data_6Y8M # _model_server_result.job_id YBmtxt3mK_WaNUBYIlzMKw _model_server_result.datetime_utc '2024-12-27 02:02:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6y8m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6Y8M # _exptl.entry_id 6Y8M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 273.083 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-[(5-bromopyridin-2-yl)amino]-4-oxobutanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Y8M _cell.length_a 54.795 _cell.length_b 54.795 _cell.length_c 75.218 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Y8M _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall 'P 4cw' _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C9 H9 Br N2 O3' _chem_comp.formula_weight 273.083 _chem_comp.id SX2 _chem_comp.mon_nstd_flag . _chem_comp.name '4-[(5-bromopyridin-2-yl)amino]-4-oxobutanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C8 SX2 sing 294 n n C8 C7 SX2 doub 295 n y C8 C9 SX2 sing 296 n y C9 N2 SX2 doub 297 n y C9 H9 SX2 sing 298 n n N2 C5 SX2 sing 299 n y C7 C6 SX2 sing 300 n y C7 H7 SX2 sing 301 n n C6 C5 SX2 doub 302 n y C6 H6 SX2 sing 303 n n C5 N1 SX2 sing 304 n n C4 N1 SX2 sing 305 n n N1 HN1 SX2 sing 306 n n O3 C4 SX2 doub 307 n n C4 C3 SX2 sing 308 n n C3 C2 SX2 sing 309 n n C3 H3 SX2 sing 310 n n C3 H3A SX2 sing 311 n n C1 C2 SX2 sing 312 n n C2 H2 SX2 sing 313 n n C2 H2A SX2 sing 314 n n O1 C1 SX2 doub 315 n n C1 O2 SX2 sing 316 n n O2 HO2 SX2 sing 317 n n # _atom_sites.entry_id 6Y8M _atom_sites.fract_transf_matrix[1][1] 0.01825 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01825 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 161 SO4 SO4 . C 3 SX2 A 1 202 1 SX2 I06 . D 3 SX2 A 1 203 2 SX2 I06 . E 4 HOH A 1 301 179 HOH HOH . E 4 HOH A 2 302 16 HOH HOH . E 4 HOH A 3 303 178 HOH HOH . E 4 HOH A 4 304 12 HOH HOH . E 4 HOH A 5 305 64 HOH HOH . E 4 HOH A 6 306 76 HOH HOH . E 4 HOH A 7 307 105 HOH HOH . E 4 HOH A 8 308 1 HOH HOH . E 4 HOH A 9 309 35 HOH HOH . E 4 HOH A 10 310 19 HOH HOH . E 4 HOH A 11 311 61 HOH HOH . E 4 HOH A 12 312 3 HOH HOH . E 4 HOH A 13 313 80 HOH HOH . E 4 HOH A 14 314 8 HOH HOH . E 4 HOH A 15 315 22 HOH HOH . E 4 HOH A 16 316 177 HOH HOH . E 4 HOH A 17 317 37 HOH HOH . E 4 HOH A 18 318 175 HOH HOH . E 4 HOH A 19 319 7 HOH HOH . E 4 HOH A 20 320 25 HOH HOH . E 4 HOH A 21 321 74 HOH HOH . E 4 HOH A 22 322 44 HOH HOH . E 4 HOH A 23 323 65 HOH HOH . E 4 HOH A 24 324 85 HOH HOH . E 4 HOH A 25 325 84 HOH HOH . E 4 HOH A 26 326 2 HOH HOH . E 4 HOH A 27 327 24 HOH HOH . E 4 HOH A 28 328 108 HOH HOH . E 4 HOH A 29 329 123 HOH HOH . E 4 HOH A 30 330 51 HOH HOH . E 4 HOH A 31 331 39 HOH HOH . E 4 HOH A 32 332 32 HOH HOH . E 4 HOH A 33 333 176 HOH HOH . E 4 HOH A 34 334 135 HOH HOH . E 4 HOH A 35 335 83 HOH HOH . E 4 HOH A 36 336 15 HOH HOH . E 4 HOH A 37 337 4 HOH HOH . E 4 HOH A 38 338 42 HOH HOH . E 4 HOH A 39 339 60 HOH HOH . E 4 HOH A 40 340 174 HOH HOH . E 4 HOH A 41 341 103 HOH HOH . E 4 HOH A 42 342 78 HOH HOH . E 4 HOH A 43 343 31 HOH HOH . E 4 HOH A 44 344 107 HOH HOH . E 4 HOH A 45 345 29 HOH HOH . E 4 HOH A 46 346 100 HOH HOH . E 4 HOH A 47 347 72 HOH HOH . E 4 HOH A 48 348 30 HOH HOH . E 4 HOH A 49 349 45 HOH HOH . E 4 HOH A 50 350 67 HOH HOH . E 4 HOH A 51 351 27 HOH HOH . E 4 HOH A 52 352 133 HOH HOH . E 4 HOH A 53 353 95 HOH HOH . E 4 HOH A 54 354 131 HOH HOH . E 4 HOH A 55 355 81 HOH HOH . E 4 HOH A 56 356 180 HOH HOH . E 4 HOH A 57 357 49 HOH HOH . E 4 HOH A 58 358 21 HOH HOH . E 4 HOH A 59 359 18 HOH HOH . E 4 HOH A 60 360 69 HOH HOH . E 4 HOH A 61 361 34 HOH HOH . E 4 HOH A 62 362 40 HOH HOH . E 4 HOH A 63 363 79 HOH HOH . E 4 HOH A 64 364 9 HOH HOH . E 4 HOH A 65 365 23 HOH HOH . E 4 HOH A 66 366 46 HOH HOH . E 4 HOH A 67 367 17 HOH HOH . E 4 HOH A 68 368 77 HOH HOH . E 4 HOH A 69 369 82 HOH HOH . E 4 HOH A 70 370 26 HOH HOH . E 4 HOH A 71 371 68 HOH HOH . E 4 HOH A 72 372 93 HOH HOH . E 4 HOH A 73 373 57 HOH HOH . E 4 HOH A 74 374 153 HOH HOH . E 4 HOH A 75 375 10 HOH HOH . E 4 HOH A 76 376 62 HOH HOH . E 4 HOH A 77 377 55 HOH HOH . E 4 HOH A 78 378 38 HOH HOH . E 4 HOH A 79 379 66 HOH HOH . E 4 HOH A 80 380 161 HOH HOH . E 4 HOH A 81 381 33 HOH HOH . E 4 HOH A 82 382 71 HOH HOH . E 4 HOH A 83 383 87 HOH HOH . E 4 HOH A 84 384 163 HOH HOH . E 4 HOH A 85 385 109 HOH HOH . E 4 HOH A 86 386 47 HOH HOH . E 4 HOH A 87 387 164 HOH HOH . E 4 HOH A 88 388 20 HOH HOH . E 4 HOH A 89 389 111 HOH HOH . E 4 HOH A 90 390 162 HOH HOH . E 4 HOH A 91 391 158 HOH HOH . E 4 HOH A 92 392 106 HOH HOH . E 4 HOH A 93 393 146 HOH HOH . E 4 HOH A 94 394 59 HOH HOH . E 4 HOH A 95 395 160 HOH HOH . E 4 HOH A 96 396 116 HOH HOH . E 4 HOH A 97 397 148 HOH HOH . E 4 HOH A 98 398 159 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BR BR1 SX2 . . . C 3 12.466 27.204 -10.157 1 26.73 ? BR1 SX2 202 A 1 HETATM 2 C C8 SX2 . . . C 3 10.741 26.565 -9.68 1 26.59 ? C8 SX2 202 A 1 HETATM 3 C C9 SX2 . . . C 3 10.574 25.272 -9.224 1 27.71 ? C9 SX2 202 A 1 HETATM 4 N N2 SX2 . . . C 3 9.388 24.8 -8.814 1 25.86 ? N2 SX2 202 A 1 HETATM 5 C C7 SX2 . . . C 3 9.659 27.412 -9.738 1 29.48 ? C7 SX2 202 A 1 HETATM 6 C C6 SX2 . . . C 3 8.423 26.948 -9.322 1 28.09 ? C6 SX2 202 A 1 HETATM 7 C C5 SX2 . . . C 3 8.328 25.628 -8.864 1 29.05 ? C5 SX2 202 A 1 HETATM 8 N N1 SX2 . . . C 3 7.113 25.017 -8.509 1 27.89 ? N1 SX2 202 A 1 HETATM 9 C C4 SX2 . . . C 3 5.852 25.512 -8.605 1 35.24 ? C4 SX2 202 A 1 HETATM 10 O O3 SX2 . . . C 3 5.586 26.64 -9.011 1 31.37 ? O3 SX2 202 A 1 HETATM 11 C C3 SX2 . . . C 3 4.766 24.547 -8.191 1 32.06 ? C3 SX2 202 A 1 HETATM 12 C C2 SX2 . . . C 3 3.706 24.35 -9.271 1 38.65 ? C2 SX2 202 A 1 HETATM 13 C C1 SX2 . . . C 3 4.16 23.53 -10.448 1 37.79 ? C1 SX2 202 A 1 HETATM 14 O O2 SX2 . . . C 3 5.119 22.698 -10.18 1 34.97 ? O2 SX2 202 A 1 HETATM 15 O O1 SX2 . . . C 3 3.666 23.621 -11.549 1 42.45 ? O1 SX2 202 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #