data_6Y4S
#
_model_server_result.job_id            ofZxKJmzU407qvG-qaCBmw 
_model_server_result.datetime_utc      '2024-11-05 01:20:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6y4s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    6Y4S 
#
_exptl.entry_id    6Y4S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.173 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TRIETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6Y4S 
_cell.length_a            113.15 
_cell.length_b            113.15 
_cell.length_c            326.14 
_cell.Z_PDB               54 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6Y4S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,I,J,S 1 1 
B,K,L,M,T 2 1 
C,N,O,P,Q,R,U 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 136 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf2 A SG CYS 26 A CYS 42 1_555 A SG CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 A SG CYS 108 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf4 A SG CYS 115 A CYS 136 1_555 A SG CYS 182 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf5 A SG CYS 147 A CYS 168 1_555 A SG CYS 161 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf6 A SG CYS 172 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf7 B SG CYS 7 B CYS 22 1_555 B SG CYS 136 B CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf8 B SG CYS 26 B CYS 42 1_555 B SG CYS 42 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf9 B SG CYS 108 B CYS 128 1_555 B SG CYS 210 B CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf10 B SG CYS 115 B CYS 136 1_555 B SG CYS 182 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf11 B SG CYS 147 B CYS 168 1_555 B SG CYS 161 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf12 B SG CYS 172 B CYS 191 1_555 B SG CYS 197 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf13 C SG CYS 7 C CYS 22 1_555 C SG CYS 136 C CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf14 C SG CYS 26 C CYS 42 1_555 C SG CYS 42 C CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf15 C SG CYS 108 C CYS 128 1_555 C SG CYS 210 C CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf16 C SG CYS 115 C CYS 136 1_555 C SG CYS 182 C CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf17 C SG CYS 147 C CYS 168 1_555 C SG CYS 161 C CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf18 C SG CYS 172 C CYS 191 1_555 C SG CYS 197 C CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
#
_chem_comp.formula           'C6 H14 O4' 
_chem_comp.formula_weight    150.173 
_chem_comp.id                PGE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TRIETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PGE sing 237 n n 
C1 C2 PGE sing 238 n n 
C1 H1 PGE sing 239 n n 
C1 H12 PGE sing 240 n n 
O1 HO1 PGE sing 241 n n 
C2 O2 PGE sing 242 n n 
C2 H2 PGE sing 243 n n 
C2 H22 PGE sing 244 n n 
O2 C3 PGE sing 245 n n 
C3 C4 PGE sing 246 n n 
C3 H3 PGE sing 247 n n 
C3 H32 PGE sing 248 n n 
C4 O3 PGE sing 249 n n 
C4 H4 PGE sing 250 n n 
C4 H42 PGE sing 251 n n 
O4 C6 PGE sing 252 n n 
O4 HO4 PGE sing 253 n n 
C6 C5 PGE sing 254 n n 
C6 H6 PGE sing 255 n n 
C6 H62 PGE sing 256 n n 
C5 O3 PGE sing 257 n n 
C5 H5 PGE sing 258 n n 
C5 H52 PGE sing 259 n n 
#
_atom_sites.entry_id                     6Y4S 
_atom_sites.fract_transf_matrix[1][1]    0.008838 
_atom_sites.fract_transf_matrix[1][2]    0.005103 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010205 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003066 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 PGE A 1 301 308 PGE PGE . 
E 3 SO4 A 1 302 3 SO4 SO4 . 
F 3 SO4 A 1 303 5 SO4 SO4 . 
G 3 SO4 A 1 304 8 SO4 SO4 . 
H 3 SO4 A 1 305 19 SO4 SO4 . 
I 3 SO4 A 1 306 20 SO4 SO4 . 
J 3 SO4 A 1 307 28 SO4 SO4 . 
K 3 SO4 B 1 301 4 SO4 SO4 . 
L 3 SO4 B 1 302 23 SO4 SO4 . 
M 3 SO4 B 1 303 27 SO4 SO4 . 
N 3 SO4 C 1 301 2 SO4 SO4 . 
O 3 SO4 C 1 302 9 SO4 SO4 . 
P 3 SO4 C 1 303 22 SO4 SO4 . 
Q 3 SO4 C 1 304 25 SO4 SO4 . 
R 3 SO4 C 1 305 31 SO4 SO4 . 
S 4 HOH A 1 401 132 HOH HOH . 
S 4 HOH A 2 402 29 HOH HOH . 
S 4 HOH A 3 403 170 HOH HOH . 
S 4 HOH A 4 404 28 HOH HOH . 
S 4 HOH A 5 405 177 HOH HOH . 
S 4 HOH A 6 406 1 HOH HOH . 
S 4 HOH A 7 407 131 HOH HOH . 
S 4 HOH A 8 408 122 HOH HOH . 
S 4 HOH A 9 409 173 HOH HOH . 
S 4 HOH A 10 410 9 HOH HOH . 
S 4 HOH A 11 411 3 HOH HOH . 
S 4 HOH A 12 412 182 HOH HOH . 
S 4 HOH A 13 413 15 HOH HOH . 
S 4 HOH A 14 414 148 HOH HOH . 
S 4 HOH A 15 415 133 HOH HOH . 
S 4 HOH A 16 416 158 HOH HOH . 
S 4 HOH A 17 417 100 HOH HOH . 
S 4 HOH A 18 418 14 HOH HOH . 
S 4 HOH A 19 419 42 HOH HOH . 
S 4 HOH A 20 420 166 HOH HOH . 
S 4 HOH A 21 421 171 HOH HOH . 
S 4 HOH A 22 422 40 HOH HOH . 
S 4 HOH A 23 423 136 HOH HOH . 
S 4 HOH A 24 424 20 HOH HOH . 
S 4 HOH A 25 425 16 HOH HOH . 
S 4 HOH A 26 426 185 HOH HOH . 
S 4 HOH A 27 427 145 HOH HOH . 
S 4 HOH A 28 428 184 HOH HOH . 
S 4 HOH A 29 429 146 HOH HOH . 
S 4 HOH A 30 430 154 HOH HOH . 
S 4 HOH A 31 431 153 HOH HOH . 
S 4 HOH A 32 432 186 HOH HOH . 
S 4 HOH A 33 433 141 HOH HOH . 
T 4 HOH B 1 401 137 HOH HOH . 
T 4 HOH B 2 402 7 HOH HOH . 
T 4 HOH B 3 403 123 HOH HOH . 
T 4 HOH B 4 404 27 HOH HOH . 
T 4 HOH B 5 405 172 HOH HOH . 
T 4 HOH B 6 406 124 HOH HOH . 
T 4 HOH B 7 407 174 HOH HOH . 
T 4 HOH B 8 408 187 HOH HOH . 
T 4 HOH B 9 409 164 HOH HOH . 
T 4 HOH B 10 410 163 HOH HOH . 
T 4 HOH B 11 411 18 HOH HOH . 
T 4 HOH B 12 412 159 HOH HOH . 
T 4 HOH B 13 413 140 HOH HOH . 
T 4 HOH B 14 414 192 HOH HOH . 
T 4 HOH B 15 415 4 HOH HOH . 
T 4 HOH B 16 416 167 HOH HOH . 
T 4 HOH B 17 417 169 HOH HOH . 
T 4 HOH B 18 418 162 HOH HOH . 
T 4 HOH B 19 419 143 HOH HOH . 
T 4 HOH B 20 420 161 HOH HOH . 
T 4 HOH B 21 421 179 HOH HOH . 
T 4 HOH B 22 422 31 HOH HOH . 
T 4 HOH B 23 423 183 HOH HOH . 
T 4 HOH B 24 424 165 HOH HOH . 
T 4 HOH B 25 425 150 HOH HOH . 
T 4 HOH B 26 426 126 HOH HOH . 
T 4 HOH B 27 427 17 HOH HOH . 
T 4 HOH B 28 428 156 HOH HOH . 
T 4 HOH B 29 429 147 HOH HOH . 
T 4 HOH B 30 430 175 HOH HOH . 
T 4 HOH B 31 431 176 HOH HOH . 
T 4 HOH B 32 432 178 HOH HOH . 
T 4 HOH B 33 433 127 HOH HOH . 
U 4 HOH C 1 401 142 HOH HOH . 
U 4 HOH C 2 402 191 HOH HOH . 
U 4 HOH C 3 403 190 HOH HOH . 
U 4 HOH C 4 404 116 HOH HOH . 
U 4 HOH C 5 405 160 HOH HOH . 
U 4 HOH C 6 406 139 HOH HOH . 
U 4 HOH C 7 407 157 HOH HOH . 
U 4 HOH C 8 408 151 HOH HOH . 
U 4 HOH C 9 409 180 HOH HOH . 
U 4 HOH C 10 410 144 HOH HOH . 
U 4 HOH C 11 411 129 HOH HOH . 
U 4 HOH C 12 412 181 HOH HOH . 
U 4 HOH C 13 413 188 HOH HOH . 
U 4 HOH C 14 414 189 HOH HOH . 
U 4 HOH C 15 415 155 HOH HOH . 
U 4 HOH C 16 416 23 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PGE . . . D 2 -25.23 2.274 29.737 1 73.8 ? C1 PGE 301 A 1 
HETATM 2 O O1 PGE . . . D 2 -26.12 1.187 29.941 1 73.08 ? O1 PGE 301 A 1 
HETATM 3 C C2 PGE . . . D 2 -25.84 3.59 30.131 1 74.86 ? C2 PGE 301 A 1 
HETATM 4 O O2 PGE . . . D 2 -26.893 3.927 29.24 1 77.2 ? O2 PGE 301 A 1 
HETATM 5 C C3 PGE . . . D 2 -27.235 5.309 29.25 1 76.93 ? C3 PGE 301 A 1 
HETATM 6 C C4 PGE . . . D 2 -28.696 5.481 28.945 1 75.63 ? C4 PGE 301 A 1 
HETATM 7 O O4 PGE . . . D 2 -28.112 7.069 32.068 1 71.34 ? O4 PGE 301 A 1 
HETATM 8 C C6 PGE . . . D 2 -29.46 7.388 31.766 1 72.18 ? C6 PGE 301 A 1 
HETATM 9 C C5 PGE . . . D 2 -29.996 6.57 30.621 1 73.81 ? C5 PGE 301 A 1 
HETATM 10 O O3 PGE . . . D 2 -29.176 6.716 29.464 1 74.86 ? O3 PGE 301 A 1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           339 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           10 
#