data_6Y6E # _model_server_result.job_id KMIZqO9upH2Ly-gGjxFoWA _model_server_result.datetime_utc '2024-10-10 02:25:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6y6e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6Y6E # _exptl.entry_id 6Y6E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.651 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ETHYL MERCURY ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6Y6E _cell.length_a 89.88 _cell.length_b 89.88 _cell.length_c 58.75 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Y6E _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall 'P 62' _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 114 A CYS 114 1_555 E HG EMC . A EMC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.21 ? metalc ? metalc2 A O ALA 119 A ALA 119 1_555 E HG EMC . A EMC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc3 A O LEU 220 A LEU 220 1_555 B HG EMC . A EMC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.011 ? metalc ? metalc4 A O CYS 223 A CYS 223 1_555 B HG EMC . A EMC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc5 A SG CYS 223 A CYS 223 1_555 B HG EMC . A EMC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc6 A O GLY 230 A GLY 230 1_555 D HG EMC . A EMC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? metalc ? metalc7 A SD MET 239 A MET 239 1_555 C HG EMC . A EMC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.152 ? metalc ? metalc8 A SG CYS 246 A CYS 246 1_555 C HG EMC . A EMC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.046 ? metalc ? metalc9 B HG EMC . A EMC 301 1_555 F O HOH . A HOH 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.017 ? metalc ? metalc10 C HG EMC . A EMC 302 1_555 F O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.083 ? metalc ? metalc11 C HG EMC . A EMC 302 1_555 F O HOH . A HOH 584 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc12 D HG EMC . A EMC 303 1_555 F O HOH . A HOH 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? # _chem_comp.formula 'C2 H5 Hg 1' _chem_comp.formula_weight 229.651 _chem_comp.id EMC _chem_comp.mon_nstd_flag . _chem_comp.name 'ETHYL MERCURY ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag HG C1 EMC sing 83 n n C1 C2 EMC sing 84 n n C1 H11 EMC sing 85 n n C1 H12 EMC sing 86 n n C2 H21 EMC sing 87 n n C2 H22 EMC sing 88 n n C2 H23 EMC sing 89 n n # _atom_sites.entry_id 6Y6E _atom_sites.fract_transf_matrix[1][1] 0.011126 _atom_sites.fract_transf_matrix[1][2] 0.006424 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012847 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017021 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EMC A 1 301 1 EMC EMC . C 2 EMC A 1 302 2 EMC EMC . D 2 EMC A 1 303 3 EMC EMC . E 2 EMC A 1 304 4 EMC EMC . F 3 HOH A 1 401 180 HOH HOH . F 3 HOH A 2 402 28 HOH HOH . F 3 HOH A 3 403 116 HOH HOH . F 3 HOH A 4 404 198 HOH HOH . F 3 HOH A 5 405 132 HOH HOH . F 3 HOH A 6 406 123 HOH HOH . F 3 HOH A 7 407 127 HOH HOH . F 3 HOH A 8 408 87 HOH HOH . F 3 HOH A 9 409 111 HOH HOH . F 3 HOH A 10 410 13 HOH HOH . F 3 HOH A 11 411 43 HOH HOH . F 3 HOH A 12 412 102 HOH HOH . F 3 HOH A 13 413 14 HOH HOH . F 3 HOH A 14 414 3 HOH HOH . F 3 HOH A 15 415 36 HOH HOH . F 3 HOH A 16 416 44 HOH HOH . F 3 HOH A 17 417 135 HOH HOH . F 3 HOH A 18 418 66 HOH HOH . F 3 HOH A 19 419 26 HOH HOH . F 3 HOH A 20 420 143 HOH HOH . F 3 HOH A 21 421 95 HOH HOH . F 3 HOH A 22 422 177 HOH HOH . F 3 HOH A 23 423 98 HOH HOH . F 3 HOH A 24 424 164 HOH HOH . F 3 HOH A 25 425 174 HOH HOH . F 3 HOH A 26 426 16 HOH HOH . F 3 HOH A 27 427 97 HOH HOH . F 3 HOH A 28 428 47 HOH HOH . F 3 HOH A 29 429 85 HOH HOH . F 3 HOH A 30 430 18 HOH HOH . F 3 HOH A 31 431 65 HOH HOH . F 3 HOH A 32 432 49 HOH HOH . F 3 HOH A 33 433 38 HOH HOH . F 3 HOH A 34 434 39 HOH HOH . F 3 HOH A 35 435 78 HOH HOH . F 3 HOH A 36 436 57 HOH HOH . F 3 HOH A 37 437 185 HOH HOH . F 3 HOH A 38 438 46 HOH HOH . F 3 HOH A 39 439 159 HOH HOH . F 3 HOH A 40 440 20 HOH HOH . F 3 HOH A 41 441 73 HOH HOH . F 3 HOH A 42 442 9 HOH HOH . F 3 HOH A 43 443 101 HOH HOH . F 3 HOH A 44 444 55 HOH HOH . F 3 HOH A 45 445 191 HOH HOH . F 3 HOH A 46 446 11 HOH HOH . F 3 HOH A 47 447 208 HOH HOH . F 3 HOH A 48 448 190 HOH HOH . F 3 HOH A 49 449 41 HOH HOH . F 3 HOH A 50 450 51 HOH HOH . F 3 HOH A 51 451 34 HOH HOH . F 3 HOH A 52 452 148 HOH HOH . F 3 HOH A 53 453 4 HOH HOH . F 3 HOH A 54 454 117 HOH HOH . F 3 HOH A 55 455 158 HOH HOH . F 3 HOH A 56 456 35 HOH HOH . F 3 HOH A 57 457 108 HOH HOH . F 3 HOH A 58 458 76 HOH HOH . F 3 HOH A 59 459 33 HOH HOH . F 3 HOH A 60 460 167 HOH HOH . F 3 HOH A 61 461 156 HOH HOH . F 3 HOH A 62 462 99 HOH HOH . F 3 HOH A 63 463 21 HOH HOH . F 3 HOH A 64 464 10 HOH HOH . F 3 HOH A 65 465 12 HOH HOH . F 3 HOH A 66 466 5 HOH HOH . F 3 HOH A 67 467 27 HOH HOH . F 3 HOH A 68 468 171 HOH HOH . F 3 HOH A 69 469 70 HOH HOH . F 3 HOH A 70 470 7 HOH HOH . F 3 HOH A 71 471 30 HOH HOH . F 3 HOH A 72 472 6 HOH HOH . F 3 HOH A 73 473 199 HOH HOH . F 3 HOH A 74 474 149 HOH HOH . F 3 HOH A 75 475 105 HOH HOH . F 3 HOH A 76 476 62 HOH HOH . F 3 HOH A 77 477 31 HOH HOH . F 3 HOH A 78 478 157 HOH HOH . F 3 HOH A 79 479 173 HOH HOH . F 3 HOH A 80 480 79 HOH HOH . F 3 HOH A 81 481 113 HOH HOH . F 3 HOH A 82 482 88 HOH HOH . F 3 HOH A 83 483 138 HOH HOH . F 3 HOH A 84 484 110 HOH HOH . F 3 HOH A 85 485 161 HOH HOH . F 3 HOH A 86 486 24 HOH HOH . F 3 HOH A 87 487 153 HOH HOH . F 3 HOH A 88 488 181 HOH HOH . F 3 HOH A 89 489 168 HOH HOH . F 3 HOH A 90 490 52 HOH HOH . F 3 HOH A 91 491 133 HOH HOH . F 3 HOH A 92 492 45 HOH HOH . F 3 HOH A 93 493 1 HOH HOH . F 3 HOH A 94 494 63 HOH HOH . F 3 HOH A 95 495 166 HOH HOH . F 3 HOH A 96 496 8 HOH HOH . F 3 HOH A 97 497 74 HOH HOH . F 3 HOH A 98 498 2 HOH HOH . F 3 HOH A 99 499 106 HOH HOH . F 3 HOH A 100 500 22 HOH HOH . F 3 HOH A 101 501 128 HOH HOH . F 3 HOH A 102 502 71 HOH HOH . F 3 HOH A 103 503 122 HOH HOH . F 3 HOH A 104 504 129 HOH HOH . F 3 HOH A 105 505 119 HOH HOH . F 3 HOH A 106 506 59 HOH HOH . F 3 HOH A 107 507 206 HOH HOH . F 3 HOH A 108 508 154 HOH HOH . F 3 HOH A 109 509 121 HOH HOH . F 3 HOH A 110 510 42 HOH HOH . F 3 HOH A 111 511 83 HOH HOH . F 3 HOH A 112 512 124 HOH HOH . F 3 HOH A 113 513 25 HOH HOH . F 3 HOH A 114 514 67 HOH HOH . F 3 HOH A 115 515 54 HOH HOH . F 3 HOH A 116 516 37 HOH HOH . F 3 HOH A 117 517 84 HOH HOH . F 3 HOH A 118 518 103 HOH HOH . F 3 HOH A 119 519 203 HOH HOH . F 3 HOH A 120 520 162 HOH HOH . F 3 HOH A 121 521 58 HOH HOH . F 3 HOH A 122 522 90 HOH HOH . F 3 HOH A 123 523 131 HOH HOH . F 3 HOH A 124 524 107 HOH HOH . F 3 HOH A 125 525 81 HOH HOH . F 3 HOH A 126 526 163 HOH HOH . F 3 HOH A 127 527 56 HOH HOH . F 3 HOH A 128 528 40 HOH HOH . F 3 HOH A 129 529 91 HOH HOH . F 3 HOH A 130 530 60 HOH HOH . F 3 HOH A 131 531 144 HOH HOH . F 3 HOH A 132 532 32 HOH HOH . F 3 HOH A 133 533 92 HOH HOH . F 3 HOH A 134 534 187 HOH HOH . F 3 HOH A 135 535 75 HOH HOH . F 3 HOH A 136 536 205 HOH HOH . F 3 HOH A 137 537 176 HOH HOH . F 3 HOH A 138 538 68 HOH HOH . F 3 HOH A 139 539 112 HOH HOH . F 3 HOH A 140 540 193 HOH HOH . F 3 HOH A 141 541 80 HOH HOH . F 3 HOH A 142 542 89 HOH HOH . F 3 HOH A 143 543 50 HOH HOH . F 3 HOH A 144 544 115 HOH HOH . F 3 HOH A 145 545 15 HOH HOH . F 3 HOH A 146 546 109 HOH HOH . F 3 HOH A 147 547 137 HOH HOH . F 3 HOH A 148 548 140 HOH HOH . F 3 HOH A 149 549 165 HOH HOH . F 3 HOH A 150 550 183 HOH HOH . F 3 HOH A 151 551 150 HOH HOH . F 3 HOH A 152 552 94 HOH HOH . F 3 HOH A 153 553 184 HOH HOH . F 3 HOH A 154 554 130 HOH HOH . F 3 HOH A 155 555 212 HOH HOH . F 3 HOH A 156 556 125 HOH HOH . F 3 HOH A 157 557 114 HOH HOH . F 3 HOH A 158 558 72 HOH HOH . F 3 HOH A 159 559 207 HOH HOH . F 3 HOH A 160 560 17 HOH HOH . F 3 HOH A 161 561 213 HOH HOH . F 3 HOH A 162 562 100 HOH HOH . F 3 HOH A 163 563 170 HOH HOH . F 3 HOH A 164 564 155 HOH HOH . F 3 HOH A 165 565 192 HOH HOH . F 3 HOH A 166 566 93 HOH HOH . F 3 HOH A 167 567 169 HOH HOH . F 3 HOH A 168 568 145 HOH HOH . F 3 HOH A 169 569 202 HOH HOH . F 3 HOH A 170 570 120 HOH HOH . F 3 HOH A 171 571 147 HOH HOH . F 3 HOH A 172 572 188 HOH HOH . F 3 HOH A 173 573 19 HOH HOH . F 3 HOH A 174 574 118 HOH HOH . F 3 HOH A 175 575 197 HOH HOH . F 3 HOH A 176 576 53 HOH HOH . F 3 HOH A 177 577 189 HOH HOH . F 3 HOH A 178 578 179 HOH HOH . F 3 HOH A 179 579 152 HOH HOH . F 3 HOH A 180 580 210 HOH HOH . F 3 HOH A 181 581 182 HOH HOH . F 3 HOH A 182 582 29 HOH HOH . F 3 HOH A 183 583 48 HOH HOH . F 3 HOH A 184 584 126 HOH HOH . F 3 HOH A 185 585 172 HOH HOH . F 3 HOH A 186 586 211 HOH HOH . F 3 HOH A 187 587 146 HOH HOH . F 3 HOH A 188 588 201 HOH HOH . F 3 HOH A 189 589 178 HOH HOH . F 3 HOH A 190 590 23 HOH HOH . F 3 HOH A 191 591 195 HOH HOH . F 3 HOH A 192 592 151 HOH HOH . F 3 HOH A 193 593 200 HOH HOH . F 3 HOH A 194 594 186 HOH HOH . F 3 HOH A 195 595 86 HOH HOH . F 3 HOH A 196 596 64 HOH HOH . F 3 HOH A 197 597 134 HOH HOH . F 3 HOH A 198 598 136 HOH HOH . F 3 HOH A 199 599 204 HOH HOH . F 3 HOH A 200 600 82 HOH HOH . F 3 HOH A 201 601 77 HOH HOH . F 3 HOH A 202 602 61 HOH HOH . F 3 HOH A 203 603 142 HOH HOH . F 3 HOH A 204 604 96 HOH HOH . F 3 HOH A 205 605 209 HOH HOH . F 3 HOH A 206 606 69 HOH HOH . F 3 HOH A 207 607 141 HOH HOH . F 3 HOH A 208 608 194 HOH HOH . F 3 HOH A 209 609 196 HOH HOH . F 3 HOH A 210 610 104 HOH HOH . F 3 HOH A 211 611 139 HOH HOH . F 3 HOH A 212 612 175 HOH HOH . F 3 HOH A 213 613 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 HG HG EMC . . . D 2 -42.318 15.426 29.227 0.22 53.43 ? HG EMC 303 A 1 HETATM 2 C C1 EMC . . . D 2 -44.011 15.624 30.345 0.22 53.43 ? C1 EMC 303 A 1 HETATM 3 C C2 EMC . . . D 2 -45.182 15.114 29.657 0.22 53.43 ? C2 EMC 303 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #