data_6Y7H # _model_server_result.job_id v8jsJd0rPpe8mlgsWUU12A _model_server_result.datetime_utc '2025-01-12 09:31:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6y7h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":704}' # _entry.id 6Y7H # _exptl.entry_id 6Y7H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.05 _cell.angle_gamma 90 _cell.entry_id 6Y7H _cell.length_a 58.61 _cell.length_b 38.31 _cell.length_c 60.94 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Y7H _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,I 1 1 B,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6Y7H _atom_sites.fract_transf_matrix[1][1] 0.017062 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005233 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017164 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 OFK A 1 700 700 OFK DRG . D 3 EDO A 1 701 701 EDO EDO . E 3 EDO A 1 702 702 EDO EDO . F 3 EDO A 1 703 703 EDO EDO . G 3 EDO A 1 704 704 EDO EDO . H 2 OFK B 1 700 700 OFK DRG . I 4 HOH A 1 801 152 HOH HOH . I 4 HOH A 2 802 153 HOH HOH . I 4 HOH A 3 803 67 HOH HOH . I 4 HOH A 4 804 172 HOH HOH . I 4 HOH A 5 805 92 HOH HOH . I 4 HOH A 6 806 40 HOH HOH . I 4 HOH A 7 807 41 HOH HOH . I 4 HOH A 8 808 11 HOH HOH . I 4 HOH A 9 809 43 HOH HOH . I 4 HOH A 10 810 7 HOH HOH . I 4 HOH A 11 811 54 HOH HOH . I 4 HOH A 12 812 64 HOH HOH . I 4 HOH A 13 813 29 HOH HOH . I 4 HOH A 14 814 3 HOH HOH . I 4 HOH A 15 815 37 HOH HOH . I 4 HOH A 16 816 128 HOH HOH . I 4 HOH A 17 817 204 HOH HOH . I 4 HOH A 18 818 35 HOH HOH . I 4 HOH A 19 819 8 HOH HOH . I 4 HOH A 20 820 110 HOH HOH . I 4 HOH A 21 821 73 HOH HOH . I 4 HOH A 22 822 25 HOH HOH . I 4 HOH A 23 823 147 HOH HOH . I 4 HOH A 24 824 51 HOH HOH . I 4 HOH A 25 825 9 HOH HOH . I 4 HOH A 26 826 42 HOH HOH . I 4 HOH A 27 827 193 HOH HOH . I 4 HOH A 28 828 80 HOH HOH . I 4 HOH A 29 829 187 HOH HOH . I 4 HOH A 30 830 52 HOH HOH . I 4 HOH A 31 831 5 HOH HOH . I 4 HOH A 32 832 155 HOH HOH . I 4 HOH A 33 833 118 HOH HOH . I 4 HOH A 34 834 1 HOH HOH . I 4 HOH A 35 835 27 HOH HOH . I 4 HOH A 36 836 94 HOH HOH . I 4 HOH A 37 837 20 HOH HOH . I 4 HOH A 38 838 85 HOH HOH . I 4 HOH A 39 839 156 HOH HOH . I 4 HOH A 40 840 202 HOH HOH . I 4 HOH A 41 841 39 HOH HOH . I 4 HOH A 42 842 23 HOH HOH . I 4 HOH A 43 843 189 HOH HOH . I 4 HOH A 44 844 31 HOH HOH . I 4 HOH A 45 845 57 HOH HOH . I 4 HOH A 46 846 15 HOH HOH . I 4 HOH A 47 847 95 HOH HOH . I 4 HOH A 48 848 13 HOH HOH . I 4 HOH A 49 849 19 HOH HOH . I 4 HOH A 50 850 21 HOH HOH . I 4 HOH A 51 851 12 HOH HOH . I 4 HOH A 52 852 56 HOH HOH . I 4 HOH A 53 853 124 HOH HOH . I 4 HOH A 54 854 199 HOH HOH . I 4 HOH A 55 855 22 HOH HOH . I 4 HOH A 56 856 4 HOH HOH . I 4 HOH A 57 857 70 HOH HOH . I 4 HOH A 58 858 182 HOH HOH . I 4 HOH A 59 859 125 HOH HOH . I 4 HOH A 60 860 91 HOH HOH . I 4 HOH A 61 861 122 HOH HOH . I 4 HOH A 62 862 115 HOH HOH . I 4 HOH A 63 863 61 HOH HOH . I 4 HOH A 64 864 6 HOH HOH . I 4 HOH A 65 865 108 HOH HOH . I 4 HOH A 66 866 75 HOH HOH . I 4 HOH A 67 867 126 HOH HOH . I 4 HOH A 68 868 45 HOH HOH . I 4 HOH A 69 869 10 HOH HOH . I 4 HOH A 70 870 72 HOH HOH . I 4 HOH A 71 871 32 HOH HOH . I 4 HOH A 72 872 120 HOH HOH . I 4 HOH A 73 873 24 HOH HOH . I 4 HOH A 74 874 102 HOH HOH . I 4 HOH A 75 875 18 HOH HOH . I 4 HOH A 76 876 195 HOH HOH . I 4 HOH A 77 877 97 HOH HOH . I 4 HOH A 78 878 17 HOH HOH . I 4 HOH A 79 879 180 HOH HOH . I 4 HOH A 80 880 114 HOH HOH . I 4 HOH A 81 881 47 HOH HOH . I 4 HOH A 82 882 100 HOH HOH . I 4 HOH A 83 883 38 HOH HOH . I 4 HOH A 84 884 82 HOH HOH . I 4 HOH A 85 885 129 HOH HOH . I 4 HOH A 86 886 123 HOH HOH . I 4 HOH A 87 887 109 HOH HOH . I 4 HOH A 88 888 119 HOH HOH . I 4 HOH A 89 889 60 HOH HOH . I 4 HOH A 90 890 177 HOH HOH . I 4 HOH A 91 891 200 HOH HOH . I 4 HOH A 92 892 203 HOH HOH . I 4 HOH A 93 893 148 HOH HOH . I 4 HOH A 94 894 63 HOH HOH . I 4 HOH A 95 895 79 HOH HOH . I 4 HOH A 96 896 133 HOH HOH . I 4 HOH A 97 897 48 HOH HOH . I 4 HOH A 98 898 121 HOH HOH . I 4 HOH A 99 899 84 HOH HOH . I 4 HOH A 100 900 179 HOH HOH . I 4 HOH A 101 901 158 HOH HOH . I 4 HOH A 102 902 181 HOH HOH . I 4 HOH A 103 903 106 HOH HOH . I 4 HOH A 104 904 132 HOH HOH . I 4 HOH A 105 905 107 HOH HOH . I 4 HOH A 106 906 130 HOH HOH . I 4 HOH A 107 907 170 HOH HOH . I 4 HOH A 108 908 141 HOH HOH . I 4 HOH A 109 909 192 HOH HOH . I 4 HOH A 110 910 34 HOH HOH . I 4 HOH A 111 911 36 HOH HOH . I 4 HOH A 112 912 169 HOH HOH . I 4 HOH A 113 913 112 HOH HOH . I 4 HOH A 114 914 163 HOH HOH . I 4 HOH A 115 915 186 HOH HOH . I 4 HOH A 116 916 185 HOH HOH . I 4 HOH A 117 917 183 HOH HOH . I 4 HOH A 118 918 104 HOH HOH . I 4 HOH A 119 919 157 HOH HOH . I 4 HOH A 120 920 159 HOH HOH . I 4 HOH A 121 921 160 HOH HOH . I 4 HOH A 122 922 89 HOH HOH . I 4 HOH A 123 923 176 HOH HOH . I 4 HOH A 124 924 164 HOH HOH . J 4 HOH B 1 801 201 HOH HOH . J 4 HOH B 2 802 62 HOH HOH . J 4 HOH B 3 803 142 HOH HOH . J 4 HOH B 4 804 78 HOH HOH . J 4 HOH B 5 805 146 HOH HOH . J 4 HOH B 6 806 46 HOH HOH . J 4 HOH B 7 807 81 HOH HOH . J 4 HOH B 8 808 175 HOH HOH . J 4 HOH B 9 809 173 HOH HOH . J 4 HOH B 10 810 74 HOH HOH . J 4 HOH B 11 811 58 HOH HOH . J 4 HOH B 12 812 93 HOH HOH . J 4 HOH B 13 813 96 HOH HOH . J 4 HOH B 14 814 83 HOH HOH . J 4 HOH B 15 815 188 HOH HOH . J 4 HOH B 16 816 26 HOH HOH . J 4 HOH B 17 817 76 HOH HOH . J 4 HOH B 18 818 137 HOH HOH . J 4 HOH B 19 819 127 HOH HOH . J 4 HOH B 20 820 191 HOH HOH . J 4 HOH B 21 821 14 HOH HOH . J 4 HOH B 22 822 28 HOH HOH . J 4 HOH B 23 823 99 HOH HOH . J 4 HOH B 24 824 139 HOH HOH . J 4 HOH B 25 825 194 HOH HOH . J 4 HOH B 26 826 144 HOH HOH . J 4 HOH B 27 827 143 HOH HOH . J 4 HOH B 28 828 136 HOH HOH . J 4 HOH B 29 829 69 HOH HOH . J 4 HOH B 30 830 87 HOH HOH . J 4 HOH B 31 831 90 HOH HOH . J 4 HOH B 32 832 171 HOH HOH . J 4 HOH B 33 833 66 HOH HOH . J 4 HOH B 34 834 135 HOH HOH . J 4 HOH B 35 835 59 HOH HOH . J 4 HOH B 36 836 16 HOH HOH . J 4 HOH B 37 837 68 HOH HOH . J 4 HOH B 38 838 55 HOH HOH . J 4 HOH B 39 839 198 HOH HOH . J 4 HOH B 40 840 190 HOH HOH . J 4 HOH B 41 841 86 HOH HOH . J 4 HOH B 42 842 65 HOH HOH . J 4 HOH B 43 843 101 HOH HOH . J 4 HOH B 44 844 178 HOH HOH . J 4 HOH B 45 845 168 HOH HOH . J 4 HOH B 46 846 145 HOH HOH . J 4 HOH B 47 847 205 HOH HOH . J 4 HOH B 48 848 77 HOH HOH . J 4 HOH B 49 849 49 HOH HOH . J 4 HOH B 50 850 71 HOH HOH . J 4 HOH B 51 851 184 HOH HOH . J 4 HOH B 52 852 98 HOH HOH . J 4 HOH B 53 853 162 HOH HOH . J 4 HOH B 54 854 44 HOH HOH . J 4 HOH B 55 855 174 HOH HOH . J 4 HOH B 56 856 131 HOH HOH . J 4 HOH B 57 857 150 HOH HOH . J 4 HOH B 58 858 113 HOH HOH . J 4 HOH B 59 859 149 HOH HOH . J 4 HOH B 60 860 167 HOH HOH . J 4 HOH B 61 861 88 HOH HOH . J 4 HOH B 62 862 197 HOH HOH . J 4 HOH B 63 863 140 HOH HOH . J 4 HOH B 64 864 154 HOH HOH . J 4 HOH B 65 865 161 HOH HOH . J 4 HOH B 66 866 165 HOH HOH . J 4 HOH B 67 867 196 HOH HOH . J 4 HOH B 68 868 117 HOH HOH . J 4 HOH B 69 869 134 HOH HOH . J 4 HOH B 70 870 111 HOH HOH . J 4 HOH B 71 871 116 HOH HOH . J 4 HOH B 72 872 138 HOH HOH . J 4 HOH B 73 873 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 3 -22.193 4.041 -0.527 1 48.5 ? C1 EDO 704 A 1 HETATM 2 O O1 EDO . . . G 3 -23.262 4.743 0.101 1 54.02 ? O1 EDO 704 A 1 HETATM 3 C C2 EDO . . . G 3 -22.136 4.532 -1.952 1 42.79 ? C2 EDO 704 A 1 HETATM 4 O O2 EDO . . . G 3 -20.899 5.212 -2.143 1 38.75 ? O2 EDO 704 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #