data_6YOU # _model_server_result.job_id oNXH5tdqNa84BF22kovrBw _model_server_result.datetime_utc '2024-10-20 12:32:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6you # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6YOU # _exptl.entry_id 6YOU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 146.149 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description pyrido[3,2-d]pyrimidin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6YOU _cell.length_a 51.895 _cell.length_b 71.446 _cell.length_c 97.445 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YOU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PHE 141 A PHE 138 1_555 A N SEP 142 A SEP 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C SEP 142 A SEP 139 1_555 A N GLU 143 A GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C TRP 199 A TRP 196 1_555 A N TPO 200 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C TPO 200 A TPO 197 1_555 A N LEU 201 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 A C VAL 340 A VAL 337 1_555 A N SEP 341 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C SEP 341 A SEP 338 1_555 A N ILE 342 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C7 H6 N4' _chem_comp.formula_weight 146.149 _chem_comp.id P4Q _chem_comp.mon_nstd_flag . _chem_comp.name pyrido[3,2-d]pyrimidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C5 P4Q doub 237 n y C4 C3 P4Q sing 238 n y C5 N3 P4Q sing 239 n y C3 C2 P4Q doub 240 n y N3 C6 P4Q doub 241 n y C2 C6 P4Q sing 242 n y C2 N2 P4Q sing 243 n y C6 C P4Q sing 244 n y N2 C1 P4Q doub 245 n y C N P4Q sing 246 n n C N1 P4Q doub 247 n y C1 N1 P4Q sing 248 n y C4 H1 P4Q sing 249 n n C3 H2 P4Q sing 250 n n C1 H3 P4Q sing 251 n n N H4 P4Q sing 252 n n N H5 P4Q sing 253 n n C5 H6 P4Q sing 254 n n # _atom_sites.entry_id 6YOU _atom_sites.fract_transf_matrix[1][1] 0.01927 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013997 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P4Q A 1 401 1 P4Q L54 . C 3 HOH A 1 501 189 HOH HOH . C 3 HOH A 2 502 124 HOH HOH . C 3 HOH A 3 503 141 HOH HOH . C 3 HOH A 4 504 161 HOH HOH . C 3 HOH A 5 505 115 HOH HOH . C 3 HOH A 6 506 132 HOH HOH . C 3 HOH A 7 507 151 HOH HOH . C 3 HOH A 8 508 174 HOH HOH . C 3 HOH A 9 509 70 HOH HOH . C 3 HOH A 10 510 153 HOH HOH . C 3 HOH A 11 511 63 HOH HOH . C 3 HOH A 12 512 87 HOH HOH . C 3 HOH A 13 513 195 HOH HOH . C 3 HOH A 14 514 19 HOH HOH . C 3 HOH A 15 515 25 HOH HOH . C 3 HOH A 16 516 30 HOH HOH . C 3 HOH A 17 517 180 HOH HOH . C 3 HOH A 18 518 165 HOH HOH . C 3 HOH A 19 519 108 HOH HOH . C 3 HOH A 20 520 4 HOH HOH . C 3 HOH A 21 521 127 HOH HOH . C 3 HOH A 22 522 221 HOH HOH . C 3 HOH A 23 523 159 HOH HOH . C 3 HOH A 24 524 86 HOH HOH . C 3 HOH A 25 525 52 HOH HOH . C 3 HOH A 26 526 94 HOH HOH . C 3 HOH A 27 527 51 HOH HOH . C 3 HOH A 28 528 191 HOH HOH . C 3 HOH A 29 529 206 HOH HOH . C 3 HOH A 30 530 217 HOH HOH . C 3 HOH A 31 531 213 HOH HOH . C 3 HOH A 32 532 176 HOH HOH . C 3 HOH A 33 533 36 HOH HOH . C 3 HOH A 34 534 135 HOH HOH . C 3 HOH A 35 535 171 HOH HOH . C 3 HOH A 36 536 10 HOH HOH . C 3 HOH A 37 537 162 HOH HOH . C 3 HOH A 38 538 125 HOH HOH . C 3 HOH A 39 539 33 HOH HOH . C 3 HOH A 40 540 8 HOH HOH . C 3 HOH A 41 541 120 HOH HOH . C 3 HOH A 42 542 131 HOH HOH . C 3 HOH A 43 543 164 HOH HOH . C 3 HOH A 44 544 111 HOH HOH . C 3 HOH A 45 545 77 HOH HOH . C 3 HOH A 46 546 50 HOH HOH . C 3 HOH A 47 547 11 HOH HOH . C 3 HOH A 48 548 187 HOH HOH . C 3 HOH A 49 549 112 HOH HOH . C 3 HOH A 50 550 16 HOH HOH . C 3 HOH A 51 551 12 HOH HOH . C 3 HOH A 52 552 85 HOH HOH . C 3 HOH A 53 553 82 HOH HOH . C 3 HOH A 54 554 34 HOH HOH . C 3 HOH A 55 555 148 HOH HOH . C 3 HOH A 56 556 74 HOH HOH . C 3 HOH A 57 557 83 HOH HOH . C 3 HOH A 58 558 64 HOH HOH . C 3 HOH A 59 559 198 HOH HOH . C 3 HOH A 60 560 68 HOH HOH . C 3 HOH A 61 561 90 HOH HOH . C 3 HOH A 62 562 32 HOH HOH . C 3 HOH A 63 563 2 HOH HOH . C 3 HOH A 64 564 175 HOH HOH . C 3 HOH A 65 565 67 HOH HOH . C 3 HOH A 66 566 45 HOH HOH . C 3 HOH A 67 567 130 HOH HOH . C 3 HOH A 68 568 56 HOH HOH . C 3 HOH A 69 569 97 HOH HOH . C 3 HOH A 70 570 110 HOH HOH . C 3 HOH A 71 571 101 HOH HOH . C 3 HOH A 72 572 96 HOH HOH . C 3 HOH A 73 573 57 HOH HOH . C 3 HOH A 74 574 41 HOH HOH . C 3 HOH A 75 575 154 HOH HOH . C 3 HOH A 76 576 196 HOH HOH . C 3 HOH A 77 577 42 HOH HOH . C 3 HOH A 78 578 169 HOH HOH . C 3 HOH A 79 579 140 HOH HOH . C 3 HOH A 80 580 227 HOH HOH . C 3 HOH A 81 581 121 HOH HOH . C 3 HOH A 82 582 202 HOH HOH . C 3 HOH A 83 583 155 HOH HOH . C 3 HOH A 84 584 48 HOH HOH . C 3 HOH A 85 585 22 HOH HOH . C 3 HOH A 86 586 133 HOH HOH . C 3 HOH A 87 587 71 HOH HOH . C 3 HOH A 88 588 14 HOH HOH . C 3 HOH A 89 589 114 HOH HOH . C 3 HOH A 90 590 76 HOH HOH . C 3 HOH A 91 591 31 HOH HOH . C 3 HOH A 92 592 197 HOH HOH . C 3 HOH A 93 593 49 HOH HOH . C 3 HOH A 94 594 93 HOH HOH . C 3 HOH A 95 595 119 HOH HOH . C 3 HOH A 96 596 185 HOH HOH . C 3 HOH A 97 597 146 HOH HOH . C 3 HOH A 98 598 228 HOH HOH . C 3 HOH A 99 599 9 HOH HOH . C 3 HOH A 100 600 6 HOH HOH . C 3 HOH A 101 601 188 HOH HOH . C 3 HOH A 102 602 46 HOH HOH . C 3 HOH A 103 603 66 HOH HOH . C 3 HOH A 104 604 92 HOH HOH . C 3 HOH A 105 605 229 HOH HOH . C 3 HOH A 106 606 3 HOH HOH . C 3 HOH A 107 607 113 HOH HOH . C 3 HOH A 108 608 205 HOH HOH . C 3 HOH A 109 609 5 HOH HOH . C 3 HOH A 110 610 128 HOH HOH . C 3 HOH A 111 611 7 HOH HOH . C 3 HOH A 112 612 105 HOH HOH . C 3 HOH A 113 613 235 HOH HOH . C 3 HOH A 114 614 204 HOH HOH . C 3 HOH A 115 615 210 HOH HOH . C 3 HOH A 116 616 157 HOH HOH . C 3 HOH A 117 617 190 HOH HOH . C 3 HOH A 118 618 24 HOH HOH . C 3 HOH A 119 619 69 HOH HOH . C 3 HOH A 120 620 47 HOH HOH . C 3 HOH A 121 621 147 HOH HOH . C 3 HOH A 122 622 81 HOH HOH . C 3 HOH A 123 623 107 HOH HOH . C 3 HOH A 124 624 129 HOH HOH . C 3 HOH A 125 625 223 HOH HOH . C 3 HOH A 126 626 95 HOH HOH . C 3 HOH A 127 627 136 HOH HOH . C 3 HOH A 128 628 21 HOH HOH . C 3 HOH A 129 629 138 HOH HOH . C 3 HOH A 130 630 80 HOH HOH . C 3 HOH A 131 631 117 HOH HOH . C 3 HOH A 132 632 84 HOH HOH . C 3 HOH A 133 633 98 HOH HOH . C 3 HOH A 134 634 91 HOH HOH . C 3 HOH A 135 635 20 HOH HOH . C 3 HOH A 136 636 166 HOH HOH . C 3 HOH A 137 637 15 HOH HOH . C 3 HOH A 138 638 116 HOH HOH . C 3 HOH A 139 639 17 HOH HOH . C 3 HOH A 140 640 62 HOH HOH . C 3 HOH A 141 641 134 HOH HOH . C 3 HOH A 142 642 18 HOH HOH . C 3 HOH A 143 643 222 HOH HOH . C 3 HOH A 144 644 100 HOH HOH . C 3 HOH A 145 645 13 HOH HOH . C 3 HOH A 146 646 58 HOH HOH . C 3 HOH A 147 647 73 HOH HOH . C 3 HOH A 148 648 150 HOH HOH . C 3 HOH A 149 649 216 HOH HOH . C 3 HOH A 150 650 184 HOH HOH . C 3 HOH A 151 651 177 HOH HOH . C 3 HOH A 152 652 44 HOH HOH . C 3 HOH A 153 653 200 HOH HOH . C 3 HOH A 154 654 43 HOH HOH . C 3 HOH A 155 655 181 HOH HOH . C 3 HOH A 156 656 232 HOH HOH . C 3 HOH A 157 657 218 HOH HOH . C 3 HOH A 158 658 35 HOH HOH . C 3 HOH A 159 659 172 HOH HOH . C 3 HOH A 160 660 65 HOH HOH . C 3 HOH A 161 661 123 HOH HOH . C 3 HOH A 162 662 192 HOH HOH . C 3 HOH A 163 663 29 HOH HOH . C 3 HOH A 164 664 75 HOH HOH . C 3 HOH A 165 665 193 HOH HOH . C 3 HOH A 166 666 208 HOH HOH . C 3 HOH A 167 667 179 HOH HOH . C 3 HOH A 168 668 28 HOH HOH . C 3 HOH A 169 669 23 HOH HOH . C 3 HOH A 170 670 143 HOH HOH . C 3 HOH A 171 671 145 HOH HOH . C 3 HOH A 172 672 27 HOH HOH . C 3 HOH A 173 673 88 HOH HOH . C 3 HOH A 174 674 163 HOH HOH . C 3 HOH A 175 675 103 HOH HOH . C 3 HOH A 176 676 214 HOH HOH . C 3 HOH A 177 677 186 HOH HOH . C 3 HOH A 178 678 182 HOH HOH . C 3 HOH A 179 679 152 HOH HOH . C 3 HOH A 180 680 59 HOH HOH . C 3 HOH A 181 681 53 HOH HOH . C 3 HOH A 182 682 203 HOH HOH . C 3 HOH A 183 683 37 HOH HOH . C 3 HOH A 184 684 142 HOH HOH . C 3 HOH A 185 685 109 HOH HOH . C 3 HOH A 186 686 126 HOH HOH . C 3 HOH A 187 687 156 HOH HOH . C 3 HOH A 188 688 212 HOH HOH . C 3 HOH A 189 689 40 HOH HOH . C 3 HOH A 190 690 122 HOH HOH . C 3 HOH A 191 691 158 HOH HOH . C 3 HOH A 192 692 102 HOH HOH . C 3 HOH A 193 693 211 HOH HOH . C 3 HOH A 194 694 230 HOH HOH . C 3 HOH A 195 695 173 HOH HOH . C 3 HOH A 196 696 104 HOH HOH . C 3 HOH A 197 697 224 HOH HOH . C 3 HOH A 198 698 54 HOH HOH . C 3 HOH A 199 699 144 HOH HOH . C 3 HOH A 200 700 72 HOH HOH . C 3 HOH A 201 701 226 HOH HOH . C 3 HOH A 202 702 234 HOH HOH . C 3 HOH A 203 703 139 HOH HOH . C 3 HOH A 204 704 215 HOH HOH . C 3 HOH A 205 705 201 HOH HOH . C 3 HOH A 206 706 209 HOH HOH . C 3 HOH A 207 707 194 HOH HOH . C 3 HOH A 208 708 167 HOH HOH . C 3 HOH A 209 709 199 HOH HOH . C 3 HOH A 210 710 240 HOH HOH . C 3 HOH A 211 711 183 HOH HOH . C 3 HOH A 212 712 207 HOH HOH . C 3 HOH A 213 713 238 HOH HOH . C 3 HOH A 214 714 89 HOH HOH . C 3 HOH A 215 715 78 HOH HOH . C 3 HOH A 216 716 137 HOH HOH . C 3 HOH A 217 717 237 HOH HOH . C 3 HOH A 218 718 160 HOH HOH . C 3 HOH A 219 719 149 HOH HOH . C 3 HOH A 220 720 79 HOH HOH . C 3 HOH A 221 721 220 HOH HOH . C 3 HOH A 222 722 26 HOH HOH . C 3 HOH A 223 723 225 HOH HOH . C 3 HOH A 224 724 99 HOH HOH . C 3 HOH A 225 725 118 HOH HOH . C 3 HOH A 226 726 61 HOH HOH . C 3 HOH A 227 727 168 HOH HOH . C 3 HOH A 228 728 60 HOH HOH . C 3 HOH A 229 729 38 HOH HOH . C 3 HOH A 230 730 170 HOH HOH . C 3 HOH A 231 731 239 HOH HOH . C 3 HOH A 232 732 178 HOH HOH . C 3 HOH A 233 733 236 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 P4Q . . . B 2 11.894 3.252 18.855 1 22.63 ? C4 P4Q 401 A 1 HETATM 2 C C3 P4Q . . . B 2 12.677 2.177 19.156 1 27.96 ? C3 P4Q 401 A 1 HETATM 3 C C2 P4Q . . . B 2 14.004 2.392 19.578 1 23.53 ? C2 P4Q 401 A 1 HETATM 4 C C1 P4Q . . . B 2 15.994 1.624 20.335 1 22.07 ? C1 P4Q 401 A 1 HETATM 5 N N P4Q . . . B 2 16.338 5.128 20.171 1 26.35 ? N P4Q 401 A 1 HETATM 6 C C P4Q . . . B 2 15.814 3.905 20.098 1 22.16 ? C P4Q 401 A 1 HETATM 7 C C5 P4Q . . . B 2 12.432 4.532 18.974 1 25.2 ? C5 P4Q 401 A 1 HETATM 8 C C6 P4Q . . . B 2 14.467 3.724 19.656 1 27.21 ? C6 P4Q 401 A 1 HETATM 9 N N1 P4Q . . . B 2 16.558 2.83 20.434 1 17.31 ? N1 P4Q 401 A 1 HETATM 10 N N2 P4Q . . . B 2 14.781 1.322 19.927 1 24.67 ? N2 P4Q 401 A 1 HETATM 11 N N3 P4Q . . . B 2 13.673 4.791 19.356 1 31.47 ? N3 P4Q 401 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #