data_6YAO # _model_server_result.job_id zYDfRCIUubtoCVKX07fIrA _model_server_result.datetime_utc '2024-11-25 06:44:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yao # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 6YAO # _exptl.entry_id 6YAO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.297 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2-(2-Hydroxy-ethyl)-phenyl]-3-(3-trifluoromethoxy-phenyl)-urea _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6YAO _cell.length_a 79.713 _cell.length_b 79.713 _cell.length_c 203.671 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YAO _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id ND1 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 100 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 100 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C8M _struct_conn.ptnr2_label_comp_id FAD _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id FAD _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.446 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H15 F3 N2 O3' _chem_comp.formula_weight 340.297 _chem_comp.id OJ2 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2-(2-Hydroxy-ethyl)-phenyl]-3-(3-trifluoromethoxy-phenyl)-urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-[2-(2-hydroxyethyl)phenyl]-3-[3-(trifluoromethyloxy)phenyl]urea # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FAE CAX OJ2 sing 346 n n OAR CAX OJ2 sing 347 n n OAR CAU OJ2 sing 348 n n CAX FAD OJ2 sing 349 n n CAX FAC OJ2 sing 350 n n CAU CAJ OJ2 doub 351 n y CAU CAM OJ2 sing 352 n y CAJ CAH OJ2 sing 353 n y CAM CAT OJ2 doub 354 n y CAH CAI OJ2 doub 355 n y CAG CAL OJ2 doub 356 n y CAG CAF OJ2 sing 357 n y OAA CAS OJ2 doub 358 n n CAL CAW OJ2 sing 359 n y CAT CAI OJ2 sing 360 n y CAT NAP OJ2 sing 361 n n CAF CAK OJ2 doub 362 n y CAS NAP OJ2 sing 363 n n CAS NAQ OJ2 sing 364 n n CAN OAB OJ2 sing 365 n n CAN CAO OJ2 sing 366 n n CAW NAQ OJ2 sing 367 n n CAW CAV OJ2 doub 368 n y CAK CAV OJ2 sing 369 n y CAV CAO OJ2 sing 370 n n CAM H1 OJ2 sing 371 n n CAJ H2 OJ2 sing 372 n n CAH H3 OJ2 sing 373 n n CAI H4 OJ2 sing 374 n n NAP H5 OJ2 sing 375 n n NAQ H6 OJ2 sing 376 n n CAL H7 OJ2 sing 377 n n CAG H8 OJ2 sing 378 n n CAF H9 OJ2 sing 379 n n CAK H10 OJ2 sing 380 n n CAO H11 OJ2 sing 381 n n CAO H12 OJ2 sing 382 n n CAN H13 OJ2 sing 383 n n CAN H14 OJ2 sing 384 n n OAB H15 OJ2 sing 385 n n # _atom_sites.entry_id 6YAO _atom_sites.fract_transf_matrix[1][1] 0.012545 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012545 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00491 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 601 1 FAD FAD . C 3 OJ2 A 1 602 1 OJ2 FHU . D 4 EDO A 1 603 1 EDO EDO . E 4 EDO A 1 604 2 EDO EDO . F 4 EDO A 1 605 3 EDO EDO . G 4 EDO A 1 606 4 EDO EDO . H 5 DMS A 1 607 1 DMS DMS . I 5 DMS A 1 608 2 DMS DMS . J 6 HOH A 1 701 130 HOH HOH . J 6 HOH A 2 702 37 HOH HOH . J 6 HOH A 3 703 18 HOH HOH . J 6 HOH A 4 704 40 HOH HOH . J 6 HOH A 5 705 81 HOH HOH . J 6 HOH A 6 706 34 HOH HOH . J 6 HOH A 7 707 66 HOH HOH . J 6 HOH A 8 708 135 HOH HOH . J 6 HOH A 9 709 38 HOH HOH . J 6 HOH A 10 710 27 HOH HOH . J 6 HOH A 11 711 69 HOH HOH . J 6 HOH A 12 712 95 HOH HOH . J 6 HOH A 13 713 35 HOH HOH . J 6 HOH A 14 714 29 HOH HOH . J 6 HOH A 15 715 43 HOH HOH . J 6 HOH A 16 716 52 HOH HOH . J 6 HOH A 17 717 55 HOH HOH . J 6 HOH A 18 718 58 HOH HOH . J 6 HOH A 19 719 102 HOH HOH . J 6 HOH A 20 720 75 HOH HOH . J 6 HOH A 21 721 28 HOH HOH . J 6 HOH A 22 722 4 HOH HOH . J 6 HOH A 23 723 79 HOH HOH . J 6 HOH A 24 724 85 HOH HOH . J 6 HOH A 25 725 159 HOH HOH . J 6 HOH A 26 726 152 HOH HOH . J 6 HOH A 27 727 94 HOH HOH . J 6 HOH A 28 728 121 HOH HOH . J 6 HOH A 29 729 168 HOH HOH . J 6 HOH A 30 730 10 HOH HOH . J 6 HOH A 31 731 53 HOH HOH . J 6 HOH A 32 732 86 HOH HOH . J 6 HOH A 33 733 57 HOH HOH . J 6 HOH A 34 734 172 HOH HOH . J 6 HOH A 35 735 71 HOH HOH . J 6 HOH A 36 736 31 HOH HOH . J 6 HOH A 37 737 19 HOH HOH . J 6 HOH A 38 738 48 HOH HOH . J 6 HOH A 39 739 90 HOH HOH . J 6 HOH A 40 740 173 HOH HOH . J 6 HOH A 41 741 49 HOH HOH . J 6 HOH A 42 742 47 HOH HOH . J 6 HOH A 43 743 21 HOH HOH . J 6 HOH A 44 744 145 HOH HOH . J 6 HOH A 45 745 97 HOH HOH . J 6 HOH A 46 746 84 HOH HOH . J 6 HOH A 47 747 104 HOH HOH . J 6 HOH A 48 748 24 HOH HOH . J 6 HOH A 49 749 169 HOH HOH . J 6 HOH A 50 750 175 HOH HOH . J 6 HOH A 51 751 131 HOH HOH . J 6 HOH A 52 752 36 HOH HOH . J 6 HOH A 53 753 82 HOH HOH . J 6 HOH A 54 754 50 HOH HOH . J 6 HOH A 55 755 20 HOH HOH . J 6 HOH A 56 756 132 HOH HOH . J 6 HOH A 57 757 153 HOH HOH . J 6 HOH A 58 758 155 HOH HOH . J 6 HOH A 59 759 141 HOH HOH . J 6 HOH A 60 760 45 HOH HOH . J 6 HOH A 61 761 1 HOH HOH . J 6 HOH A 62 762 89 HOH HOH . J 6 HOH A 63 763 13 HOH HOH . J 6 HOH A 64 764 16 HOH HOH . J 6 HOH A 65 765 126 HOH HOH . J 6 HOH A 66 766 15 HOH HOH . J 6 HOH A 67 767 115 HOH HOH . J 6 HOH A 68 768 44 HOH HOH . J 6 HOH A 69 769 108 HOH HOH . J 6 HOH A 70 770 92 HOH HOH . J 6 HOH A 71 771 119 HOH HOH . J 6 HOH A 72 772 137 HOH HOH . J 6 HOH A 73 773 101 HOH HOH . J 6 HOH A 74 774 70 HOH HOH . J 6 HOH A 75 775 178 HOH HOH . J 6 HOH A 76 776 17 HOH HOH . J 6 HOH A 77 777 56 HOH HOH . J 6 HOH A 78 778 68 HOH HOH . J 6 HOH A 79 779 91 HOH HOH . J 6 HOH A 80 780 3 HOH HOH . J 6 HOH A 81 781 39 HOH HOH . J 6 HOH A 82 782 77 HOH HOH . J 6 HOH A 83 783 25 HOH HOH . J 6 HOH A 84 784 67 HOH HOH . J 6 HOH A 85 785 41 HOH HOH . J 6 HOH A 86 786 103 HOH HOH . J 6 HOH A 87 787 6 HOH HOH . J 6 HOH A 88 788 109 HOH HOH . J 6 HOH A 89 789 167 HOH HOH . J 6 HOH A 90 790 88 HOH HOH . J 6 HOH A 91 791 106 HOH HOH . J 6 HOH A 92 792 60 HOH HOH . J 6 HOH A 93 793 117 HOH HOH . J 6 HOH A 94 794 74 HOH HOH . J 6 HOH A 95 795 98 HOH HOH . J 6 HOH A 96 796 33 HOH HOH . J 6 HOH A 97 797 22 HOH HOH . J 6 HOH A 98 798 73 HOH HOH . J 6 HOH A 99 799 161 HOH HOH . J 6 HOH A 100 800 14 HOH HOH . J 6 HOH A 101 801 151 HOH HOH . J 6 HOH A 102 802 65 HOH HOH . J 6 HOH A 103 803 59 HOH HOH . J 6 HOH A 104 804 76 HOH HOH . J 6 HOH A 105 805 139 HOH HOH . J 6 HOH A 106 806 32 HOH HOH . J 6 HOH A 107 807 99 HOH HOH . J 6 HOH A 108 808 127 HOH HOH . J 6 HOH A 109 809 107 HOH HOH . J 6 HOH A 110 810 5 HOH HOH . J 6 HOH A 111 811 8 HOH HOH . J 6 HOH A 112 812 9 HOH HOH . J 6 HOH A 113 813 51 HOH HOH . J 6 HOH A 114 814 143 HOH HOH . J 6 HOH A 115 815 80 HOH HOH . J 6 HOH A 116 816 12 HOH HOH . J 6 HOH A 117 817 87 HOH HOH . J 6 HOH A 118 818 23 HOH HOH . J 6 HOH A 119 819 83 HOH HOH . J 6 HOH A 120 820 42 HOH HOH . J 6 HOH A 121 821 154 HOH HOH . J 6 HOH A 122 822 26 HOH HOH . J 6 HOH A 123 823 54 HOH HOH . J 6 HOH A 124 824 136 HOH HOH . J 6 HOH A 125 825 176 HOH HOH . J 6 HOH A 126 826 165 HOH HOH . J 6 HOH A 127 827 7 HOH HOH . J 6 HOH A 128 828 46 HOH HOH . J 6 HOH A 129 829 148 HOH HOH . J 6 HOH A 130 830 96 HOH HOH . J 6 HOH A 131 831 138 HOH HOH . J 6 HOH A 132 832 147 HOH HOH . J 6 HOH A 133 833 11 HOH HOH . J 6 HOH A 134 834 174 HOH HOH . J 6 HOH A 135 835 93 HOH HOH . J 6 HOH A 136 836 122 HOH HOH . J 6 HOH A 137 837 61 HOH HOH . J 6 HOH A 138 838 134 HOH HOH . J 6 HOH A 139 839 120 HOH HOH . J 6 HOH A 140 840 62 HOH HOH . J 6 HOH A 141 841 129 HOH HOH . J 6 HOH A 142 842 124 HOH HOH . J 6 HOH A 143 843 142 HOH HOH . J 6 HOH A 144 844 110 HOH HOH . J 6 HOH A 145 845 72 HOH HOH . J 6 HOH A 146 846 30 HOH HOH . J 6 HOH A 147 847 105 HOH HOH . J 6 HOH A 148 848 166 HOH HOH . J 6 HOH A 149 849 199 HOH HOH . J 6 HOH A 150 850 2 HOH HOH . J 6 HOH A 151 851 162 HOH HOH . J 6 HOH A 152 852 189 HOH HOH . J 6 HOH A 153 853 63 HOH HOH . J 6 HOH A 154 854 186 HOH HOH . J 6 HOH A 155 855 203 HOH HOH . J 6 HOH A 156 856 128 HOH HOH . J 6 HOH A 157 857 160 HOH HOH . J 6 HOH A 158 858 125 HOH HOH . J 6 HOH A 159 859 111 HOH HOH . J 6 HOH A 160 860 207 HOH HOH . J 6 HOH A 161 861 140 HOH HOH . J 6 HOH A 162 862 204 HOH HOH . J 6 HOH A 163 863 187 HOH HOH . J 6 HOH A 164 864 157 HOH HOH . J 6 HOH A 165 865 198 HOH HOH . J 6 HOH A 166 866 158 HOH HOH . J 6 HOH A 167 867 171 HOH HOH . J 6 HOH A 168 868 150 HOH HOH . J 6 HOH A 169 869 78 HOH HOH . J 6 HOH A 170 870 192 HOH HOH . J 6 HOH A 171 871 146 HOH HOH . J 6 HOH A 172 872 196 HOH HOH . J 6 HOH A 173 873 206 HOH HOH . J 6 HOH A 174 874 193 HOH HOH . J 6 HOH A 175 875 170 HOH HOH . J 6 HOH A 176 876 191 HOH HOH . J 6 HOH A 177 877 133 HOH HOH . J 6 HOH A 178 878 156 HOH HOH . J 6 HOH A 179 879 149 HOH HOH . J 6 HOH A 180 880 188 HOH HOH . J 6 HOH A 181 881 202 HOH HOH . J 6 HOH A 182 882 190 HOH HOH . J 6 HOH A 183 883 194 HOH HOH . J 6 HOH A 184 884 195 HOH HOH . J 6 HOH A 185 885 114 HOH HOH . J 6 HOH A 186 886 164 HOH HOH . J 6 HOH A 187 887 200 HOH HOH . J 6 HOH A 188 888 179 HOH HOH . J 6 HOH A 189 889 177 HOH HOH . J 6 HOH A 190 890 144 HOH HOH . J 6 HOH A 191 891 205 HOH HOH . J 6 HOH A 192 892 64 HOH HOH . J 6 HOH A 193 893 201 HOH HOH . J 6 HOH A 194 894 181 HOH HOH . J 6 HOH A 195 895 113 HOH HOH . J 6 HOH A 196 896 180 HOH HOH . J 6 HOH A 197 897 197 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FAC OJ2 . . . C 3 23.816 -11.601 13.833 1 64.34 ? FAC OJ2 602 A 1 HETATM 2 C CAX OJ2 . . . C 3 23.072 -12.235 12.91 1 62.98 ? CAX OJ2 602 A 1 HETATM 3 F FAD OJ2 . . . C 3 22.368 -13.243 13.446 1 67.08 ? FAD OJ2 602 A 1 HETATM 4 F FAE OJ2 . . . C 3 23.881 -12.692 11.95 1 63.24 ? FAE OJ2 602 A 1 HETATM 5 O OAR OJ2 . . . C 3 22.163 -11.364 12.305 1 55.93 ? OAR OJ2 602 A 1 HETATM 6 C CAU OJ2 . . . C 3 21.225 -10.692 13.115 1 48.79 ? CAU OJ2 602 A 1 HETATM 7 C CAM OJ2 . . . C 3 21.546 -9.441 13.645 1 43.16 ? CAM OJ2 602 A 1 HETATM 8 C CAJ OJ2 . . . C 3 19.92 -11.169 13.215 1 45.4 ? CAJ OJ2 602 A 1 HETATM 9 C CAH OJ2 . . . C 3 18.956 -10.411 13.863 1 42.82 ? CAH OJ2 602 A 1 HETATM 10 C CAI OJ2 . . . C 3 19.294 -9.169 14.407 1 43.07 ? CAI OJ2 602 A 1 HETATM 11 C CAT OJ2 . . . C 3 20.617 -8.725 14.392 1 41.38 ? CAT OJ2 602 A 1 HETATM 12 N NAP OJ2 . . . C 3 20.857 -7.404 14.83 1 37.97 ? NAP OJ2 602 A 1 HETATM 13 C CAS OJ2 . . . C 3 22.028 -6.636 14.662 1 38.72 ? CAS OJ2 602 A 1 HETATM 14 O OAA OJ2 . . . C 3 23.071 -7.11 14.246 1 44.7 ? OAA OJ2 602 A 1 HETATM 15 N NAQ OJ2 . . . C 3 21.892 -5.266 14.991 1 36.59 ? NAQ OJ2 602 A 1 HETATM 16 C CAW OJ2 . . . C 3 22.861 -4.226 14.862 1 36.91 ? CAW OJ2 602 A 1 HETATM 17 C CAL OJ2 . . . C 3 24.116 -4.421 14.256 1 35.02 ? CAL OJ2 602 A 1 HETATM 18 C CAG OJ2 . . . C 3 25.012 -3.356 14.118 1 35.07 ? CAG OJ2 602 A 1 HETATM 19 C CAF OJ2 . . . C 3 24.631 -2.074 14.499 1 32.25 ? CAF OJ2 602 A 1 HETATM 20 C CAK OJ2 . . . C 3 23.352 -1.87 15.023 1 35.51 ? CAK OJ2 602 A 1 HETATM 21 C CAV OJ2 . . . C 3 22.444 -2.921 15.155 1 36.74 ? CAV OJ2 602 A 1 HETATM 22 C CAO OJ2 . . . C 3 21.055 -2.647 15.73 1 39.71 ? CAO OJ2 602 A 1 HETATM 23 C CAN OJ2 . . . C 3 19.959 -2.806 14.696 1 39.61 ? CAN OJ2 602 A 1 HETATM 24 O OAB OJ2 . . . C 3 18.743 -3.051 15.375 1 40.8 ? OAB OJ2 602 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 39 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 24 #