data_6YLZ
#
_model_server_result.job_id            sp1PyCXeGjoHftczfxH4Dg 
_model_server_result.datetime_utc      '2024-12-23 04:25:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ylz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":304}' 
#
_entry.id    6YLZ 
#
_exptl.entry_id    6YLZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6YLZ 
_cell.length_a            63.776 
_cell.length_b            63.776 
_cell.length_c            124.727 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YLZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 314 n n 
P O2 PO4 sing 315 n n 
P O3 PO4 sing 316 n n 
P O4 PO4 sing 317 n n 
#
_atom_sites.entry_id                     6YLZ 
_atom_sites.fract_transf_matrix[1][1]    0.01568 
_atom_sites.fract_transf_matrix[1][2]    0.009053 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018106 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008018 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMN AAA 1 301 301 FMN FMN . 
C 3 SO4 AAA 1 302 2 SO4 SO4 . 
D 3 SO4 AAA 1 303 3 SO4 SO4 . 
E 4 PO4 AAA 1 304 1 PO4 PO4 . 
F 5 HOH AAA 1 401 742 HOH HOH . 
F 5 HOH AAA 2 402 639 HOH HOH . 
F 5 HOH AAA 3 403 215 HOH HOH . 
F 5 HOH AAA 4 404 645 HOH HOH . 
F 5 HOH AAA 5 405 27 HOH HOH . 
F 5 HOH AAA 6 406 700 HOH HOH . 
F 5 HOH AAA 7 407 195 HOH HOH . 
F 5 HOH AAA 8 408 82 HOH HOH . 
F 5 HOH AAA 9 409 102 HOH HOH . 
F 5 HOH AAA 10 410 155 HOH HOH . 
F 5 HOH AAA 11 411 354 HOH HOH . 
F 5 HOH AAA 12 412 713 HOH HOH . 
F 5 HOH AAA 13 413 118 HOH HOH . 
F 5 HOH AAA 14 414 31 HOH HOH . 
F 5 HOH AAA 15 415 4 HOH HOH . 
F 5 HOH AAA 16 416 24 HOH HOH . 
F 5 HOH AAA 17 417 47 HOH HOH . 
F 5 HOH AAA 18 418 11 HOH HOH . 
F 5 HOH AAA 19 419 42 HOH HOH . 
F 5 HOH AAA 20 420 134 HOH HOH . 
F 5 HOH AAA 21 421 117 HOH HOH . 
F 5 HOH AAA 22 422 48 HOH HOH . 
F 5 HOH AAA 23 423 689 HOH HOH . 
F 5 HOH AAA 24 424 62 HOH HOH . 
F 5 HOH AAA 25 425 162 HOH HOH . 
F 5 HOH AAA 26 426 213 HOH HOH . 
F 5 HOH AAA 27 427 672 HOH HOH . 
F 5 HOH AAA 28 428 121 HOH HOH . 
F 5 HOH AAA 29 429 53 HOH HOH . 
F 5 HOH AAA 30 430 9 HOH HOH . 
F 5 HOH AAA 31 431 61 HOH HOH . 
F 5 HOH AAA 32 432 392 HOH HOH . 
F 5 HOH AAA 33 433 54 HOH HOH . 
F 5 HOH AAA 34 434 123 HOH HOH . 
F 5 HOH AAA 35 435 20 HOH HOH . 
F 5 HOH AAA 36 436 111 HOH HOH . 
F 5 HOH AAA 37 437 36 HOH HOH . 
F 5 HOH AAA 38 438 13 HOH HOH . 
F 5 HOH AAA 39 439 35 HOH HOH . 
F 5 HOH AAA 40 440 741 HOH HOH . 
F 5 HOH AAA 41 441 37 HOH HOH . 
F 5 HOH AAA 42 442 196 HOH HOH . 
F 5 HOH AAA 43 443 177 HOH HOH . 
F 5 HOH AAA 44 444 66 HOH HOH . 
F 5 HOH AAA 45 445 114 HOH HOH . 
F 5 HOH AAA 46 446 6 HOH HOH . 
F 5 HOH AAA 47 447 106 HOH HOH . 
F 5 HOH AAA 48 448 14 HOH HOH . 
F 5 HOH AAA 49 449 21 HOH HOH . 
F 5 HOH AAA 50 450 18 HOH HOH . 
F 5 HOH AAA 51 451 69 HOH HOH . 
F 5 HOH AAA 52 452 120 HOH HOH . 
F 5 HOH AAA 53 453 43 HOH HOH . 
F 5 HOH AAA 54 454 2 HOH HOH . 
F 5 HOH AAA 55 455 112 HOH HOH . 
F 5 HOH AAA 56 456 116 HOH HOH . 
F 5 HOH AAA 57 457 226 HOH HOH . 
F 5 HOH AAA 58 458 10 HOH HOH . 
F 5 HOH AAA 59 459 19 HOH HOH . 
F 5 HOH AAA 60 460 39 HOH HOH . 
F 5 HOH AAA 61 461 119 HOH HOH . 
F 5 HOH AAA 62 462 15 HOH HOH . 
F 5 HOH AAA 63 463 674 HOH HOH . 
F 5 HOH AAA 64 464 675 HOH HOH . 
F 5 HOH AAA 65 465 17 HOH HOH . 
F 5 HOH AAA 66 466 223 HOH HOH . 
F 5 HOH AAA 67 467 638 HOH HOH . 
F 5 HOH AAA 68 468 63 HOH HOH . 
F 5 HOH AAA 69 469 52 HOH HOH . 
F 5 HOH AAA 70 470 140 HOH HOH . 
F 5 HOH AAA 71 471 322 HOH HOH . 
F 5 HOH AAA 72 472 1 HOH HOH . 
F 5 HOH AAA 73 473 22 HOH HOH . 
F 5 HOH AAA 74 474 105 HOH HOH . 
F 5 HOH AAA 75 475 16 HOH HOH . 
F 5 HOH AAA 76 476 91 HOH HOH . 
F 5 HOH AAA 77 477 572 HOH HOH . 
F 5 HOH AAA 78 478 619 HOH HOH . 
F 5 HOH AAA 79 479 164 HOH HOH . 
F 5 HOH AAA 80 480 79 HOH HOH . 
F 5 HOH AAA 81 481 93 HOH HOH . 
F 5 HOH AAA 82 482 680 HOH HOH . 
F 5 HOH AAA 83 483 30 HOH HOH . 
F 5 HOH AAA 84 484 12 HOH HOH . 
F 5 HOH AAA 85 485 72 HOH HOH . 
F 5 HOH AAA 86 486 131 HOH HOH . 
F 5 HOH AAA 87 487 46 HOH HOH . 
F 5 HOH AAA 88 488 682 HOH HOH . 
F 5 HOH AAA 89 489 137 HOH HOH . 
F 5 HOH AAA 90 490 68 HOH HOH . 
F 5 HOH AAA 91 491 3 HOH HOH . 
F 5 HOH AAA 92 492 89 HOH HOH . 
F 5 HOH AAA 93 493 70 HOH HOH . 
F 5 HOH AAA 94 494 122 HOH HOH . 
F 5 HOH AAA 95 495 124 HOH HOH . 
F 5 HOH AAA 96 496 8 HOH HOH . 
F 5 HOH AAA 97 497 644 HOH HOH . 
F 5 HOH AAA 98 498 163 HOH HOH . 
F 5 HOH AAA 99 499 139 HOH HOH . 
F 5 HOH AAA 100 500 58 HOH HOH . 
F 5 HOH AAA 101 501 55 HOH HOH . 
F 5 HOH AAA 102 502 687 HOH HOH . 
F 5 HOH AAA 103 503 23 HOH HOH . 
F 5 HOH AAA 104 504 5 HOH HOH . 
F 5 HOH AAA 105 505 76 HOH HOH . 
F 5 HOH AAA 106 506 643 HOH HOH . 
F 5 HOH AAA 107 507 60 HOH HOH . 
F 5 HOH AAA 108 508 161 HOH HOH . 
F 5 HOH AAA 109 509 25 HOH HOH . 
F 5 HOH AAA 110 510 681 HOH HOH . 
F 5 HOH AAA 111 511 41 HOH HOH . 
F 5 HOH AAA 112 512 33 HOH HOH . 
F 5 HOH AAA 113 513 40 HOH HOH . 
F 5 HOH AAA 114 514 38 HOH HOH . 
F 5 HOH AAA 115 515 29 HOH HOH . 
F 5 HOH AAA 116 516 205 HOH HOH . 
F 5 HOH AAA 117 517 629 HOH HOH . 
F 5 HOH AAA 118 518 115 HOH HOH . 
F 5 HOH AAA 119 519 75 HOH HOH . 
F 5 HOH AAA 120 520 729 HOH HOH . 
F 5 HOH AAA 121 521 597 HOH HOH . 
F 5 HOH AAA 122 522 281 HOH HOH . 
F 5 HOH AAA 123 523 694 HOH HOH . 
F 5 HOH AAA 124 524 726 HOH HOH . 
F 5 HOH AAA 125 525 709 HOH HOH . 
F 5 HOH AAA 126 526 690 HOH HOH . 
F 5 HOH AAA 127 527 28 HOH HOH . 
F 5 HOH AAA 128 528 622 HOH HOH . 
F 5 HOH AAA 129 529 718 HOH HOH . 
F 5 HOH AAA 130 530 676 HOH HOH . 
F 5 HOH AAA 131 531 45 HOH HOH . 
F 5 HOH AAA 132 532 200 HOH HOH . 
F 5 HOH AAA 133 533 210 HOH HOH . 
F 5 HOH AAA 134 534 184 HOH HOH . 
F 5 HOH AAA 135 535 113 HOH HOH . 
F 5 HOH AAA 136 536 74 HOH HOH . 
F 5 HOH AAA 137 537 627 HOH HOH . 
F 5 HOH AAA 138 538 101 HOH HOH . 
F 5 HOH AAA 139 539 186 HOH HOH . 
F 5 HOH AAA 140 540 618 HOH HOH . 
F 5 HOH AAA 141 541 245 HOH HOH . 
F 5 HOH AAA 142 542 190 HOH HOH . 
F 5 HOH AAA 143 543 59 HOH HOH . 
F 5 HOH AAA 144 544 311 HOH HOH . 
F 5 HOH AAA 145 545 653 HOH HOH . 
F 5 HOH AAA 146 546 67 HOH HOH . 
F 5 HOH AAA 147 547 716 HOH HOH . 
F 5 HOH AAA 148 548 529 HOH HOH . 
F 5 HOH AAA 149 549 302 HOH HOH . 
F 5 HOH AAA 150 550 630 HOH HOH . 
F 5 HOH AAA 151 551 198 HOH HOH . 
F 5 HOH AAA 152 552 234 HOH HOH . 
F 5 HOH AAA 153 553 555 HOH HOH . 
F 5 HOH AAA 154 554 647 HOH HOH . 
F 5 HOH AAA 155 555 97 HOH HOH . 
F 5 HOH AAA 156 556 238 HOH HOH . 
F 5 HOH AAA 157 557 80 HOH HOH . 
F 5 HOH AAA 158 558 216 HOH HOH . 
F 5 HOH AAA 159 559 706 HOH HOH . 
F 5 HOH AAA 160 560 103 HOH HOH . 
F 5 HOH AAA 161 561 731 HOH HOH . 
F 5 HOH AAA 162 562 183 HOH HOH . 
F 5 HOH AAA 163 563 197 HOH HOH . 
F 5 HOH AAA 164 564 185 HOH HOH . 
F 5 HOH AAA 165 565 187 HOH HOH . 
F 5 HOH AAA 166 566 99 HOH HOH . 
F 5 HOH AAA 167 567 367 HOH HOH . 
F 5 HOH AAA 168 568 312 HOH HOH . 
F 5 HOH AAA 169 569 217 HOH HOH . 
F 5 HOH AAA 170 570 693 HOH HOH . 
F 5 HOH AAA 171 571 230 HOH HOH . 
F 5 HOH AAA 172 572 214 HOH HOH . 
F 5 HOH AAA 173 573 655 HOH HOH . 
F 5 HOH AAA 174 574 194 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . E 4 -21.669 -1.423 22.839 0.75 44.67 ? P PO4 304 AAA 1 
HETATM 2 O O1 PO4 . . . E 4 -21.376 -0.238 21.945 0.75 51.95 ? O1 PO4 304 AAA 1 
HETATM 3 O O2 PO4 . . . E 4 -21.176 -2.716 22.184 0.75 34.98 ? O2 PO4 304 AAA 1 
HETATM 4 O O3 PO4 . . . E 4 -23.144 -1.481 23.123 0.75 47.8 ? O3 PO4 304 AAA 1 
HETATM 5 O O4 PO4 . . . E 4 -20.957 -1.228 24.156 0.75 46.11 ? O4 PO4 304 AAA 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           357 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           5 
#