data_6YK7 # _model_server_result.job_id g6UAK63mtlrpk3ogUP3hWg _model_server_result.datetime_utc '2024-11-26 17:09:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yk7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6YK7 # _exptl.entry_id 6YK7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 530.661 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-azanyl-~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-(ethylamino)-1-oxidanylidene-butan-2-yl]carbamoyl]phenyl]methyl]-1-phenyl-pyrazole-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6YK7 _cell.length_a 65.349 _cell.length_b 74.83 _cell.length_c 77.199 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YK7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H38 N6 O3' _chem_comp.formula_weight 530.661 _chem_comp.id OU2 _chem_comp.mon_nstd_flag . _chem_comp.name 5-azanyl-~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-(ethylamino)-1-oxidanylidene-butan-2-yl]carbamoyl]phenyl]methyl]-1-phenyl-pyrazole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 C26 OU2 sing 246 n n C25 C24 OU2 sing 247 n n C26 C29 OU2 sing 248 n n C29 C28 OU2 sing 249 n n C23 C22 OU2 sing 250 n n C23 C24 OU2 sing 251 n n C22 C18 OU2 sing 252 n n C24 C27 OU2 sing 253 n n O C19 OU2 doub 254 n n C27 C28 OU2 sing 255 n n C19 C18 OU2 sing 256 n n C19 N4 OU2 sing 257 n n C18 N3 OU2 sing 258 n n N3 C17 OU2 sing 259 n n N4 C20 OU2 sing 260 n n C20 C21 OU2 sing 261 n n C17 O1 OU2 doub 262 n n C17 C14 OU2 sing 263 n n C15 C14 OU2 doub 264 n y C15 C16 OU2 sing 265 n y C14 C13 OU2 sing 266 n y C16 C11 OU2 doub 267 n y C13 C12 OU2 doub 268 n y C11 C12 OU2 sing 269 n y C11 C10 OU2 sing 270 n n C10 N2 OU2 sing 271 n n N2 C9 OU2 sing 272 n n C9 O2 OU2 doub 273 n n C9 C8 OU2 sing 274 n n C6 C8 OU2 sing 275 n y C6 N1 OU2 doub 276 n y C8 C7 OU2 doub 277 n y N1 N OU2 sing 278 n y C7 N OU2 sing 279 n y C7 N5 OU2 sing 280 n n N C3 OU2 sing 281 n n C3 C2 OU2 doub 282 n y C3 C4 OU2 sing 283 n y C2 C1 OU2 sing 284 n y C4 C5 OU2 doub 285 n y C1 C OU2 doub 286 n y C5 C OU2 sing 287 n y C4 H1 OU2 sing 288 n n C5 H2 OU2 sing 289 n n C6 H3 OU2 sing 290 n n N2 H4 OU2 sing 291 n n C10 H5 OU2 sing 292 n n C10 H6 OU2 sing 293 n n C12 H7 OU2 sing 294 n n N3 H8 OU2 sing 295 n n C13 H9 OU2 sing 296 n n C15 H10 OU2 sing 297 n n N4 H11 OU2 sing 298 n n N5 H12 OU2 sing 299 n n N5 H13 OU2 sing 300 n n C2 H14 OU2 sing 301 n n C1 H15 OU2 sing 302 n n C H16 OU2 sing 303 n n C16 H17 OU2 sing 304 n n C18 H18 OU2 sing 305 n n C20 H19 OU2 sing 306 n n C20 H20 OU2 sing 307 n n C21 H21 OU2 sing 308 n n C21 H22 OU2 sing 309 n n C21 H23 OU2 sing 310 n n C22 H24 OU2 sing 311 n n C22 H25 OU2 sing 312 n n C23 H26 OU2 sing 313 n n C23 H27 OU2 sing 314 n n C24 H28 OU2 sing 315 n n C27 H29 OU2 sing 316 n n C27 H30 OU2 sing 317 n n C28 H31 OU2 sing 318 n n C28 H32 OU2 sing 319 n n C29 H33 OU2 sing 320 n n C29 H34 OU2 sing 321 n n C26 H35 OU2 sing 322 n n C26 H36 OU2 sing 323 n n C25 H37 OU2 sing 324 n n C25 H38 OU2 sing 325 n n # _atom_sites.entry_id 6YK7 _atom_sites.fract_transf_matrix[1][1] 0.015302 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013364 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012954 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OU2 A 1 401 1 OU2 XXX . C 3 EDO A 1 402 1 EDO EDO . D 3 EDO A 1 403 2 EDO EDO . E 3 EDO A 1 404 3 EDO EDO . F 3 EDO A 1 405 4 EDO EDO . G 3 EDO A 1 406 5 EDO EDO . H 3 EDO A 1 407 6 EDO EDO . I 3 EDO A 1 408 7 EDO EDO . J 3 EDO A 1 409 8 EDO EDO . K 4 HOH A 1 501 191 HOH HOH . K 4 HOH A 2 502 153 HOH HOH . K 4 HOH A 3 503 134 HOH HOH . K 4 HOH A 4 504 175 HOH HOH . K 4 HOH A 5 505 186 HOH HOH . K 4 HOH A 6 506 197 HOH HOH . K 4 HOH A 7 507 114 HOH HOH . K 4 HOH A 8 508 90 HOH HOH . K 4 HOH A 9 509 156 HOH HOH . K 4 HOH A 10 510 136 HOH HOH . K 4 HOH A 11 511 165 HOH HOH . K 4 HOH A 12 512 143 HOH HOH . K 4 HOH A 13 513 27 HOH HOH . K 4 HOH A 14 514 168 HOH HOH . K 4 HOH A 15 515 73 HOH HOH . K 4 HOH A 16 516 9 HOH HOH . K 4 HOH A 17 517 190 HOH HOH . K 4 HOH A 18 518 84 HOH HOH . K 4 HOH A 19 519 11 HOH HOH . K 4 HOH A 20 520 19 HOH HOH . K 4 HOH A 21 521 50 HOH HOH . K 4 HOH A 22 522 65 HOH HOH . K 4 HOH A 23 523 23 HOH HOH . K 4 HOH A 24 524 63 HOH HOH . K 4 HOH A 25 525 164 HOH HOH . K 4 HOH A 26 526 155 HOH HOH . K 4 HOH A 27 527 26 HOH HOH . K 4 HOH A 28 528 141 HOH HOH . K 4 HOH A 29 529 69 HOH HOH . K 4 HOH A 30 530 77 HOH HOH . K 4 HOH A 31 531 194 HOH HOH . K 4 HOH A 32 532 34 HOH HOH . K 4 HOH A 33 533 37 HOH HOH . K 4 HOH A 34 534 195 HOH HOH . K 4 HOH A 35 535 71 HOH HOH . K 4 HOH A 36 536 20 HOH HOH . K 4 HOH A 37 537 51 HOH HOH . K 4 HOH A 38 538 89 HOH HOH . K 4 HOH A 39 539 93 HOH HOH . K 4 HOH A 40 540 170 HOH HOH . K 4 HOH A 41 541 133 HOH HOH . K 4 HOH A 42 542 96 HOH HOH . K 4 HOH A 43 543 38 HOH HOH . K 4 HOH A 44 544 177 HOH HOH . K 4 HOH A 45 545 122 HOH HOH . K 4 HOH A 46 546 31 HOH HOH . K 4 HOH A 47 547 193 HOH HOH . K 4 HOH A 48 548 36 HOH HOH . K 4 HOH A 49 549 17 HOH HOH . K 4 HOH A 50 550 21 HOH HOH . K 4 HOH A 51 551 18 HOH HOH . K 4 HOH A 52 552 2 HOH HOH . K 4 HOH A 53 553 171 HOH HOH . K 4 HOH A 54 554 94 HOH HOH . K 4 HOH A 55 555 144 HOH HOH . K 4 HOH A 56 556 137 HOH HOH . K 4 HOH A 57 557 182 HOH HOH . K 4 HOH A 58 558 152 HOH HOH . K 4 HOH A 59 559 39 HOH HOH . K 4 HOH A 60 560 81 HOH HOH . K 4 HOH A 61 561 42 HOH HOH . K 4 HOH A 62 562 10 HOH HOH . K 4 HOH A 63 563 7 HOH HOH . K 4 HOH A 64 564 75 HOH HOH . K 4 HOH A 65 565 61 HOH HOH . K 4 HOH A 66 566 5 HOH HOH . K 4 HOH A 67 567 138 HOH HOH . K 4 HOH A 68 568 85 HOH HOH . K 4 HOH A 69 569 104 HOH HOH . K 4 HOH A 70 570 76 HOH HOH . K 4 HOH A 71 571 140 HOH HOH . K 4 HOH A 72 572 103 HOH HOH . K 4 HOH A 73 573 25 HOH HOH . K 4 HOH A 74 574 162 HOH HOH . K 4 HOH A 75 575 142 HOH HOH . K 4 HOH A 76 576 163 HOH HOH . K 4 HOH A 77 577 201 HOH HOH . K 4 HOH A 78 578 55 HOH HOH . K 4 HOH A 79 579 83 HOH HOH . K 4 HOH A 80 580 4 HOH HOH . K 4 HOH A 81 581 53 HOH HOH . K 4 HOH A 82 582 183 HOH HOH . K 4 HOH A 83 583 192 HOH HOH . K 4 HOH A 84 584 174 HOH HOH . K 4 HOH A 85 585 29 HOH HOH . K 4 HOH A 86 586 44 HOH HOH . K 4 HOH A 87 587 72 HOH HOH . K 4 HOH A 88 588 107 HOH HOH . K 4 HOH A 89 589 180 HOH HOH . K 4 HOH A 90 590 82 HOH HOH . K 4 HOH A 91 591 101 HOH HOH . K 4 HOH A 92 592 45 HOH HOH . K 4 HOH A 93 593 187 HOH HOH . K 4 HOH A 94 594 16 HOH HOH . K 4 HOH A 95 595 8 HOH HOH . K 4 HOH A 96 596 49 HOH HOH . K 4 HOH A 97 597 3 HOH HOH . K 4 HOH A 98 598 60 HOH HOH . K 4 HOH A 99 599 173 HOH HOH . K 4 HOH A 100 600 78 HOH HOH . K 4 HOH A 101 601 115 HOH HOH . K 4 HOH A 102 602 33 HOH HOH . K 4 HOH A 103 603 62 HOH HOH . K 4 HOH A 104 604 30 HOH HOH . K 4 HOH A 105 605 68 HOH HOH . K 4 HOH A 106 606 22 HOH HOH . K 4 HOH A 107 607 87 HOH HOH . K 4 HOH A 108 608 108 HOH HOH . K 4 HOH A 109 609 160 HOH HOH . K 4 HOH A 110 610 185 HOH HOH . K 4 HOH A 111 611 58 HOH HOH . K 4 HOH A 112 612 109 HOH HOH . K 4 HOH A 113 613 148 HOH HOH . K 4 HOH A 114 614 200 HOH HOH . K 4 HOH A 115 615 32 HOH HOH . K 4 HOH A 116 616 59 HOH HOH . K 4 HOH A 117 617 198 HOH HOH . K 4 HOH A 118 618 57 HOH HOH . K 4 HOH A 119 619 74 HOH HOH . K 4 HOH A 120 620 56 HOH HOH . K 4 HOH A 121 621 181 HOH HOH . K 4 HOH A 122 622 199 HOH HOH . K 4 HOH A 123 623 43 HOH HOH . K 4 HOH A 124 624 172 HOH HOH . K 4 HOH A 125 625 13 HOH HOH . K 4 HOH A 126 626 41 HOH HOH . K 4 HOH A 127 627 40 HOH HOH . K 4 HOH A 128 628 46 HOH HOH . K 4 HOH A 129 629 169 HOH HOH . K 4 HOH A 130 630 147 HOH HOH . K 4 HOH A 131 631 67 HOH HOH . K 4 HOH A 132 632 126 HOH HOH . K 4 HOH A 133 633 99 HOH HOH . K 4 HOH A 134 634 6 HOH HOH . K 4 HOH A 135 635 15 HOH HOH . K 4 HOH A 136 636 129 HOH HOH . K 4 HOH A 137 637 154 HOH HOH . K 4 HOH A 138 638 151 HOH HOH . K 4 HOH A 139 639 188 HOH HOH . K 4 HOH A 140 640 12 HOH HOH . K 4 HOH A 141 641 196 HOH HOH . K 4 HOH A 142 642 64 HOH HOH . K 4 HOH A 143 643 149 HOH HOH . K 4 HOH A 144 644 70 HOH HOH . K 4 HOH A 145 645 28 HOH HOH . K 4 HOH A 146 646 178 HOH HOH . K 4 HOH A 147 647 159 HOH HOH . K 4 HOH A 148 648 106 HOH HOH . K 4 HOH A 149 649 80 HOH HOH . K 4 HOH A 150 650 14 HOH HOH . K 4 HOH A 151 651 35 HOH HOH . K 4 HOH A 152 652 189 HOH HOH . K 4 HOH A 153 653 146 HOH HOH . K 4 HOH A 154 654 166 HOH HOH . K 4 HOH A 155 655 123 HOH HOH . K 4 HOH A 156 656 158 HOH HOH . K 4 HOH A 157 657 167 HOH HOH . K 4 HOH A 158 658 131 HOH HOH . K 4 HOH A 159 659 132 HOH HOH . K 4 HOH A 160 660 127 HOH HOH . K 4 HOH A 161 661 119 HOH HOH . K 4 HOH A 162 662 161 HOH HOH . K 4 HOH A 163 663 48 HOH HOH . K 4 HOH A 164 664 111 HOH HOH . K 4 HOH A 165 665 157 HOH HOH . K 4 HOH A 166 666 92 HOH HOH . K 4 HOH A 167 667 86 HOH HOH . K 4 HOH A 168 668 179 HOH HOH . K 4 HOH A 169 669 176 HOH HOH . K 4 HOH A 170 670 79 HOH HOH . K 4 HOH A 171 671 121 HOH HOH . K 4 HOH A 172 672 24 HOH HOH . K 4 HOH A 173 673 120 HOH HOH . K 4 HOH A 174 674 130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 OU2 . . . B 2 -2.597 35.189 25.828 1 49.55 ? C4 OU2 401 A 1 HETATM 2 C C5 OU2 . . . B 2 -1.922 35.093 27.033 1 50.74 ? C5 OU2 401 A 1 HETATM 3 C C6 OU2 . . . B 2 -3.358 35.364 21.526 1 34.61 ? C6 OU2 401 A 1 HETATM 4 N N1 OU2 . . . B 2 -2.748 34.808 22.564 1 35.03 ? N1 OU2 401 A 1 HETATM 5 C C7 OU2 . . . B 2 -3.185 36.986 23.02 1 34.03 ? C7 OU2 401 A 1 HETATM 6 C C8 OU2 . . . B 2 -3.652 36.729 21.742 1 32.37 ? C8 OU2 401 A 1 HETATM 7 N N2 OU2 . . . B 2 -4.659 37.419 19.707 1 25.68 ? N2 OU2 401 A 1 HETATM 8 C C9 OU2 . . . B 2 -4.235 37.794 20.908 1 29.77 ? C9 OU2 401 A 1 HETATM 9 C C10 OU2 . . . B 2 -5.14 38.363 18.711 1 26.25 ? C10 OU2 401 A 1 HETATM 10 C C11 OU2 . . . B 2 -4.042 38.919 17.836 1 24.87 ? C11 OU2 401 A 1 HETATM 11 C C12 OU2 . . . B 2 -2.696 38.749 18.15 1 25.33 ? C12 OU2 401 A 1 HETATM 12 N N3 OU2 . . . B 2 -1.149 41.503 14.504 1 23.94 ? N3 OU2 401 A 1 HETATM 13 C C13 OU2 . . . B 2 -1.709 39.313 17.37 1 24.35 ? C13 OU2 401 A 1 HETATM 14 C C14 OU2 . . . B 2 -2.033 40.057 16.242 1 24.52 ? C14 OU2 401 A 1 HETATM 15 C C15 OU2 . . . B 2 -3.385 40.225 15.924 1 25.23 ? C15 OU2 401 A 1 HETATM 16 N N4 OU2 . . . B 2 -0.19 44.289 14.758 1 32.42 ? N4 OU2 401 A 1 HETATM 17 O O2 OU2 . . . B 2 -4.27 38.967 21.313 1 31.1 ? O2 OU2 401 A 1 HETATM 18 N N5 OU2 . . . B 2 -3.295 38.098 23.745 1 32.87 ? N5 OU2 401 A 1 HETATM 19 N N OU2 . . . B 2 -2.63 35.831 23.474 1 37.45 ? N OU2 401 A 1 HETATM 20 C C3 OU2 . . . B 2 -1.915 35.598 24.689 1 44.05 ? C3 OU2 401 A 1 HETATM 21 C C2 OU2 . . . B 2 -0.558 35.877 24.753 1 49.14 ? C2 OU2 401 A 1 HETATM 22 C C1 OU2 . . . B 2 0.106 35.773 25.964 1 54.42 ? C1 OU2 401 A 1 HETATM 23 C C OU2 . . . B 2 -0.578 35.391 27.105 1 54.83 ? C OU2 401 A 1 HETATM 24 C C16 OU2 . . . B 2 -4.366 39.656 16.712 1 23.66 ? C16 OU2 401 A 1 HETATM 25 C C17 OU2 . . . B 2 -0.888 40.58 15.436 1 24.73 ? C17 OU2 401 A 1 HETATM 26 O O1 OU2 . . . B 2 0.24 40.137 15.624 1 25.07 ? O1 OU2 401 A 1 HETATM 27 C C18 OU2 . . . B 2 -0.12 42.12 13.68 1 26.43 ? C18 OU2 401 A 1 HETATM 28 C C19 OU2 . . . B 2 -0.316 43.634 13.614 1 29.21 ? C19 OU2 401 A 1 HETATM 29 O O OU2 . . . B 2 -0.629 44.174 12.558 1 31.57 ? O OU2 401 A 1 HETATM 30 C C20 OU2 . . . B 2 -0.694 45.63 15.028 1 38.94 ? C20 OU2 401 A 1 HETATM 31 C C21 OU2 . . . B 2 0.416 46.605 15.037 1 40.73 ? C21 OU2 401 A 1 HETATM 32 C C22 OU2 . . . B 2 -0.132 41.563 12.261 1 26.86 ? C22 OU2 401 A 1 HETATM 33 C C23 OU2 . . . B 2 0.585 40.257 12.059 1 27.41 ? C23 OU2 401 A 1 HETATM 34 C C24 OU2 . . . B 2 2.099 40.289 12.382 1 27.2 ? C24 OU2 401 A 1 HETATM 35 C C27 OU2 . . . B 2 2.571 38.928 12.872 1 27.31 ? C27 OU2 401 A 1 HETATM 36 C C28 OU2 . . . B 2 4.071 38.866 13.152 1 26.9 ? C28 OU2 401 A 1 HETATM 37 C C29 OU2 . . . B 2 4.87 39.318 11.949 1 26.93 ? C29 OU2 401 A 1 HETATM 38 C C26 OU2 . . . B 2 4.435 40.702 11.499 1 27.28 ? C26 OU2 401 A 1 HETATM 39 C C25 OU2 . . . B 2 2.94 40.735 11.192 1 29.7 ? C25 OU2 401 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 39 #