data_6YOB # _model_server_result.job_id M7HCv8t47nLL4kqBoRFvtw _model_server_result.datetime_utc '2024-10-19 01:35:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yob # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":210}' # _entry.id 6YOB # _exptl.entry_id 6YOB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 120.147 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2-METHOXYETHOXY)ETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6YOB _cell.length_a 79.17 _cell.length_b 79.17 _cell.length_c 38.24 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YOB _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc1 A O SER 60 A SER 60 1_555 I NA NA . A NA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc2 A O CYS 64 A CYS 64 1_555 I NA NA . A NA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc3 A OG SER 72 A SER 72 1_555 I NA NA . A NA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc4 A O ARG 73 A ARG 73 1_555 I NA NA . A NA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc5 I NA NA . A NA 208 1_555 L O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc6 I NA NA . A NA 208 1_555 L O HOH . A HOH 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? # _chem_comp.formula 'C5 H12 O3' _chem_comp.formula_weight 120.147 _chem_comp.id PG0 _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2-METHOXYETHOXY)ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'PEG 6000' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 O2 PG0 sing 244 n n C5 H51 PG0 sing 245 n n C5 H52 PG0 sing 246 n n C5 H53 PG0 sing 247 n n O2 C4 PG0 sing 248 n n C4 C3 PG0 sing 249 n n C4 H41 PG0 sing 250 n n C4 H42 PG0 sing 251 n n C3 O1 PG0 sing 252 n n C3 H31 PG0 sing 253 n n C3 H32 PG0 sing 254 n n O1 C2 PG0 sing 255 n n C2 C1 PG0 sing 256 n n C2 H21 PG0 sing 257 n n C2 H22 PG0 sing 258 n n C1 OTT PG0 sing 259 n n C1 H11 PG0 sing 260 n n C1 H12 PG0 sing 261 n n OTT HTT PG0 sing 262 n n # _atom_sites.entry_id 6YOB _atom_sites.fract_transf_matrix[1][1] 0.012631 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012631 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BR A 1 201 201 BR BR . C 2 BR A 1 202 202 BR BR . D 2 BR A 1 203 203 BR BR . E 2 BR A 1 204 205 BR BR . F 2 BR A 1 205 206 BR BR . G 2 BR A 1 206 207 BR BR . H 2 BR A 1 207 208 BR BR . I 3 NA A 1 208 209 NA NA . J 4 ACY A 1 209 210 ACY ACY . K 5 PG0 A 1 210 211 PG0 PE5 . L 6 HOH A 1 301 72 HOH HOH . L 6 HOH A 2 302 51 HOH HOH . L 6 HOH A 3 303 48 HOH HOH . L 6 HOH A 4 304 40 HOH HOH . L 6 HOH A 5 305 21 HOH HOH . L 6 HOH A 6 306 26 HOH HOH . L 6 HOH A 7 307 14 HOH HOH . L 6 HOH A 8 308 73 HOH HOH . L 6 HOH A 9 309 56 HOH HOH . L 6 HOH A 10 310 34 HOH HOH . L 6 HOH A 11 311 27 HOH HOH . L 6 HOH A 12 312 5 HOH HOH . L 6 HOH A 13 313 25 HOH HOH . L 6 HOH A 14 314 3 HOH HOH . L 6 HOH A 15 315 9 HOH HOH . L 6 HOH A 16 316 29 HOH HOH . L 6 HOH A 17 317 28 HOH HOH . L 6 HOH A 18 318 18 HOH HOH . L 6 HOH A 19 319 13 HOH HOH . L 6 HOH A 20 320 49 HOH HOH . L 6 HOH A 21 321 23 HOH HOH . L 6 HOH A 22 322 37 HOH HOH . L 6 HOH A 23 323 42 HOH HOH . L 6 HOH A 24 324 53 HOH HOH . L 6 HOH A 25 325 46 HOH HOH . L 6 HOH A 26 326 17 HOH HOH . L 6 HOH A 27 327 16 HOH HOH . L 6 HOH A 28 328 11 HOH HOH . L 6 HOH A 29 329 1 HOH HOH . L 6 HOH A 30 330 12 HOH HOH . L 6 HOH A 31 331 69 HOH HOH . L 6 HOH A 32 332 70 HOH HOH . L 6 HOH A 33 333 2 HOH HOH . L 6 HOH A 34 334 8 HOH HOH . L 6 HOH A 35 335 19 HOH HOH . L 6 HOH A 36 336 35 HOH HOH . L 6 HOH A 37 337 38 HOH HOH . L 6 HOH A 38 338 74 HOH HOH . L 6 HOH A 39 339 24 HOH HOH . L 6 HOH A 40 340 30 HOH HOH . L 6 HOH A 41 341 57 HOH HOH . L 6 HOH A 42 342 47 HOH HOH . L 6 HOH A 43 343 66 HOH HOH . L 6 HOH A 44 344 6 HOH HOH . L 6 HOH A 45 345 75 HOH HOH . L 6 HOH A 46 346 50 HOH HOH . L 6 HOH A 47 347 20 HOH HOH . L 6 HOH A 48 348 31 HOH HOH . L 6 HOH A 49 349 7 HOH HOH . L 6 HOH A 50 350 33 HOH HOH . L 6 HOH A 51 351 15 HOH HOH . L 6 HOH A 52 352 22 HOH HOH . L 6 HOH A 53 353 10 HOH HOH . L 6 HOH A 54 354 60 HOH HOH . L 6 HOH A 55 355 45 HOH HOH . L 6 HOH A 56 356 43 HOH HOH . L 6 HOH A 57 357 4 HOH HOH . L 6 HOH A 58 358 52 HOH HOH . L 6 HOH A 59 359 61 HOH HOH . L 6 HOH A 60 360 44 HOH HOH . L 6 HOH A 61 361 65 HOH HOH . L 6 HOH A 62 362 36 HOH HOH . L 6 HOH A 63 363 32 HOH HOH . L 6 HOH A 64 364 71 HOH HOH . L 6 HOH A 65 365 68 HOH HOH . L 6 HOH A 66 366 67 HOH HOH . L 6 HOH A 67 367 54 HOH HOH . L 6 HOH A 68 368 55 HOH HOH . L 6 HOH A 69 369 62 HOH HOH . L 6 HOH A 70 370 41 HOH HOH . L 6 HOH A 71 371 63 HOH HOH . L 6 HOH A 72 372 59 HOH HOH . L 6 HOH A 73 373 64 HOH HOH . L 6 HOH A 74 374 58 HOH HOH . L 6 HOH A 75 375 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 PG0 . . . K 5 159.796 127.081 23.225 1 50.19 ? C5 PG0 210 A 1 HETATM 2 O O2 PG0 . . . K 5 160.653 127.588 24.22 1 46.45 ? O2 PG0 210 A 1 HETATM 3 C C4 PG0 . . . K 5 161.842 128.154 23.74 1 40.54 ? C4 PG0 210 A 1 HETATM 4 C C3 PG0 . . . K 5 161.649 129.643 23.486 1 41.4 ? C3 PG0 210 A 1 HETATM 5 O O1 PG0 . . . K 5 162.215 130.001 22.253 1 48.63 ? O1 PG0 210 A 1 HETATM 6 C C2 PG0 . . . K 5 161.371 130.739 21.413 1 48.14 ? C2 PG0 210 A 1 HETATM 7 C C1 PG0 . . . K 5 162.148 131.099 20.149 1 45.22 ? C1 PG0 210 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #