 H H22 PGE . . . B 2 -13.183 13.407 -0.559 1 56.85 ? H22 PGE 201 A 1 HETATM 16 H H3 PGE . . . B 2 -15.608 15.465 -0.15 1 59.66 ? H3 PGE 201 A 1 HETATM 17 H H32 PGE . . . B 2 -14.924 14.244 0.519 1 59.66 ? H32 PGE 201 A 1 HETATM 18 H H4 PGE . . . B 2 -13.505 16.027 1.69 1 58.7 ? H4 PGE 201 A 1 HETATM 19 H H42 PGE . . . B 2 -14.701 16.959 1.358 1 58.7 ? H42 PGE 201 A 1 HETATM 20 H HO4 PGE . . . B 2 -13.702 14.957 6.306 1 64.05 ? HO4 PGE 201 A 1 HETATM 21 H H6 PGE . . . B 2 -13.093 14.833 3.92 1 61.81 ? H6 PGE 201 A 1 HETATM 22 H H62 PGE . . . B 2 -14.292 14.095 4.561 1 61.81 ? H62 PGE 201 A 1 HETATM 23 H H5 PGE . . . B 2 -15.625 16.112 4.395 1 59.02 ? H5 PGE 201 A 1 HETATM 24 H H52 PGE . . . B 2 -14.422 16.851 3.749 1 59.02 ? H52 PGE 201 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #