data_6YHB
#
_model_server_result.job_id            U9FjOlPYEVhSIdNSogGM_Q 
_model_server_result.datetime_utc      '2024-11-13 04:21:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6yhb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    6YHB 
#
_exptl.entry_id    6YHB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              367.342 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-[(4,6-dimethylpyrimidin-2-yl)thio]-2,3,5,6-tetrafluorobenzenesulfonamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.5 
_cell.angle_gamma         90 
_cell.entry_id            6YHB 
_cell.length_a            41.964 
_cell.length_b            40.835 
_cell.length_c            70.419 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YHB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C N23 V50 . A V50 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? 
#
_chem_comp.formula           'C12 H9 F4 N3 O2 S2' 
_chem_comp.formula_weight    367.342 
_chem_comp.id                V50 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-[(4,6-dimethylpyrimidin-2-yl)thio]-2,3,5,6-tetrafluorobenzenesulfonamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C21 C19 V50 sing 358 n n 
C19 N20 V50 doub 359 n y 
C19 C18 V50 sing 360 n y 
N20 C15 V50 sing 361 n y 
C18 C17 V50 doub 362 n y 
S14 C15 V50 sing 363 n n 
S14 C2 V50 sing 364 n n 
C15 N16 V50 doub 365 n y 
F10 C1 V50 sing 366 n n 
C17 N16 V50 sing 367 n y 
C17 C22 V50 sing 368 n n 
C1 C2 V50 doub 369 n y 
C1 C6 V50 sing 370 n y 
C2 C3 V50 sing 371 n y 
F12 C3 V50 sing 372 n n 
C3 C4 V50 doub 373 n y 
C6 F11 V50 sing 374 n n 
C6 C5 V50 doub 375 n y 
C4 C5 V50 sing 376 n y 
C4 F13 V50 sing 377 n n 
C5 S7 V50 sing 378 n n 
N23 S7 V50 sing 379 n n 
O8 S7 V50 doub 380 n n 
S7 O9 V50 doub 381 n n 
N23 H1 V50 sing 382 n n 
N23 H2 V50 sing 383 n n 
C21 H3 V50 sing 384 n n 
C21 H4 V50 sing 385 n n 
C21 H5 V50 sing 386 n n 
C18 H6 V50 sing 387 n n 
C22 H7 V50 sing 388 n n 
C22 H8 V50 sing 389 n n 
C22 H9 V50 sing 390 n n 
#
_atom_sites.entry_id                     6YHB 
_atom_sites.fract_transf_matrix[1][1]    0.02383 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005722 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024489 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014604 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 301 1 ZN ZN . 
C 3 V50 A 1 302 1 V50 V50 . 
D 4 HOH A 1 401 67 HOH HOH . 
D 4 HOH A 2 402 71 HOH HOH . 
D 4 HOH A 3 403 66 HOH HOH . 
D 4 HOH A 4 404 11 HOH HOH . 
D 4 HOH A 5 405 4 HOH HOH . 
D 4 HOH A 6 406 79 HOH HOH . 
D 4 HOH A 7 407 64 HOH HOH . 
D 4 HOH A 8 408 110 HOH HOH . 
D 4 HOH A 9 409 76 HOH HOH . 
D 4 HOH A 10 410 44 HOH HOH . 
D 4 HOH A 11 411 83 HOH HOH . 
D 4 HOH A 12 412 48 HOH HOH . 
D 4 HOH A 13 413 31 HOH HOH . 
D 4 HOH A 14 414 100 HOH HOH . 
D 4 HOH A 15 415 116 HOH HOH . 
D 4 HOH A 16 416 58 HOH HOH . 
D 4 HOH A 17 417 54 HOH HOH . 
D 4 HOH A 18 418 21 HOH HOH . 
D 4 HOH A 19 419 3 HOH HOH . 
D 4 HOH A 20 420 30 HOH HOH . 
D 4 HOH A 21 421 46 HOH HOH . 
D 4 HOH A 22 422 47 HOH HOH . 
D 4 HOH A 23 423 61 HOH HOH . 
D 4 HOH A 24 424 16 HOH HOH . 
D 4 HOH A 25 425 56 HOH HOH . 
D 4 HOH A 26 426 45 HOH HOH . 
D 4 HOH A 27 427 86 HOH HOH . 
D 4 HOH A 28 428 33 HOH HOH . 
D 4 HOH A 29 429 112 HOH HOH . 
D 4 HOH A 30 430 15 HOH HOH . 
D 4 HOH A 31 431 41 HOH HOH . 
D 4 HOH A 32 432 27 HOH HOH . 
D 4 HOH A 33 433 36 HOH HOH . 
D 4 HOH A 34 434 6 HOH HOH . 
D 4 HOH A 35 435 63 HOH HOH . 
D 4 HOH A 36 436 37 HOH HOH . 
D 4 HOH A 37 437 29 HOH HOH . 
D 4 HOH A 38 438 85 HOH HOH . 
D 4 HOH A 39 439 65 HOH HOH . 
D 4 HOH A 40 440 106 HOH HOH . 
D 4 HOH A 41 441 13 HOH HOH . 
D 4 HOH A 42 442 59 HOH HOH . 
D 4 HOH A 43 443 26 HOH HOH . 
D 4 HOH A 44 444 89 HOH HOH . 
D 4 HOH A 45 445 14 HOH HOH . 
D 4 HOH A 46 446 92 HOH HOH . 
D 4 HOH A 47 447 7 HOH HOH . 
D 4 HOH A 48 448 5 HOH HOH . 
D 4 HOH A 49 449 20 HOH HOH . 
D 4 HOH A 50 450 49 HOH HOH . 
D 4 HOH A 51 451 24 HOH HOH . 
D 4 HOH A 52 452 38 HOH HOH . 
D 4 HOH A 53 453 25 HOH HOH . 
D 4 HOH A 54 454 40 HOH HOH . 
D 4 HOH A 55 455 10 HOH HOH . 
D 4 HOH A 56 456 42 HOH HOH . 
D 4 HOH A 57 457 8 HOH HOH . 
D 4 HOH A 58 458 52 HOH HOH . 
D 4 HOH A 59 459 1 HOH HOH . 
D 4 HOH A 60 460 9 HOH HOH . 
D 4 HOH A 61 461 94 HOH HOH . 
D 4 HOH A 62 462 78 HOH HOH . 
D 4 HOH A 63 463 93 HOH HOH . 
D 4 HOH A 64 464 84 HOH HOH . 
D 4 HOH A 65 465 43 HOH HOH . 
D 4 HOH A 66 466 80 HOH HOH . 
D 4 HOH A 67 467 101 HOH HOH . 
D 4 HOH A 68 468 62 HOH HOH . 
D 4 HOH A 69 469 39 HOH HOH . 
D 4 HOH A 70 470 88 HOH HOH . 
D 4 HOH A 71 471 19 HOH HOH . 
D 4 HOH A 72 472 108 HOH HOH . 
D 4 HOH A 73 473 68 HOH HOH . 
D 4 HOH A 74 474 35 HOH HOH . 
D 4 HOH A 75 475 22 HOH HOH . 
D 4 HOH A 76 476 69 HOH HOH . 
D 4 HOH A 77 477 57 HOH HOH . 
D 4 HOH A 78 478 51 HOH HOH . 
D 4 HOH A 79 479 2 HOH HOH . 
D 4 HOH A 80 480 72 HOH HOH . 
D 4 HOH A 81 481 102 HOH HOH . 
D 4 HOH A 82 482 96 HOH HOH . 
D 4 HOH A 83 483 23 HOH HOH . 
D 4 HOH A 84 484 60 HOH HOH . 
D 4 HOH A 85 485 77 HOH HOH . 
D 4 HOH A 86 486 70 HOH HOH . 
D 4 HOH A 87 487 28 HOH HOH . 
D 4 HOH A 88 488 12 HOH HOH . 
D 4 HOH A 89 489 81 HOH HOH . 
D 4 HOH A 90 490 99 HOH HOH . 
D 4 HOH A 91 491 32 HOH HOH . 
D 4 HOH A 92 492 91 HOH HOH . 
D 4 HOH A 93 493 103 HOH HOH . 
D 4 HOH A 94 494 50 HOH HOH . 
D 4 HOH A 95 495 98 HOH HOH . 
D 4 HOH A 96 496 53 HOH HOH . 
D 4 HOH A 97 497 18 HOH HOH . 
D 4 HOH A 98 498 34 HOH HOH . 
D 4 HOH A 99 499 113 HOH HOH . 
D 4 HOH A 100 500 109 HOH HOH . 
D 4 HOH A 101 501 107 HOH HOH . 
D 4 HOH A 102 502 55 HOH HOH . 
D 4 HOH A 103 503 104 HOH HOH . 
D 4 HOH A 104 504 105 HOH HOH . 
D 4 HOH A 105 505 87 HOH HOH . 
D 4 HOH A 106 506 73 HOH HOH . 
D 4 HOH A 107 507 17 HOH HOH . 
D 4 HOH A 108 508 115 HOH HOH . 
D 4 HOH A 109 509 111 HOH HOH . 
D 4 HOH A 110 510 75 HOH HOH . 
D 4 HOH A 111 511 95 HOH HOH . 
D 4 HOH A 112 512 90 HOH HOH . 
D 4 HOH A 113 513 82 HOH HOH . 
D 4 HOH A 114 514 114 HOH HOH . 
D 4 HOH A 115 515 97 HOH HOH . 
D 4 HOH A 116 516 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 F F13 V50 . . . C 3 -2.123 1.462 16.009 1 29.13 ? F13 V50 302 A 1 
HETATM 2 C C4 V50 . . . C 3 -2.858 2.352 15.343 1 27.88 ? C4 V50 302 A 1 
HETATM 3 C C5 V50 . . . C 3 -4.269 2.261 15.344 1 26.78 ? C5 V50 302 A 1 
HETATM 4 S S7 V50 . . . C 3 -5.086 0.972 16.283 1 22.86 ? S7 V50 302 A 1 
HETATM 5 O O9 V50 . . . C 3 -6.528 1.033 16.089 1 19.28 ? O9 V50 302 A 1 
HETATM 6 N N23 V50 . . . C 3 -4.619 -0.472 15.668 1 21.54 ? N23 V50 302 A 1 
HETATM 7 O O8 V50 . . . C 3 -4.566 1.038 17.642 1 20.41 ? O8 V50 302 A 1 
HETATM 8 C C6 V50 . . . C 3 -4.886 3.275 14.616 1 30.9 ? C6 V50 302 A 1 
HETATM 9 F F11 V50 . . . C 3 -6.199 3.293 14.557 1 35.32 ? F11 V50 302 A 1 
HETATM 10 C C1 V50 . . . C 3 -4.201 4.301 13.915 1 32.68 ? C1 V50 302 A 1 
HETATM 11 F F10 V50 . . . C 3 -4.921 5.202 13.216 1 35.34 ? F10 V50 302 A 1 
HETATM 12 C C3 V50 . . . C 3 -2.154 3.37 14.661 1 32.21 ? C3 V50 302 A 1 
HETATM 13 F F12 V50 . . . C 3 -0.807 3.437 14.742 1 32.46 ? F12 V50 302 A 1 
HETATM 14 C C2 V50 . . . C 3 -2.799 4.376 13.932 1 36.18 ? C2 V50 302 A 1 
HETATM 15 S S14 V50 . . . C 3 -1.752 5.586 13.069 1 42.05 ? S14 V50 302 A 1 
HETATM 16 C C15 V50 . . . C 3 -2.401 7.196 13.443 1 56.18 ? C15 V50 302 A 1 
HETATM 17 N N20 V50 . . . C 3 -3.636 7.363 13.913 1 61.15 ? N20 V50 302 A 1 
HETATM 18 C C19 V50 . . . C 3 -4.003 8.647 14.136 1 66.68 ? C19 V50 302 A 1 
HETATM 19 C C21 V50 . . . C 3 -5.395 8.863 14.662 1 64.85 ? C21 V50 302 A 1 
HETATM 20 C C18 V50 . . . C 3 -3.224 9.752 13.931 1 73.15 ? C18 V50 302 A 1 
HETATM 21 C C17 V50 . . . C 3 -1.972 9.438 13.452 1 75.03 ? C17 V50 302 A 1 
HETATM 22 N N16 V50 . . . C 3 -1.553 8.188 13.199 1 67.13 ? N16 V50 302 A 1 
HETATM 23 C C22 V50 . . . C 3 -0.971 10.538 13.17 1 73.61 ? C22 V50 302 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           23 
#