data_6YG5 # _model_server_result.job_id kcNZJ6gN5NSr5Hb5fEnZ7A _model_server_result.datetime_utc '2024-11-17 10:35:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yg5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6YG5 # _exptl.entry_id 6YG5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 381.433 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-({4-[(5-cyclopropyl-1H-pyrazol-3-yl)amino]quinazolin-2-yl}amino)phenyl]acetonitrile' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6YG5 _cell.length_a 59.66 _cell.length_b 68.031 _cell.length_c 84.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YG5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 103 A THR 217 1_555 A N CSO 104 A CSO 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale2 A C CSO 104 A CSO 218 1_555 A N ALA 105 A ALA 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale3 A C LEU 161 A LEU 275 1_555 A N CSO 162 A CSO 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale4 A C CSO 162 A CSO 276 1_555 A N ASP 163 A ASP 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? # _chem_comp.formula 'C22 H19 N7' _chem_comp.formula_weight 381.433 _chem_comp.id IHH _chem_comp.mon_nstd_flag . _chem_comp.name '[4-({4-[(5-cyclopropyl-1H-pyrazol-3-yl)amino]quinazolin-2-yl}amino)phenyl]acetonitrile' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IHH doub 166 n y C1 C4 IHH sing 167 n y C1 H1 IHH sing 168 n n C2 C3 IHH sing 169 n y C2 H2 IHH sing 170 n n C3 C6 IHH doub 171 n y C3 H3 IHH sing 172 n n C4 C5 IHH doub 173 n y C4 H4 IHH sing 174 n n C5 C6 IHH sing 175 n y C5 C10 IHH sing 176 n y C6 N7 IHH sing 177 n y C8 N9 IHH sing 178 n y C8 N7 IHH doub 179 n y C8 N11 IHH sing 180 n n C10 N21 IHH sing 181 n n C10 N9 IHH doub 182 n y C12 C13 IHH doub 183 n y C12 N11 IHH sing 184 n n C12 C17 IHH sing 185 n y C13 C14 IHH sing 186 n y C13 H13 IHH sing 187 n n C14 C15 IHH doub 188 n y C14 H14 IHH sing 189 n n C15 C16 IHH sing 190 n y C15 C18 IHH sing 191 n n C28 C29 IHH sing 192 n n C28 C27 IHH sing 193 n n C28 H28 IHH sing 194 n n C28 H28A IHH sing 195 n n C29 C27 IHH sing 196 n n C29 H29 IHH sing 197 n n C29 H29A IHH sing 198 n n C27 C24 IHH sing 199 n n C27 H27 IHH sing 200 n n C24 C23 IHH doub 201 n y C24 N25 IHH sing 202 n y C23 C22 IHH sing 203 n y C23 H23 IHH sing 204 n n N25 N26 IHH sing 205 n y N26 C22 IHH doub 206 n y C22 N21 IHH sing 207 n n N11 HN11 IHH sing 208 n n C17 C16 IHH doub 209 n y C17 H17 IHH sing 210 n n C16 H16 IHH sing 211 n n C18 C19 IHH sing 212 n n C18 H18 IHH sing 213 n n C18 H18A IHH sing 214 n n C19 N20 IHH trip 215 n n N25 H181 IHH sing 216 n n N21 H19 IHH sing 217 n n # _atom_sites.entry_id 6YG5 _atom_sites.fract_transf_matrix[1][1] 0.016762 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014699 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IHH A 1 501 1 IHH XXX . C 3 HOH A 1 601 10 HOH HOH . C 3 HOH A 2 602 6 HOH HOH . C 3 HOH A 3 603 3 HOH HOH . C 3 HOH A 4 604 5 HOH HOH . C 3 HOH A 5 605 2 HOH HOH . C 3 HOH A 6 606 14 HOH HOH . C 3 HOH A 7 607 11 HOH HOH . C 3 HOH A 8 608 4 HOH HOH . C 3 HOH A 9 609 15 HOH HOH . C 3 HOH A 10 610 13 HOH HOH . C 3 HOH A 11 611 9 HOH HOH . C 3 HOH A 12 612 12 HOH HOH . C 3 HOH A 13 613 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 IHH . . . B 2 21.698 12.867 1.299 1 104.17 ? C3 IHH 501 A 1 HETATM 2 C C5 IHH . . . B 2 21.857 10.566 2.318 1 102.97 ? C5 IHH 501 A 1 HETATM 3 C C6 IHH . . . B 2 22.198 11.908 2.337 1 105.35 ? C6 IHH 501 A 1 HETATM 4 C C8 IHH . . . B 2 23.543 11.52 4.149 1 104.08 ? C8 IHH 501 A 1 HETATM 5 C C10 IHH . . . B 2 22.431 9.736 3.273 1 99.54 ? C10 IHH 501 A 1 HETATM 6 C C12 IHH . . . B 2 25.16 11.564 6.146 1 108.43 ? C12 IHH 501 A 1 HETATM 7 C C13 IHH . . . B 2 24.815 10.42 6.854 1 106.06 ? C13 IHH 501 A 1 HETATM 8 C C14 IHH . . . B 2 25.612 9.982 7.901 1 111.33 ? C14 IHH 501 A 1 HETATM 9 C C15 IHH . . . B 2 26.762 10.673 8.265 1 114.55 ? C15 IHH 501 A 1 HETATM 10 C C28 IHH . . . B 2 25.949 6.149 6.816 1 84.33 ? C28 IHH 501 A 1 HETATM 11 C C29 IHH . . . B 2 24.872 6.285 7.814 1 86.82 ? C29 IHH 501 A 1 HETATM 12 C C27 IHH . . . B 2 24.618 5.501 6.559 1 84.26 ? C27 IHH 501 A 1 HETATM 13 C C24 IHH . . . B 2 23.747 6.08 5.55 1 83.86 ? C24 IHH 501 A 1 HETATM 14 C C23 IHH . . . B 2 23.602 7.392 5.152 1 84.39 ? C23 IHH 501 A 1 HETATM 15 N N25 IHH . . . B 2 22.914 5.358 4.785 1 87.4 ? N25 IHH 501 A 1 HETATM 16 N N26 IHH . . . B 2 22.222 6.119 3.887 1 89.63 ? N26 IHH 501 A 1 HETATM 17 C C22 IHH . . . B 2 22.659 7.353 4.125 1 88.57 ? C22 IHH 501 A 1 HETATM 18 N N21 IHH . . . B 2 22.164 8.359 3.3 1 94.05 ? N21 IHH 501 A 1 HETATM 19 N N9 IHH . . . B 2 23.27 10.206 4.202 1 99.86 ? N9 IHH 501 A 1 HETATM 20 N N7 IHH . . . B 2 23.04 12.406 3.263 1 104.99 ? N7 IHH 501 A 1 HETATM 21 N N11 IHH . . . B 2 24.456 12.041 5.016 1 108.9 ? N11 IHH 501 A 1 HETATM 22 C C17 IHH . . . B 2 26.311 12.254 6.501 1 117.25 ? C17 IHH 501 A 1 HETATM 23 C C16 IHH . . . B 2 27.101 11.806 7.545 1 118.79 ? C16 IHH 501 A 1 HETATM 24 C C18 IHH . . . B 2 27.614 10.253 9.447 1 110.11 ? C18 IHH 501 A 1 HETATM 25 C C19 IHH . . . B 2 27.823 8.809 9.537 1 106.18 ? C19 IHH 501 A 1 HETATM 26 N N20 IHH . . . B 2 28.016 7.692 9.628 1 102.85 ? N20 IHH 501 A 1 # _model_server_stats.io_time_ms 104 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 404 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 26 #