data_6YN8 # _model_server_result.job_id 9Ub-2NJ1UebSa89jj4SBVw _model_server_result.datetime_utc '2025-02-16 16:49:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yn8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 6YN8 # _exptl.entry_id 6YN8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 511.575 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-azanyl-3-methyl-~{N}-[(3~{R})-4-oxidanylidene-5-[[4-[2-(1~{H}-1,2,3,4-tetrazol-5-yl)phenyl]phenyl]methyl]-2,3-dihydro-1,5-benzoxazepin-3-yl]butanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6YN8 _cell.length_a 101.293 _cell.length_b 106.356 _cell.length_c 106.455 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YN8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H29 N7 O3' _chem_comp.formula_weight 511.575 _chem_comp.id OZK _chem_comp.mon_nstd_flag . _chem_comp.name 3-azanyl-3-methyl-~{N}-[(3~{R})-4-oxidanylidene-5-[[4-[2-(1~{H}-1,2,3,4-tetrazol-5-yl)phenyl]phenyl]methyl]-2,3-dihydro-1,5-benzoxazepin-3-yl]butanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 C25 OZK doub 237 n y C24 C23 OZK sing 238 n y C25 C26 OZK sing 239 n y C23 C22 OZK doub 240 n y C26 C21 OZK doub 241 n y C22 C21 OZK sing 242 n y C22 C27 OZK sing 243 n n C21 C18 OZK sing 244 n n C19 C18 OZK doub 245 n y C19 C20 OZK sing 246 n y C27 N4 OZK doub 247 n y C27 N7 OZK sing 248 n y C18 C17 OZK sing 249 n y N4 N5 OZK sing 250 n y C20 C15 OZK doub 251 n y N7 N6 OZK sing 252 n y N5 N6 OZK doub 253 n y C17 C16 OZK doub 254 n y C15 C16 OZK sing 255 n y C15 C14 OZK sing 256 n n C14 N3 OZK sing 257 n n C3 C2 OZK sing 258 n n O3 C28 OZK doub 259 n n N3 C28 OZK sing 260 n n N3 C9 OZK sing 261 n n N1 C2 OZK sing 262 n n C1 C2 OZK sing 263 n n C2 C4 OZK sing 264 n n C28 C6 OZK sing 265 n n C9 C10 OZK doub 266 n y C9 C8 OZK sing 267 n y C10 C11 OZK sing 268 n y C4 C5 OZK sing 269 n n C5 N2 OZK sing 270 n n C5 O1 OZK doub 271 n n C6 N2 OZK sing 272 n n C6 C7 OZK sing 273 n n O2 C8 OZK sing 274 n n O2 C7 OZK sing 275 n n C8 C13 OZK doub 276 n y C11 C12 OZK doub 277 n y C13 C12 OZK sing 278 n y C1 H1 OZK sing 279 n n C1 H2 OZK sing 280 n n C1 H3 OZK sing 281 n n C3 H4 OZK sing 282 n n C3 H5 OZK sing 283 n n C3 H6 OZK sing 284 n n C11 H7 OZK sing 285 n n C12 H8 OZK sing 286 n n C13 H9 OZK sing 287 n n C14 H10 OZK sing 288 n n C14 H11 OZK sing 289 n n C16 H12 OZK sing 290 n n C17 H13 OZK sing 291 n n C19 H14 OZK sing 292 n n C20 H15 OZK sing 293 n n C23 H16 OZK sing 294 n n C24 H17 OZK sing 295 n n C25 H18 OZK sing 296 n n C26 H19 OZK sing 297 n n C6 H20 OZK sing 298 n n N2 H21 OZK sing 299 n n C4 H22 OZK sing 300 n n C4 H23 OZK sing 301 n n N1 H24 OZK sing 302 n n N1 H25 OZK sing 303 n n C10 H27 OZK sing 304 n n C7 H28 OZK sing 305 n n C7 H29 OZK sing 306 n n N7 H30 OZK sing 307 n n # _atom_sites.entry_id 6YN8 _atom_sites.fract_transf_matrix[1][1] 0.009872 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009402 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009394 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OZK A 1 801 1 OZK LI1 . C 3 HOH A 1 901 4 HOH HOH . C 3 HOH A 2 902 3 HOH HOH . C 3 HOH A 3 903 2 HOH HOH . C 3 HOH A 4 904 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OZK . . . B 2 -17.248 -13.332 -14.653 1 76.04 ? C1 OZK 801 A 1 HETATM 2 C C2 OZK . . . B 2 -18.393 -14.342 -14.651 1 76.57 ? C2 OZK 801 A 1 HETATM 3 C C3 OZK . . . B 2 -18.136 -15.201 -15.908 1 76.21 ? C3 OZK 801 A 1 HETATM 4 O O1 OZK . . . B 2 -20.553 -15.935 -13.099 1 78.32 ? O1 OZK 801 A 1 HETATM 5 O O2 OZK . . . B 2 -19.916 -21.032 -12.836 1 77.31 ? O2 OZK 801 A 1 HETATM 6 O O3 OZK . . . B 2 -19.682 -18.453 -15.581 1 78.8 ? O3 OZK 801 A 1 HETATM 7 C C11 OZK . . . B 2 -24.025 -20.751 -12.38 1 76.84 ? C11 OZK 801 A 1 HETATM 8 C C12 OZK . . . B 2 -23.248 -21.371 -11.416 1 76.72 ? C12 OZK 801 A 1 HETATM 9 C C13 OZK . . . B 2 -21.873 -21.467 -11.571 1 76.82 ? C13 OZK 801 A 1 HETATM 10 C C14 OZK . . . B 2 -22.048 -19.778 -16.119 1 77.01 ? C14 OZK 801 A 1 HETATM 11 C C15 OZK . . . B 2 -21.259 -20.644 -17.072 1 76.99 ? C15 OZK 801 A 1 HETATM 12 C C16 OZK . . . B 2 -20.218 -21.441 -16.616 1 77.23 ? C16 OZK 801 A 1 HETATM 13 C C17 OZK . . . B 2 -19.489 -22.226 -17.486 1 77.24 ? C17 OZK 801 A 1 HETATM 14 C C18 OZK . . . B 2 -19.777 -22.249 -18.846 1 77.65 ? C18 OZK 801 A 1 HETATM 15 C C19 OZK . . . B 2 -20.826 -21.455 -19.301 1 76.97 ? C19 OZK 801 A 1 HETATM 16 C C20 OZK . . . B 2 -21.552 -20.664 -18.43 1 76.99 ? C20 OZK 801 A 1 HETATM 17 C C21 OZK . . . B 2 -19.022 -23.134 -19.774 1 79.34 ? C21 OZK 801 A 1 HETATM 18 C C22 OZK . . . B 2 -17.615 -23.184 -19.823 1 80.66 ? C22 OZK 801 A 1 HETATM 19 C C23 OZK . . . B 2 -16.973 -24.011 -20.743 1 80.25 ? C23 OZK 801 A 1 HETATM 20 C C24 OZK . . . B 2 -17.721 -24.78 -21.614 1 79.77 ? C24 OZK 801 A 1 HETATM 21 C C25 OZK . . . B 2 -19.098 -24.745 -21.566 1 79.54 ? C25 OZK 801 A 1 HETATM 22 C C26 OZK . . . B 2 -19.748 -23.938 -20.654 1 79.42 ? C26 OZK 801 A 1 HETATM 23 C C27 OZK . . . B 2 -16.768 -22.401 -18.909 1 82.13 ? C27 OZK 801 A 1 HETATM 24 C C28 OZK . . . B 2 -20.302 -18.89 -14.626 1 78.14 ? C28 OZK 801 A 1 HETATM 25 C C6 OZK . . . B 2 -19.809 -18.601 -13.173 1 77.83 ? C6 OZK 801 A 1 HETATM 26 N N2 OZK . . . B 2 -18.901 -17.47 -13.136 1 77.93 ? N2 OZK 801 A 1 HETATM 27 C C5 OZK . . . B 2 -19.358 -16.215 -13.174 1 78.05 ? C5 OZK 801 A 1 HETATM 28 C C4 OZK . . . B 2 -18.297 -15.15 -13.32 1 77.62 ? C4 OZK 801 A 1 HETATM 29 N N1 OZK . . . B 2 -19.673 -13.627 -14.683 1 76.48 ? N1 OZK 801 A 1 HETATM 30 N N3 OZK . . . B 2 -21.434 -19.637 -14.778 1 77.46 ? N3 OZK 801 A 1 HETATM 31 C C9 OZK . . . B 2 -22.063 -20.296 -13.675 1 77.26 ? C9 OZK 801 A 1 HETATM 32 C C10 OZK . . . B 2 -23.442 -20.205 -13.517 1 77.05 ? C10 OZK 801 A 1 HETATM 33 C C8 OZK . . . B 2 -21.287 -20.934 -12.706 1 77.19 ? C8 OZK 801 A 1 HETATM 34 C C7 OZK . . . B 2 -19.194 -19.862 -12.507 1 77.61 ? C7 OZK 801 A 1 HETATM 35 N N7 OZK . . . B 2 -15.76 -22.901 -18.186 1 82.65 ? N7 OZK 801 A 1 HETATM 36 N N6 OZK . . . B 2 -15.299 -21.944 -17.35 1 83.1 ? N6 OZK 801 A 1 HETATM 37 N N5 OZK . . . B 2 -16.009 -20.89 -17.583 1 83.35 ? N5 OZK 801 A 1 HETATM 38 N N4 OZK . . . B 2 -16.927 -21.133 -18.561 1 82.99 ? N4 OZK 801 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #