data_6YAW
#
_model_server_result.job_id            CppWi9K-takva8ypmZIQZQ 
_model_server_result.datetime_utc      '2025-01-10 20:04:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6yaw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    6YAW 
#
_exptl.entry_id    6YAW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              439.483 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2~{S})-2-azanyl-5-[[(2~{R})-1-(2-hydroxy-2-oxoethylamino)-1-oxidanylidene-3-[(1~{R})-3-oxidanylidene-1-phenyl-propyl]sulfanyl-propan-2-yl]amino]-5-oxidanylidene-pentanoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.113 
_cell.angle_gamma         90 
_cell.entry_id            6YAW 
_cell.length_a            99.783 
_cell.length_b            94.199 
_cell.length_c            51.533 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YAW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
_chem_comp.formula           'C19 H25 N3 O7 S' 
_chem_comp.formula_weight    439.483 
_chem_comp.id                P9H 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2~{S})-2-azanyl-5-[[(2~{R})-1-(2-hydroxy-2-oxoethylamino)-1-oxidanylidene-3-[(1~{R})-3-oxidanylidene-1-phenyl-propyl]sulfanyl-propan-2-yl]amino]-5-oxidanylidene-pentanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Glutathionyl-cinnamaldehyde 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C15 P9H doub 250 n n 
O2 C15 P9H sing 251 n n 
C15 C14 P9H sing 252 n n 
C14 N1 P9H sing 253 n n 
C14 C13 P9H sing 254 n n 
C12 C13 P9H sing 255 n n 
C12 C11 P9H sing 256 n n 
N C11 P9H sing 257 n n 
N C10 P9H sing 258 n n 
O4 C16 P9H doub 259 n n 
S C9 P9H sing 260 n n 
S C2 P9H sing 261 n n 
C9 C10 P9H sing 262 n n 
C11 O3 P9H doub 263 n n 
C7 C8 P9H doub 264 n y 
C7 C6 P9H sing 265 n y 
C10 C16 P9H sing 266 n n 
C8 C3 P9H sing 267 n y 
C16 N2 P9H sing 268 n n 
C6 C5 P9H doub 269 n y 
C3 C2 P9H sing 270 n n 
C3 C4 P9H doub 271 n y 
C2 C1 P9H sing 272 n n 
C5 C4 P9H sing 273 n y 
N2 C17 P9H sing 274 n n 
C1 C P9H sing 275 n n 
C17 C18 P9H sing 276 n n 
C O P9H doub 277 n n 
C18 O6 P9H doub 278 n n 
C18 O5 P9H sing 279 n n 
N1 H1 P9H sing 280 n n 
N1 H2 P9H sing 281 n n 
C4 H4 P9H sing 282 n n 
C5 H5 P9H sing 283 n n 
C6 H6 P9H sing 284 n n 
C7 H7 P9H sing 285 n n 
C8 H8 P9H sing 286 n n 
C10 H9 P9H sing 287 n n 
C13 H10 P9H sing 288 n n 
C13 H11 P9H sing 289 n n 
C17 H12 P9H sing 290 n n 
C17 H13 P9H sing 291 n n 
N H14 P9H sing 292 n n 
C H15 P9H sing 293 n n 
C1 H16 P9H sing 294 n n 
C1 H17 P9H sing 295 n n 
C12 H18 P9H sing 296 n n 
C12 H19 P9H sing 297 n n 
C14 H20 P9H sing 298 n n 
C2 H21 P9H sing 299 n n 
C9 H22 P9H sing 300 n n 
C9 H23 P9H sing 301 n n 
N2 H24 P9H sing 302 n n 
O2 H25 P9H sing 303 n n 
O5 H26 P9H sing 304 n n 
#
_atom_sites.entry_id                     6YAW 
_atom_sites.fract_transf_matrix[1][1]    0.010022 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000545 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010616 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019434 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 P9H A 1 301 301 P9H LIG . 
D 3 GOL A 1 302 401 GOL GOL . 
E 3 GOL B 1 501 501 GOL GOL . 
F 2 P9H B 1 502 301 P9H LIG . 
G 4 HOH A 1 401 1 HOH HOH . 
G 4 HOH A 2 402 7 HOH HOH . 
G 4 HOH A 3 403 54 HOH HOH . 
G 4 HOH A 4 404 10 HOH HOH . 
G 4 HOH A 5 405 55 HOH HOH . 
G 4 HOH A 6 406 100 HOH HOH . 
G 4 HOH A 7 407 114 HOH HOH . 
G 4 HOH A 8 408 80 HOH HOH . 
G 4 HOH A 9 409 29 HOH HOH . 
G 4 HOH A 10 410 87 HOH HOH . 
G 4 HOH A 11 411 24 HOH HOH . 
G 4 HOH A 12 412 51 HOH HOH . 
G 4 HOH A 13 413 131 HOH HOH . 
G 4 HOH A 14 414 4 HOH HOH . 
G 4 HOH A 15 415 64 HOH HOH . 
G 4 HOH A 16 416 59 HOH HOH . 
G 4 HOH A 17 417 92 HOH HOH . 
G 4 HOH A 18 418 107 HOH HOH . 
G 4 HOH A 19 419 5 HOH HOH . 
G 4 HOH A 20 420 6 HOH HOH . 
G 4 HOH A 21 421 8 HOH HOH . 
G 4 HOH A 22 422 15 HOH HOH . 
G 4 HOH A 23 423 81 HOH HOH . 
G 4 HOH A 24 424 120 HOH HOH . 
G 4 HOH A 25 425 86 HOH HOH . 
G 4 HOH A 26 426 75 HOH HOH . 
G 4 HOH A 27 427 103 HOH HOH . 
G 4 HOH A 28 428 126 HOH HOH . 
G 4 HOH A 29 429 138 HOH HOH . 
G 4 HOH A 30 430 99 HOH HOH . 
G 4 HOH A 31 431 34 HOH HOH . 
G 4 HOH A 32 432 118 HOH HOH . 
G 4 HOH A 33 433 116 HOH HOH . 
G 4 HOH A 34 434 106 HOH HOH . 
G 4 HOH A 35 435 28 HOH HOH . 
G 4 HOH A 36 436 133 HOH HOH . 
G 4 HOH A 37 437 3 HOH HOH . 
G 4 HOH A 38 438 130 HOH HOH . 
G 4 HOH A 39 439 43 HOH HOH . 
G 4 HOH A 40 440 38 HOH HOH . 
G 4 HOH A 41 441 77 HOH HOH . 
G 4 HOH A 42 442 128 HOH HOH . 
G 4 HOH A 43 443 104 HOH HOH . 
G 4 HOH A 44 444 137 HOH HOH . 
G 4 HOH A 45 445 124 HOH HOH . 
G 4 HOH A 46 446 95 HOH HOH . 
G 4 HOH A 47 447 18 HOH HOH . 
G 4 HOH A 48 448 47 HOH HOH . 
G 4 HOH A 49 449 139 HOH HOH . 
G 4 HOH A 50 450 20 HOH HOH . 
G 4 HOH A 51 451 79 HOH HOH . 
G 4 HOH A 52 452 70 HOH HOH . 
G 4 HOH A 53 453 13 HOH HOH . 
G 4 HOH A 54 454 57 HOH HOH . 
G 4 HOH A 55 455 115 HOH HOH . 
G 4 HOH A 56 456 53 HOH HOH . 
G 4 HOH A 57 457 27 HOH HOH . 
G 4 HOH A 58 458 108 HOH HOH . 
G 4 HOH A 59 459 94 HOH HOH . 
G 4 HOH A 60 460 134 HOH HOH . 
G 4 HOH A 61 461 12 HOH HOH . 
G 4 HOH A 62 462 32 HOH HOH . 
G 4 HOH A 63 463 39 HOH HOH . 
G 4 HOH A 64 464 140 HOH HOH . 
G 4 HOH A 65 465 63 HOH HOH . 
G 4 HOH A 66 466 127 HOH HOH . 
G 4 HOH A 67 467 141 HOH HOH . 
G 4 HOH A 68 468 45 HOH HOH . 
G 4 HOH A 69 469 19 HOH HOH . 
G 4 HOH A 70 470 111 HOH HOH . 
G 4 HOH A 71 471 101 HOH HOH . 
G 4 HOH A 72 472 112 HOH HOH . 
H 4 HOH B 1 601 14 HOH HOH . 
H 4 HOH B 2 602 65 HOH HOH . 
H 4 HOH B 3 603 72 HOH HOH . 
H 4 HOH B 4 604 56 HOH HOH . 
H 4 HOH B 5 605 49 HOH HOH . 
H 4 HOH B 6 606 25 HOH HOH . 
H 4 HOH B 7 607 122 HOH HOH . 
H 4 HOH B 8 608 2 HOH HOH . 
H 4 HOH B 9 609 85 HOH HOH . 
H 4 HOH B 10 610 58 HOH HOH . 
H 4 HOH B 11 611 110 HOH HOH . 
H 4 HOH B 12 612 69 HOH HOH . 
H 4 HOH B 13 613 129 HOH HOH . 
H 4 HOH B 14 614 41 HOH HOH . 
H 4 HOH B 15 615 21 HOH HOH . 
H 4 HOH B 16 616 31 HOH HOH . 
H 4 HOH B 17 617 52 HOH HOH . 
H 4 HOH B 18 618 98 HOH HOH . 
H 4 HOH B 19 619 67 HOH HOH . 
H 4 HOH B 20 620 17 HOH HOH . 
H 4 HOH B 21 621 62 HOH HOH . 
H 4 HOH B 22 622 35 HOH HOH . 
H 4 HOH B 23 623 60 HOH HOH . 
H 4 HOH B 24 624 50 HOH HOH . 
H 4 HOH B 25 625 44 HOH HOH . 
H 4 HOH B 26 626 88 HOH HOH . 
H 4 HOH B 27 627 84 HOH HOH . 
H 4 HOH B 28 628 82 HOH HOH . 
H 4 HOH B 29 629 46 HOH HOH . 
H 4 HOH B 30 630 93 HOH HOH . 
H 4 HOH B 31 631 68 HOH HOH . 
H 4 HOH B 32 632 16 HOH HOH . 
H 4 HOH B 33 633 9 HOH HOH . 
H 4 HOH B 34 634 113 HOH HOH . 
H 4 HOH B 35 635 117 HOH HOH . 
H 4 HOH B 36 636 109 HOH HOH . 
H 4 HOH B 37 637 136 HOH HOH . 
H 4 HOH B 38 638 83 HOH HOH . 
H 4 HOH B 39 639 26 HOH HOH . 
H 4 HOH B 40 640 66 HOH HOH . 
H 4 HOH B 41 641 33 HOH HOH . 
H 4 HOH B 42 642 61 HOH HOH . 
H 4 HOH B 43 643 89 HOH HOH . 
H 4 HOH B 44 644 97 HOH HOH . 
H 4 HOH B 45 645 105 HOH HOH . 
H 4 HOH B 46 646 78 HOH HOH . 
H 4 HOH B 47 647 121 HOH HOH . 
H 4 HOH B 48 648 102 HOH HOH . 
H 4 HOH B 49 649 96 HOH HOH . 
H 4 HOH B 50 650 91 HOH HOH . 
H 4 HOH B 51 651 74 HOH HOH . 
H 4 HOH B 52 652 42 HOH HOH . 
H 4 HOH B 53 653 11 HOH HOH . 
H 4 HOH B 54 654 90 HOH HOH . 
H 4 HOH B 55 655 132 HOH HOH . 
H 4 HOH B 56 656 23 HOH HOH . 
H 4 HOH B 57 657 48 HOH HOH . 
H 4 HOH B 58 658 135 HOH HOH . 
H 4 HOH B 59 659 123 HOH HOH . 
H 4 HOH B 60 660 36 HOH HOH . 
H 4 HOH B 61 661 73 HOH HOH . 
H 4 HOH B 62 662 40 HOH HOH . 
H 4 HOH B 63 663 119 HOH HOH . 
H 4 HOH B 64 664 71 HOH HOH . 
H 4 HOH B 65 665 76 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 P9H . . . C 2 26.122 6.451 12.916 1 35.28 ? N1 P9H 301 A 1 
HETATM 2 C C4 P9H . . . C 2 35.917 6.604 16.068 1 63.41 ? C4 P9H 301 A 1 
HETATM 3 C C5 P9H . . . C 2 36.949 5.696 15.932 1 60.82 ? C5 P9H 301 A 1 
HETATM 4 C C6 P9H . . . C 2 38.028 5.988 15.136 1 61.37 ? C6 P9H 301 A 1 
HETATM 5 C C7 P9H . . . C 2 38.081 7.183 14.479 1 58.95 ? C7 P9H 301 A 1 
HETATM 6 C C8 P9H . . . C 2 37.051 8.096 14.611 1 63.63 ? C8 P9H 301 A 1 
HETATM 7 C C10 P9H . . . C 2 31.785 10.894 14.594 1 48.7 ? C10 P9H 301 A 1 
HETATM 8 C C13 P9H . . . C 2 27.992 7.908 13.492 1 37.15 ? C13 P9H 301 A 1 
HETATM 9 C C15 P9H . . . C 2 27.632 7.179 11.092 1 38.01 ? C15 P9H 301 A 1 
HETATM 10 C C17 P9H . . . C 2 31 14.096 16.453 1 44.6 ? C17 P9H 301 A 1 
HETATM 11 N N P9H . . . C 2 30.765 10.349 13.727 1 42.56 ? N P9H 301 A 1 
HETATM 12 C C P9H . . . C 2 36.406 9.848 17.109 1 62.02 ? C P9H 301 A 1 
HETATM 13 O O P9H . . . C 2 36.423 10.051 18.267 1 65.26 ? O P9H 301 A 1 
HETATM 14 C C1 P9H . . . C 2 35.261 10.111 16.194 1 57.63 ? C1 P9H 301 A 1 
HETATM 15 C C11 P9H . . . C 2 29.821 9.519 14.162 1 44.42 ? C11 P9H 301 A 1 
HETATM 16 C C12 P9H . . . C 2 28.74 9.181 13.168 1 41.89 ? C12 P9H 301 A 1 
HETATM 17 C C14 P9H . . . C 2 26.956 7.532 12.421 1 39.7 ? C14 P9H 301 A 1 
HETATM 18 C C16 P9H . . . C 2 31.454 12.364 14.839 1 48.16 ? C16 P9H 301 A 1 
HETATM 19 C C18 P9H . . . C 2 29.762 14.171 17.3 1 50.73 ? C18 P9H 301 A 1 
HETATM 20 C C2 P9H . . . C 2 34.813 8.81 15.564 1 58.12 ? C2 P9H 301 A 1 
HETATM 21 C C3 P9H . . . C 2 35.951 7.818 15.408 1 62 ? C3 P9H 301 A 1 
HETATM 22 C C9 P9H . . . C 2 33.199 10.762 14.012 1 46.65 ? C9 P9H 301 A 1 
HETATM 23 N N2 P9H . . . C 2 31.369 12.751 16.096 1 46.74 ? N2 P9H 301 A 1 
HETATM 24 O O1 P9H . . . C 2 27.876 7.959 10.262 1 36.97 ? O1 P9H 301 A 1 
HETATM 25 O O2 P9H . . . C 2 27.904 5.977 10.991 1 37.89 ? O2 P9H 301 A 1 
HETATM 26 O O3 P9H . . . C 2 29.838 9.029 15.271 1 38.45 ? O3 P9H 301 A 1 
HETATM 27 O O4 P9H . . . C 2 31.263 13.126 13.912 1 46.76 ? O4 P9H 301 A 1 
HETATM 28 O O5 P9H . . . C 2 29.344 15.185 17.701 1 53.74 ? O5 P9H 301 A 1 
HETATM 29 O O6 P9H . . . C 2 29.219 13.062 17.582 1 49.29 ? O6 P9H 301 A 1 
HETATM 30 S S P9H . . . C 2 33.929 9.105 13.968 1 48.51 ? S P9H 301 A 1 
#
_model_server_stats.io_time_ms              52 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           30 
#